EMLSAT00000005276, EMLSAT00000005276-701123 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005276
Unique NameEMLSAT00000005276-701123
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2821supercontigLSalAtl2s2821:6099..8923 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005276 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005276EMLSAG00000005276-688042Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023059EMLSAE00000023059-731987Lepeophtheirus salmonisexon
EMLSAE00000023060EMLSAE00000023060-731988Lepeophtheirus salmonisexon
EMLSAE00000023061EMLSAE00000023061-731989Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768706auto768706Lepeophtheirus salmonispolypeptide
EMLSAP00000005276EMLSAP00000005276Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005276

>EMLSAP00000005276 ID=EMLSAP00000005276|Name=EMLSAP00000005276|organism=Lepeophtheirus salmonis|type=polypeptide|length=158bp
MSRGNRDRNYNCKVYVGNLGDNASKHELEDVFRRYGKVRSVWVARNPPGF
AFVEFEDERDAEDASKALDGSRICGVRATVEMSSRKKGIVGSVVEIIDED
MIVXGPLXLEDGXIEVKEPAIEEDVIHEHPQGIDRFPGKEIIKLLYIFDD
NYSTSVLF
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mRNA from alignment at LSalAtl2s2821:6099..8923+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005276-701123 ID=EMLSAT00000005276-701123|Name=EMLSAT00000005276|organism=Lepeophtheirus salmonis|type=mRNA|length=2825bp|location=Sequence derived from alignment at LSalAtl2s2821:6099..8923+ (Lepeophtheirus salmonis)
AAAGGAAGTGTAGAAAGTTTCATCGTAGAAATGTAAGTGAGAAATCGTCA
ATCTGTATCCTTTCTCTTGTATCCTCCTTAAGAGCCGGCCTGAGCTTAGA
GCTAGCCTCCCTCACTCAGCTCAACTACTCTTTAACAAGATAAAGCTTTA
AAGGTAGAAGAGAAGTAGAACTTAGGGAATCATAACAAAAGAAAAGGAAA
GAGTCTTCAACTTCATAATAATTATTAGGAGTCATATAGGAAAAAGGAAT
CAATCCCCCATCTTCTTTAAAGAATATATCAAGGTAATATGCTGCCAATA
ATCAAATCACAAAGTAATTATAATATCTAGGTTGTTAGTCTCTCTTATTG
TCTTTTATTTTATCCCAATTTTGTAGTTTTAAATATGTTTTGTTCTTTCA
TTTTTATTCAAAAAATTGTAAAGTCATTATTTAACATTAATTATTATGAT
ACGATCCAATTGGATTTTCGATCAAAGGMCTCCGAGTTGTAGCCAGTCCA
CATGTATGCATTAATAATAAACTTAAAAACTCATTAATTATTTTGCGACT
TATTTACATATATAATAAAATAGCTCCTTGAGTTTTATGTCAAATCAAAG
GGGTTTTCCTTCATTTTATGACTTTCTTCCTTAAGGCTTTTTTATTGAAA
TAATGATACGGAAATCATCATTTTCATTTATTTTTCATTATTATTATTAT
TTTTGTATTTATTAATTATTTTTTTTATTCACTTCTTCAATAATGTTTTT
TAACTTTCAGAATTTATTTATTTCTTATAAAAACTTCCATCATCGATTTC
TTCACTCTTCCGTCATTTGATCCATGATCTTCGTATAATTTTCGTTTAAA
AAAAATTAGATATGCATGCTAATCCGTCATCATTTAAAAGGATACTTCTC
CCTTCCGACAATTACACACATTCTACTACACAAACTCATGATTTGGAAGG
TTTTGTTATATGTCAAAATTTATATTTTTCTTCGGCCTTCAGATGATGGA
TCATTTTATTTCATTTTTCCCTTCTTTAATCCTCGATGATTTTCTCAATG
ATTTTATTCCACATACACACACACACATCCAAGTTTTTAATTTTGCTGTT
TCGTCGCTCCGCCATTTCTTTTCCGCGCATATCCTGGTAAACCAGGCTAA
TCAGTCATACATACATAGTAGCAATCGACTCGTTTTTTACAGCTCTAATA
TATTACCGATTAAAAGACCCAAAACTTCGAATTCCCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGTATATATTTATATATATACATACATATGTTAATTGTCTG
ATATATTAGCAAAAAAGGAATCCAATTTTAACCTTCTCTCTCCTTAGCAT
CAAACGTGAAAATGAGTCGAGGAAACAGGGATAGAAATTATAATTGTAAA
GTATATGTGGGTAATTTGGGTGATAATGCATCCAAGCATGAACTTGAGGA
TGTATTCCGTCGCTATGGTAAAGTTCGAAGTGTGTGGGTTGCTAGAAACC
CTCCAGGCTTTGCTTTTGTTGAATTTGAAGACGAGAGGGATGCTGAGGAC
GCATCCAAGGCATTAGATGGATCTCGAATTTGCGGAGTTAGAGCAACAGT
AATAATAATTACTGATTTTTAACTCATCAAATAAAATAATGAAACTCTCT
TCCTTATAGGTTGAGATGTCAAGTCGGAAAAAGGGAATCGTCGGGTCGGT
GGTAGAGATTATCGACGAAGATATGATAGTGGMAGGMCCTCTTCKTCTGG
AAGACGGGNTGATAGAAGTAAAAGAACCAGCAATCGAGGAAGACGTGATT
CACGAACACCCTCAAGGGATCGATCGTTTTCCAGGGAAAGAAATAATTAA
ATTATTGTATATTTTTGATGACAATTACTCAACCAGTGTATTATTTTAAG
CCTATTTCGTCATTAGGATATCATGTTTACTAATATCTCATTGCTATATT
GTATCGTGAATGTATAAACAGTTATTTATTGTGTTAGTCCATCGATTATT
CAAGTAATTAAGTAAGTAAGTATTGCATATTTCTGTGTATTTCATTCCTT
AAAAACACAATAATATATTATAATATCAAATGCCCAATAATGATATTTAT
TCATTACAATCGTAAATATAAATATATATAATTATATAAAATAAAAAGTA
AAAAAAGACAGTGTGAATTAATAAATTAATTGTAGACGCATCAGACTAAG
GAAGATTCCATGATGATTGCAAATTAATTCTAGAAGGCCTTTGAGAACAT
CTTCCTATGTGACCATGCATCTTATGTTTGGAATCAAAACCTCTTTGGCA
ATATGGACAAAAACTCTCAGGAGAAGAGGACACAGTAGTGTTAGTACTTG
TAATATTTGGTCGGGATTTGTGTGCTGTATGTCGGTGATTCTGCATCTTG
TGCCGAGATGCAAATTCTTTATGACAGACGMCGCACTTGGTTGGGACAGG
GAAATGAATATCTTCGATATGTCGATTCAATTTGACAAAAGATTTGTTAC
ACCAAGGACATATTCCTTGACTAGTAGATGCCGTACCTGAAAAGAGGAAT
AAAACAAAAATTGGGATTCTGTGTGACTGATTGATTCCACAACAGGGTTC
TAAAAAGGAGCTATTGAGTATTTTAAAAAATCATCAAATTAAAAACAAGG
AGGATAGGGATTTGGTTTGGAGTGAAGGACGATGACATGCAAATAAGTAA
CTAAGCCTTTTAAAATACCTTATAGTGCGAATTGGCTATTACGTAAATGA
ATGAAATATGTACAACGAATGTTTG
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