EMLSAT00000005390, EMLSAT00000005390-701237 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005390
Unique NameEMLSAT00000005390-701237
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2906supercontigLSalAtl2s2906:12630..13168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005390 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005390EMLSAG00000005390-688156Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023531EMLSAE00000023531-732459Lepeophtheirus salmonisexon
EMLSAE00000023532EMLSAE00000023532-732460Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769023auto769023Lepeophtheirus salmonispolypeptide
EMLSAP00000005390EMLSAP00000005390Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005390

>EMLSAP00000005390 ID=EMLSAP00000005390|Name=EMLSAP00000005390|organism=Lepeophtheirus salmonis|type=polypeptide|length=143bp
MNTIDHFWSMVWHEKCIAILMLNKLREKGTSQKAWPDFGVPGRPINFLKF
LEVVRESGSLEEDVGPPVVHCSPGIGRSGTFAHIDTSLVLTAKEGPSSVI
LKSILLDLRSYRMDLIQIWGKLKFSHLTIKTSCQPKLSKFCYV
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mRNA from alignment at LSalAtl2s2906:12630..13168+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005390-701237 ID=EMLSAT00000005390-701237|Name=EMLSAT00000005390|organism=Lepeophtheirus salmonis|type=mRNA|length=539bp|location=Sequence derived from alignment at LSalAtl2s2906:12630..13168+ (Lepeophtheirus salmonis)
ATGAACACCATTGATCACTTTTGGTCCATGGTGTGGCATGAAAAGTGTAT
AGCAATTCTTATGCTTAATAAATTGAGAGAGAAAGGCACATCCCAAAAGT
TCAAAATTTTCAATCTGATTCACACAACGACTACATTCTGACGAATCTTC
GGATAACCAATCTTGCTGTCAATGAAGAAATAATGGTTCCGCATTAACAA
AATAGAGCGTGGCCAGATTTTGGAGTTCCTGGCCGTCCAATTAATTTTCT
TAAATTTCTAGAGGTAGTTCGAGAATCAGGTAGTTTAGAAGAAGATGTTG
GACCTCCTGTAGTACATTGCTCCCCTGGTATTGGAAGATCAGGCACTTTT
GCCCATATTGATACTTCTTTAGTATTAACTGCCAAAGAAGGGCCCTCGTC
TGTTATATTAAAATCCATTTTGTTAGACCTACGGTCATATCGTATGGATT
TAATACAAATATGGGGAAAGTTAAAATTTAGCCACCTCACTATTAAAACC
AGCTGCCAGCCCAAATTATCCAAATTTTGTTATGTTTAA
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