EMLSAT00000005311, EMLSAT00000005311-701158 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005311
Unique NameEMLSAT00000005311-701158
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s283supercontigLSalAtl2s283:445721..453151 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005311 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005311EMLSAG00000005311-688077Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023194EMLSAE00000023194-732122Lepeophtheirus salmonisexon
EMLSAE00000023195EMLSAE00000023195-732123Lepeophtheirus salmonisexon
EMLSAE00000023196EMLSAE00000023196-732124Lepeophtheirus salmonisexon
EMLSAE00000023197EMLSAE00000023197-732125Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777743auto777743Lepeophtheirus salmonispolypeptide
EMLSAP00000005311EMLSAP00000005311Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005311

>EMLSAP00000005311 ID=EMLSAP00000005311|Name=EMLSAP00000005311|organism=Lepeophtheirus salmonis|type=polypeptide|length=1245bp
MESDIKNEIHKNVFPKLVDVESKTVNFYSEIHDKIVPSINDIQLKYNEEL
IPRIQSFENKYVLEVDEKLWPHVNKMHDKIYEDMDXKFXPLVHELREIEP
IVRELESQILISREKVNSISPKIDEIQEIISNSQNEINSKIWPEINSLQS
SLNILDPDVTQIKEKLVDTQNIVNNEIWPHIDKLSLTQTEQFNLSVQNIE
SKYDIEIHEKLWPFIKDMDKDLKLELQENVWPAIDDLRLVKPFISESTSQ
FNLINEEIEVLKKITDNSTNEISNKIWPKITQISVEQNEQVSVNIQNIEN
KFNIEINDKLWPYVQEMNTFLKDEVEGKLIPHVQELDDLRPQLNDVRETV
KDVNAKXEKSLDEIFNSLWPHVKSLNIKLSDDIIQNIKNLEIKFDTEIFK
KMWPFINDMDRDIKKEIHEGMWPSMKELQEYIPVIKEMETKLTSVTSQLE
TVELKSEKSHYEIVEYLRPNVETVTMRIDSEVMPKVKDVETILSLEIFEK
VWPFIRELDDRVTKDLYEKLWPQVNEIVPKIKDVHARVAFADPGDLKNKI
ESINISIDDRFQEIYPKIKDMTDKISFLEPVAYGTAEKLDIFVPKLDSLE
LRIDERTSKTVQEVNLVVNERFGLLEPGLAKFDQRLTILEPRVSETIEKL
SIMEPRSSELGEKLTFLEKQNLVLRLLEIETKMSAMEPKSDDLEYRLADI
EPQLLDLSKLVKENVEPLSSELEKHIQNNVDPTLKRLESEFNEMILSHTS
FKQQNDIIESQIIPKIRDEINVEISNINIEIKERILPKIFSLEEQHIMQI
EKVHYVEALQDRVNLLDDQKQRSEALIKESLEDAVKKNRDSFESLKQSLI
IKMEELDNNDKDHWDKLKALEIDTIECKEQLIKSSVDYMNISKILFDDVR
PELDVTSTKCSELFQELYKLTERVSESSVSVKDVQTSSRVIQEDLNERYR
EIEKRLYNELSLNSEKLLTVRNDVLDFCDKELFVVKGEINEKIIMIDSLC
KSNESHVENLRGLNTKLLDQMKEQLQREIIKQETLISEIKTEASVRLDTI
