EMLSAT00000005447, EMLSAT00000005447-701294 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005447
Unique NameEMLSAT00000005447-701294
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s292supercontigLSalAtl2s292:685863..686681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005447 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005447EMLSAG00000005447-688213Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023801EMLSAE00000023801-732729Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779339auto779339Lepeophtheirus salmonispolypeptide
polypeptide-auto779340auto779340Lepeophtheirus salmonispolypeptide
EMLSAP00000005447EMLSAP00000005447Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005447

>EMLSAP00000005447 ID=EMLSAP00000005447|Name=EMLSAP00000005447|organism=Lepeophtheirus salmonis|type=polypeptide|length=272bp
MSTQFNLEEPVSGFSFENARRNLHLQEKGYKSFKTTKTGTTICALIYKDG
IVFGADNRATAGNIIANKFTLKIHELAPNIVACGAGVSADCDKVTELLAS
QLKLHRLETGRQSRVVTAERILTQRLFQYQGHVQSYLILGGVDVSGRYIY
DISAHGCASPKLYAATGSGMLGAMAXLEXRYKVNMTEEEAKELVKDAILA
GIFNDNASGSNVDIAVTRISDGSMEIIRGYAKPNKKGERKNKYTYAKGTT
AILSEVVKPIVIPTPQVQPMET
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mRNA from alignment at LSalAtl2s292:685863..686681+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005447-701294 ID=EMLSAT00000005447-701294|Name=EMLSAT00000005447|organism=Lepeophtheirus salmonis|type=mRNA|length=819bp|location=Sequence derived from alignment at LSalAtl2s292:685863..686681+ (Lepeophtheirus salmonis)
ATGTCAACTCAATTTAATTTGGAAGAGCCCGTCTCTGGATTCAGTTTCGA
GAACGCTCGCCGTAATCTTCACCTGCAAGAAAAGGGTTACAAGTCCTTCA
AGACAACCAAGACGGGGACAACGATCTGTGCCTTAATCTACAAGGATGGA
ATCGTGTTCGGAGCGGATAATCGTGCAACAGCTGGAAATATTATAGCCAA
TAAATTCACTCTCAAAATCCACGAACTCGCCCCTAACATTGTGGCTTGTG
GCGCTGGAGTCTCMGCGGATTGTGACAAAGTGACGGAGCTCCTCGCCTCA
CAACTCAAGCTCCACAGACTCGAGACAGGAAGACAAAGTCGTGTCGTGAC
AGCTGAGCGTATCCTCACTCAGAGGTTGTTTCAATACCAGGGCCATGTCC
AGAGTTATTTGATCCTCGGGGGAGTGGATGTGTCTGGRAGATACATTTAT
GACATTTCCGCCCATGGTTGTGCCTCTCCCAAGCTGTACGCGGCCACGGG
ATCTGGGATGCTGGGTGCTATGGCGGRGCTTGAGAGKCGCTATAAAGTTA
ACATGACGGAGGAAGAAGCAAAGGAACTAGTTAAGGATGCTATTCTGGCA
GGKATCTTTAACGACAACGCATCCGGATCCAATGTTGATATTGCTGTCAC
GAGGATCAGTGATGGATCTATGGAAATCATTAGAGGATACGCCAAACCGA
ACAAGAAAGGAGAGAGGAAAAATAAATATACTTATGCCAAGGGAACAACT
GCAATCTTGAGTGAAGTCGTCAAGCCCATTGTCATTCCAACGCCTCAAGT
CCAACCCATGGAGACATAA
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