EMLSAT00000005460, EMLSAT00000005460-701307 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005460
Unique NameEMLSAT00000005460-701307
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s293supercontigLSalAtl2s293:347791..348598 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005460 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005460EMLSAG00000005460-688226Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023895EMLSAE00000023895-732823Lepeophtheirus salmonisexon
EMLSAE00000023896EMLSAE00000023896-732824Lepeophtheirus salmonisexon
EMLSAE00000023897EMLSAE00000023897-732825Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776670auto776670Lepeophtheirus salmonispolypeptide
EMLSAP00000005460EMLSAP00000005460Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005460

>EMLSAP00000005460 ID=EMLSAP00000005460|Name=EMLSAP00000005460|organism=Lepeophtheirus salmonis|type=polypeptide|length=228bp
MEGWVSAKNVDIHLIKGNPVVHGPDNLIVGHIALEVENVEDAKTKLQEDG
ISYRINSTVPNPTIKNGVVNQIFVRDPDGYYIEFCECASLHEYGKKLEEE
RRTIVSSFSRAVGIKEKFIEIIKRTKERTKFPNEIEDISPDFTPNHPVDE
TKLENLLKRRQVYGDIIGPIEEKELRRLLSFTMNDVPKLIQILKKRNSLA
KEQILVPPAFIETDGRFVQPPVFKMPIS
back to top

mRNA from alignment at LSalAtl2s293:347791..348598+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005460-701307 ID=EMLSAT00000005460-701307|Name=EMLSAT00000005460|organism=Lepeophtheirus salmonis|type=mRNA|length=808bp|location=Sequence derived from alignment at LSalAtl2s293:347791..348598+ (Lepeophtheirus salmonis)
ATGGAGGGGTGGGTCTCAGCTAAAAATGTGGATATTCATTTGATCAAAGG
AAATCCAGTTGTACACGGACCGGACAATTTGATTGTTGGACATATTGCTC
TTGAAGTGGAAAATGTGGAGGATGCAAAAACTAAATTACAAGAGGACGGA
ATATCCTATCGAATAAACTCCACTGTTCCTAATCCTACGATTAAAAATGG
CGTCGTAAATCAGGTGAGAATCTAATCAAAATACATTAATATTGATTTAT
TTACGTTATTTTTATGTAGATATTTGTTCGAGACCCAGACGGTTATTATA
TCGAATTTTGTGAATGTGCTTCTCTCCATGAGTATGGCAAGAAATTGGAG
GAGGAAAGGCGTACTATTGTGAGTTCATTTAGTCGTGCTGTGGGCATTAA
GGAAAAATTCATAGAAATAATTAAAAGAACTAAGGAAAGGACCAAATTCC
CCAATGAAGTAAGACTCAAAATAAATCAAATCCCATTGAAAATAATAAAA
ATCTTGGTTTTTACAATGAATAGATTGAGGACATAAGCCCAGACTTTACT
CCGAATCACCCAGTAGATGAAACTAAATTAGAGAACTTGCTCAAAAGACG
ACAAGTGTATGGGGATATCATAGGGCCCATTGAAGAGAAGGAACTAAGAA
GATTACTCTCATTCACAATGAACGATGTTCCCAAACTTATTCAAATTCTG
AAGAAGAGAAACTCCCTTGCAAAAGAGCAGATCCTTGTTCCTCCAGCCTT
CATTGAGACGGATGGGAGATTTGTGCAGCCTCCAGTCTTTAAAATGCCAA
TTTCATAG
back to top
Add to Basket