IQELKDSSDKIVQLDQGLQQSDVKIHLMEQEGRESERNVRGIRTDFEDCK
NNVWNVMTQISAALRGNTLVLKSEGLALEHQPDAFGVYRLIDTFNNRPAY
KQDEGENFIYYNGGSKSWMVGTRIGHNYGWARVPNNTSHWAPFNGWEYFT
SDRKIYESNDRTLRLEALTDAEEADSSIQIIREKELTKNESIEKN
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mRNA from alignment at LSalAtl2s283:445721..453151-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005311-701158 ID=EMLSAT00000005311-701158|Name=EMLSAT00000005311|organism=Lepeophtheirus salmonis|type=mRNA|length=7431bp|location=Sequence derived from alignment at LSalAtl2s283:445721..453151- (Lepeophtheirus salmonis)
ATGGAAAGTGATATCAAAAATGAGATCCATAAGAATGTATTTCCAAAACT TGTGGATGTTGAGTCTAAGACTGTCAACTTTTATTCTGAAATCCATGACA AGATTGTACCTTCTATCAATGATATTCAATTGAAGTACAATGAAGAGTTG ATTCCTCGTATTCAATCGTTTGAAAATAAATATGTTTTAGAAGTTGACGA GAAGCTGTGGCCTCATGTTAATAAAATGCATGATAAAATATATGAAGATA TGGATARTAAGTTTTYTCCMCTTGTACATGAATTAAGGGAAATTGAACCC ATTGTTCGTGAACTTGAATCTCAAATTTTAATATCAAGGGAGAAAGTTAA TTCAATTTCTCCAAAGATTGATGAAATCCAAGAAATTATTTCTAATTCTC AAAATGAAATTAATTCTAAGATATGGCCAGAAATTAATAGTTTGCAATCT TCACTAAATATCCTTGATCCTGATGTTACTCAAATAAAAGAGAAGTTAGT GGACACTCAAAATATTGTCAATAACGAAATTTGGCCGCATATTGATAAAC TTAGTTTAACTCAAACTGAACAATTTAACCTTTCTGTGCAGAATATTGAA AGTAAGTATGATATTGAAATTCACGAAAAACTTTGGCCATTTATTAAAGA TATGGATAAGGATTTGAAACTTGAACTTCAAGAAAATGTTTGGCCTGCCA TTGATGATCTCCGATTGGTTAAACCATTTATATCTGAATCAACATCACAA TTTAATTTGATTAATGAAGAAATAGAAGTTTTGAAGAAAATAACAGATAA TTCTACTAATGAAATCTCCAATAAGATTTGGCCCAAAATCACACAAATAA GCGTTGAGCAAAATGAGCAAGTCTCTGTAAACATCCAAAATATTGAGAAC AAGTTTAACATTGAAATCAATGACAAATTATGGCCTTATGTTCAAGAAAT GAATACTTTCTTGAAAGACGAAGTAGAAGGTAAATTGATACCACATGTTC AAGAATTGGATGATTTGAGACCTCAGCTCAATGATGTTAGGGAGACAGTT AAGGATGTCAATGCTAAGGYAGAAAAATCTCTTGATGAAATTTTCAACTC TCTTTGGCCTCATGTCAAGAGTTTGAATATCAAATTATCTGATGATATCA TTCAAAATATTAAGAATCTTGAAATTAAGTTTGACACCGAAATTTTTAAG AAAATGTGGCCATTTATTAATGATATGGACCGAGATATTAAAAAGGAGAT ACATGAAGGTATGTGGCCCAGTATGAAGGAATTACAAGAATATATTCCAG TCATAAAAGAAATGGAAACTAAATTAACATCAGTTACATCTCAGCTTGAA ACTGTGGAATTAAAATCTGAAAAATCTCATTATGAAATTGTTGAATATTT GCGTCCTAACGTTGAAACTGTAACCATGAGAATCGATTCTGAAGTAATGC