EMLSAT00000005400, EMLSAT00000005400-701247 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005400
Unique NameEMLSAT00000005400-701247
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s290supercontigLSalAtl2s290:330552..331727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005400 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005400EMLSAG00000005400-688166Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023560EMLSAE00000023560-732488Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776476auto776476Lepeophtheirus salmonispolypeptide
EMLSAP00000005400EMLSAP00000005400Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005400

>EMLSAP00000005400 ID=EMLSAP00000005400|Name=EMLSAP00000005400|organism=Lepeophtheirus salmonis|type=polypeptide|length=391bp
MEDVKTGHQPLDQNYESREKMDSSLRYSNNNNRLANGYNHLSAQNLGRNH
QLVSSQLHGATGQNDYGHIYNNPKFSIYDHEINNSEEIWDLDSNTVKRYS
VLDSQNVYDPYYYNNYYLQQQNNYDAEWVQIHTPLSVSVTNSTTPSPTNQ
CNISLKNDSKKPKSYQCEPCDKWFTSSGHLKRHYNTTLHRNALRTKDSPL
RNISSNNSPEHSEDRSSSCSSSGLSSSRVISNNTSSISTSHHLPMSTNNA
SSSPDMIGDDYTTYDQYNNLYPTTYNTNNFSYYTPFYSSHSTSNQTLSTN
TLKLQDKILQNSSQQPTVQTPEYRCSDCNKSFNKLCYLKQHNKSFHNGEK
PYKCNQCGKRFPVDVLYQVRKKVFIPFSLSWGTRLRRFNLS
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mRNA from alignment at LSalAtl2s290:330552..331727+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005400-701247 ID=EMLSAT00000005400-701247|Name=EMLSAT00000005400|organism=Lepeophtheirus salmonis|type=mRNA|length=1176bp|location=Sequence derived from alignment at LSalAtl2s290:330552..331727+ (Lepeophtheirus salmonis)
ATGGAGGATGTAAAGACGGGTCATCAACCATTAGATCAAAATTATGAGTC
AAGAGAAAAAATGGATTCTAGTTTACGGTATAGCAACAATAATAACCGCC
TTGCTAATGGATATAATCATTTGTCGGCCCAAAATCTGGGGCGAAATCAC
CAATTAGTTTCTAGTCAATTACATGGAGCTACAGGACAAAATGATTATGG
TCATATCTATAATAACCCAAAGTTTTCTATATATGATCATGAAATTAATA
ATTCTGAAGAAATTTGGGATTTAGATAGTAATACAGTGAAACGCTACAGT
GTATTAGACTCACAAAATGTGTATGACCCTTACTACTATAATAATTATTA
TTTACAGCAGCAAAATAATTATGATGCTGAATGGGTTCAGATACACACTC
CACTCTCTGTATCTGTTACTAATAGCACAACCCCTTCACCTACAAATCAA
TGTAATATTTCCCTTAAAAATGATTCAAAAAAACCTAAATCTTATCAATG
TGAACCTTGTGACAAGTGGTTTACATCTTCGGGTCATTTAAAGCGACATT
ATAACACAACCCTTCATAGAAATGCACTACGCACTAAAGATAGCCCTTTA
AGGAATATATCATCTAATAACTCCCCAGAACATTCTGAGGATCGTTCATC
TTCATGTTCTTCCTCTGGACTCTCTTCATCGAGAGTTATTAGCAATAATA
CGTCATCTATATCTACCTCTCATCATCTTCCAATGAGTACTAATAACGCA
TCATCTTCCCCAGACATGATCGGAGATGACTATACAACATATGATCAATA
TAATAACTTATATCCTACAACATATAATACAAATAATTTTAGTTATTATA
CTCCATTTTATTCTTCCCATTCGACATCAAATCAAACATTATCCACTAAC
ACATTGAAGTTACAGGACAAAATTCTTCAAAATTCTTCACAACAACCAAC
TGTTCAAACACCAGAATATCGATGTTCTGATTGCAATAAGTCCTTTAATA
AATTGTGTTATCTAAAGCAGCATAATAAAAGTTTTCATAATGGTGAAAAA
CCCTATAAATGTAATCAATGTGGTAAAAGGTTTCCTGTTGATGTACTCTA
TCAGGTAAGAAAAAAAGTATTTATTCCTTTTTCCTTGTCCTGGGGCACAA
GGTTAAGAAGATTTAACCTTTCTTAA
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