CTAAAGTAAAGGATGTGGAAACTATATTATCACTTGAAATATTTGAAAAG GTTTGGCCATTTATCAGAGAACTTGACGATAGAGTTACAAAGGATTTGTA TGAAAAGTTGTGGCCTCAGGTAAACGAAATTGTACCAAAGATCAAGGATG TTCATGCCCGTGTTGCATTTGCAGATCCAGGGGATCTCAAAAACAAAATT GAAAGTATCAATATTAGTATTGATGATAGATTCCAAGAAATATATCCCAA GATCAAGGACATGACTGATAAGATATCATTTCTTGAGCCCGTTGCTTATG GTACTGCTGAAAAGCTTGATATCTTTGTTCCAAAACTTGATTCTTTAGAA TTGAGAATTGATGAAAGAACGTCCAAAACTGTTCAAGAAGTTAATTTGGT GGTAAATGAAAGATTTGGCCTACTTGAACCAGGCTTAGCCAAATTTGATC AACGTCTCACAATATTAGAGCCACGCGTATCCGAAACGATAGAAAAACTC TCAATAATGGAACCTAGAAGTTCAGAACTAGGAGAAAAATTGACTTTCCT AGAAAAACAAAACTTAGTTCTTCGTCTTTTAGAGATTGAAACTAAGATGT CAGCCATGGAACCTAAATCTGATGACTTAGAATATAGATTAGCAGATATT GAACCTCAACTCCTCGATTTATCTAAACTTGTAAAGGAAAATGTTGAGCC ACTTTCTTCAGAACTTGAAAAACATATTCAGAATAATGTGGACCCTACTC TTAAACGACTTGAATCAGAGTTTAATGAAATGATTTTAAGCCATACCTCA TTTAAACAGCAGAATGATATAATTGAATCCCAAATTATACCGAAGATAAG AGATGAAATCAACGTAGAAATATCTAACATCAATATTGAAATTAAAGAGA GAATTCTTCCAAAGATATTTTCTCTAGAAGAGCAACATATTATGCAAATA GAAAAAGTGCATTATGTTGAGGCTTTACAAGATAGAGTAAATCTATTAGA CGATCAAAAACAGCGAAGTGAAGCTCTTATCAAAGAATCTTTAGAGGACG CTGTTAAGAAGAACAGAGATTCATTTGAGTCATTGAAACAATCATTAATT ATAAAAATGGAAGAATTAGATAACAATGATAAGGACCATTGGGACAAATT GAAAGCTCTCGAAATTGATACCATAGAATGCAAGGAACAGCTGATCAAGT CAAGTGTCGATTATATGAATATTTCAAAGATTCTATTTGATGATGTTCGG CCTGAACTTGATGTCACATCCACTAAATGTTCAGAGTTATTTCAGGAACT CTATAAATTAACTGAACGAGTCTCAGAGAGCTCTGTATCAGTAAAGGACG TTCAAACTTCATCACGTGTTATACAAGAAGACTTAAATGAAAGATATAGA GAGATAGAAAAGAGGTTATATAATGAATTGTCCCTCAACTCAGAAAAGCT TCTGACTGTTAGGAACGATGTTCTCGATTTCTGTGATAAAGAATTGTTTG TAGTGAAGGGAGAAATCAATGAAAAGATCATCATGATAGATTCTTTGTGC AAGTCCAACGAGTCTCATGTAGAAAACTTGAGAGGTCTGAATACCAAACT TTTGGATCAAATGAAGGAACAACTTCAACGAGAAATAATAAAACAAGAGA CTCTCATCTCAGAAATTAAAACTGAGGCATCTGTTCGCCTTGATACGATT ATTCAGGAATTGAAAGATAGCTCTGATAAAATTGTGCAACTTGATCAAGG ACTTCAACAATCCGATGTCAAAATCCATTTAATGGAACAAGAAGGAAGAG AAAGCGAAAGGAACGTCAGAGGAATTCGTAAGTCATTTTATATTTTATTT AAAACTAATATTATATAGCTAACAATCCTAATAAAAAAAGATAGATATTA CAATTATTACTTTGTTTTTGTTTTAATATTTAAAATTGTATATACTTAAT AAATTGCTTTATTTTTAAGCTTCTTTATAAATACCTAATAAAAGTAATAT GAAACATATTACATCTTGTATATCTCTTGTGTTTTCAAGAGGTTGCGTGA TTTCAAACATTGTTAATCTTTCGCTGCTTTTACTATATTTTAATTTAACC TATTATGTATTTATAACCTGAAACATAACCATGCCTAAATATTTTATCAA TTAACCTCATCACATCTTACTAGTATTGTAGTGGTTTCAATCTTCGATAA TTAATCTATAATTATATTCATCGAAGTTTGAACCAAATGCACACACAAGG AAGTAAAGAAGTTATCTATAGTTTGATAGTGTTTTTTGTTGGTCATTTTA TTTTTTATTTTTTTGTATTTAAAAACATTTATTTGTTATGTTGTCTTTGG GCTGTTTTTTTTATTTTAATTTTTTTTACATTAAAATTTGCTTGGTGTTT GAGTAGATTTGCTTGCTGGGAGGGAAATGATTTCCTAAGTTACTTAGATA GTTTTTAGTTACTATGAGTATAATTTGTAACTTGGGAATGTCTTTTGATC ACAACTAAATAATGAAGGAAATCTACTCCAACATTAGGACAGTAAAAGCT TGAGGTGACTGTGCTTTTTCTTAATTTTCATTCATTAATTTATTTATTTG CACTTGGACGATGATACCACATGCATATCACTTATATTTGTAAATGATTT TATTGCATGATAGATTTTTTTATGATTTTTTAAATCATCTCCAGTATGAA GAGAAGAGAAAAAGTATAGAACCACCTTCCAGTTAATGTTGTAAAATACA TACATCATTCAAAGCTTTTGCTTACACAATTAATTAGAAATACATACATA CATTCATAATATGTAGATGCTTGCCCAGGACTGTACATATTTCATAACAA TGGTTGATATCACACATTCAAAAAAATATTTTTTTTACTGTATTGTGAAA GATATCATATCGTTGGTATTTAACAATGGGTTAATTGGAACTTGAAGTTG ACTTAAAGTAAGAAAAAGAAACAAATACGTAAGACCCCAGCAAAAAGCAA CAAAAAAATCATTTTTTATTCAGTTTTCTTTCGTTTATTGATGTTATTGA ACAACATGTTTAATAGGTAACATTGGTGGCCTGAGAAATTGGATTCGTAG AGCGTGTTGTCTGTGTCCTGGCTCAAGGCATTTTTGTCATTCAAATAATT CAACAACTTCAAGTTCCAATMCCCACCAGCAAACCATTTCCCTATCATCA TCAGTCGAATCATTCTCACATTATTATAGGAACTGATTTCGAAGACTGCA AGAACAACGTATGGAATGTCATGACTCAAATTAGTGCTGCTTTAAGTAAG TGATGCACGAAAAAGTTGTACACCTAACCCATTGACCACAATCATGTATA TTTTCTAATAAATTCTAGGAGGAAATACACTTGTACTTAAATCTGAAGGA CTAGCTCTAGAGCATCAACCTGACGCTTTTGGTGTTTACAGACTAATCGA TACTTTTAACAATAGACCTGCATATAAGCAAGACGAGGGCGAAAACTTTA TTTATTATAACGGAGGATCTAAATCTTGGATGGTTGGAACACGTATTGGA CATAATTATGGATGGGCTCGAGTTCCAAACAATACTAGTCATTGGGCCCC TTTCAATGGATGGGAATATTTCACTTCCGATAGGAAGATCTATGAATCAA ATGATAGAACACTCCGTCTTGAAGCACTTACAGGTACATTTATATATTTG AAATTCTTCATTTTGTTTGTAGTGCTACAATATTTAGTTATTGTAATCGT AATCGTAGTTTTAATCAATAGTTATGTTACTCACGCTTTTTTTTTTTTTG TCTTCTACTTATTTTTTGCGCTCAACCATCTGTTGAGCATATTTGCATAC CTACATACATACTCCAACTACTATCTTCCTGTAAGTGTACATACATTTGT GCATTAATATTAGGGTGACCATATTTTATGTTCCTAGAAATGAAATGCCT TGCTTAGAGGAGAGAGGGGATAATATTTTGAAATCAATAAATTTGAGAAT AAAGTACTAACGATTCTTGTTTTTATTTTTTTTATGAAATATATTTTGGA TTCTTATGTTTCCTTAAATTAAATTAATTTAATTGGCACGCCGACGGACT GGTTGTAAAAAAAAATTATGGTTGGTCACCTTAAATTATATATGTAATTA GATCCCGGATCTTTATATTTATGACATAATAATTGTACATATGTATGTAT GTCTACATATTGACACATCAATTAAATCACACATTATCTATTGGCCTTAT TATTGGAATTTTCCGTCACTCCATAGGAACCGAGACTCGGGTTTTTGGTC GATGGGGTTCAATACCGTGGTGGGCCATTTGCGCTTTACTTTTATTCCCC TTATTGTTCTTCCTTCTTTTTGGCGATCGGAGCAATTCGGGTCTTTTTTC GTCATCTTGCAAAGATCCTTGGACAACGTCGTCAATCAATCCTATATAAT AACCATTAATCACTTAGTATTAATTACAGAGGATGATCAAATCTTCTTCT CCTGTTCCCATGTTTTTCAACCCCAAGTTCTCATGTTCCCCAAATTCATA AATGCTTATGACATTCACTTATCACGAAATCGCACAGGGTAATTATTTTT TTTTGTTTTTTTGTTTCTTTTATTCTTCTTTTTTTTACCTTGTCTTCTTC TTCTATTCCTTTTTTCTATTTCTCMCATTCATTTGAATAGTGTTTTTTTT TTTTTTTTGAAATGTTCAATATTCGAGTAATCTTTTATTGTCTTCAGTCA ATGAAATTTATTATTTCATTTCTTCGTTAACTACCACACTTCTAGTCCTA TTTCTTTTCTTCTCTGTACATATCTACAGCATACATATACCAATATTTCC CTGTCTCTTAAAATATGTGCTTATTATCATTTAGTTACTTCAACCTCTTT ACTTTACTTTAATTGACATTCTGAAGATTCTGCATGATGTTCAGAAGTTC ATTTTGCGTATACGCACTATATACCAAGGGCATCGGAATCAATTCGTAAA CCAATGGCCTCTGGGCTCCCGATTCCTGTGTCCCTACTATTAAGAAATAC TCTATACATGTACTACGTATCCTTTTTTAAATGTATAAAGCCTATTTTTT AGAGTAAGATAAATATGAAATGAAAGAGAGGGAATAGAATTAAAACAACC GTGTAATGCATGTATTATGGAATTAAAATATTTAATGGGGTTGATCTATT TATTTTATGGCATCAAAATAATAATTCTTTAATAAAAAAGTTATTTTAAT TCCTTTCATTTTATAAATATTCTACTCAAGTAAAAAAAGAAAATCGTCCT TGTTTAAAAAAAAGGAAGGAAAAAAAATGAGTACTTGATTCATGTATATG TTAAGTATTCCTTTCTGTAATATACAAATCGTTGGCCCAGAGCGAAAGAG CAACAACTAATTACTTTTTATCAATAATTAGATTTGTTGTTTGTTACAAA CATATTAATTACATATACTTCAGGGGTGTCTGCAGAATTATATTATGTGT TAGGTAGGGAGGGGGGTAGTGCTTAGTTTTTGGATTTTTTTTCCAAAAAA ATATAGAAATTAGAATTATGAAAATTTTTGAAAAAAATTATCAAAAAATA AATTTTATATATTACATTTTTATTTTATTACAATATTATTCACAAAAATT AAATTTTTTGCAAAAAATTTCAAACATCCACAGCTATTCACAAAAAATTA AATTTTTGAAAAATAAATTGGAATTTTAAATATTTGGAACATAAATTGAA TTATTAAATTTCAAAAATTAATTTTTCTAGTAAAAAACAAGAATTCCTTA CTATTGCTCTGGGTCCACTTTTATGAAATTACATATTTCCATTTTTNNNN NATAATCACTTTGTATTTATACTTTTCTATTTCTTTCTTCCATTATTTTA GATGCTGAAGAGGCTGATAGTTCCATCCAGATTATTCGTGAAAAAGAGTT AACCAAGAACGAGTCCATAGAAAAGAATTGA
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