|
|
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
|
Gallery Image |
Title |
Gene or target symbol |
Sex/Stage |
Phenotype |
Date |
|
|
5535 |
heat shock factor 1 |
unknown |
No visible phenotype
-Missing- |
01.01.2017 - 10:03
08.01.2017 - 10:14 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s297 | supercontig | LSalAtl2s297:361088..364535 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005535 >EMLSAP00000005535 ID=EMLSAP00000005535|Name=EMLSAP00000005535|organism=Lepeophtheirus salmonis|type=polypeptide|length=392bp
MLPVMEIMLPSVSSNVPAFLAKLWKMVDDPSTNHLIDWSDEGNSFIIHNQ
ADFAQKMLPYYYKHSNLASFVRQLNMYGFHKVLGIDSGGLKSERADQMEF
AHSDFLRGHGHLLDQIKRKISTGKNSGANSGNYSTTFVPNLKSERVTEVL
NEVSIIKDKQDEMDGKLDSMKKENEALWREVVTLRQKHQSQQKIVNKLIQ
FLVSLVQPRVGGGSSTAVKRRFNNLPLALEGEHSSSAKEPKLSENVNGPI
IKDVTHISNADFSCPITSGIIETPYSPMQAVDPTLVSGSIPVSHMVTKEK
NTNSLSSSSILNLNDPLSGINTMMTNSRPILTREISKEDIDLDMNNMQKD
LDNLKDILSGQVTLDTSIISNIFNPEEPLYSFVPFLWWSSKQ back to topmRNA from alignment at LSalAtl2s297:361088..364535+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005535-701382 ID=EMLSAT00000005535-701382|Name=EMLSAT00000005535|organism=Lepeophtheirus salmonis|type=mRNA|length=3448bp|location=Sequence derived from alignment at LSalAtl2s297:361088..364535+ (Lepeophtheirus salmonis)
ATGAAGCTAAAAATACAAGAGGAGAGGAGGGGGAAAAGCATTAAGGTGAA
TGAAAAGAAAGAAAAAGGTTTGAAAAATCAGAAATAAAGCCCTGACCAAT
GAGAAGGGAGACTCTGAAAAGAAGTAGCGAATGAGAAGCAAGGATAGTCG
TTGCCTCATGCGCCTGTAATCACTTACCTTCTGTCTCAATAATTTAAGAC
TTAAGTGGTTTCCAGACTCCAAATTAGTGGTAAGGACCCTCAATTATTAC
TCAATCCAGTCTCTCCTTCTTCATAATATAAATTTATTTGGAAGGAACTA
TTAATTATGGACTTGTCAAGTGCTAAAGTGTCAGATGAAGATCGGGTGAC
TCTCTGTCGAAAGTATTTCATTGCTGGATTTTGTTTCTTACCCTTTGCAT
GGTTTGTGAACGTGCTCTGGTTCTATTCACAAGGATTTACGAGAGAGGAT
TTCCCAGGACGAAAGAGCATACGTAAAATGGTTATTGGATCTGCGATTGG
TGCCTCGCTTTGGACGGCCGCTTTCATATCTTGGATCATAGTTTTTTACA
ATTACCGAGCTTCATGGGGTCCTCTTGGGGATCGAATGTCATTTAACATT
CCAATTGGAATACCTTAAGCATTACGCCTTGACACTTCACATTCTAATCT
TTGTATTGATCATATATGTATAAAGGACTCTGATTTAAAAAAAAATATTA
TTCATTAATAATAATTAATAAATATGACGGCTAAATTAAAAAAATTATCT
AAACTCATATAAATGTATTACTTTTTATCTTTCAGAGATACTTTGTGACA
AGTGACAACAAAGTGAATTATTCTTATATCTACTAGTATGCTTCCAGTGA
TGGAGATCATGCTTCCATCAGTATCTTCAAATGTCCCAGCCTTTTTAGCT
AAACTTTGGAAAATGGTAGATGATCCGTCTACAAATCATCTTATTGATTG
GTCAGACGAAGGAAATTCTTTTATAATTCATAATCAAGCGGATTTTGCAC
AAAAAATGCTTCCCTACTATTATAAACACTCTAATTTAGCCTCTTTTGTG
CGGCAACTAAATATGTATGGTTTCCATAAAGTGCTTGGAATAGACTCAGG
AGGTCTTAAATCTGAAAGAGCAGATCAAATGGAGTTTGCACACTCGGATT
TCCTTCGAGGTCATGGACATTTATTGGATCAAATTAAGCGAAAAATATCG
ACTGGGAAGAATAGTGGGGCTAACTCGGGGAATTACTCCACTACATTTGT
TCCAAATCTCAAGTCTGAAAGAGTAACTGAGGTTTTAAATGAAGTCAGCA
TTATCAAAGATAAGCAAGATGAAATGGATGGAAAGTTGGATTCCATGAAG
AAAGAGAACGAGGCACTCTGGAGGGAAGTTGTGACACTGAGACAAAAACA
TCAATCTCAACAAAAAATTGTGAACAAGTTGATTCAATTTCTAGTGAGCC
TTGTGCAACCTCGAGTGGGTGGAGGATCTTCAACTGCTGTGAAGAGAAGG
TTTAATAATCTTCCACTTGCTTTAGAAGGAGAACATTCTTCTTCAGCGAA
GGAGCCTAAATTATCTGAAAATGTTAATGGGCCCATCATTAAGGATGTTA
CCCATATATCGAATGCAGATTTCTCTTGCCCCATCACATCTGGAATAATT
GAAACTCCATATAGTCCCATGCAAGCTGTGGATCCTACTCTTGTAAGTGG
ATCAATACCGGTCTCGCATATGGTCACAAAAGAGAAAAACACAAATTCAT
TATCATCTTCTTCAATTTTGAACTTAAACGATCCTCTCTCTGGCATCAAC
ACCATGATGACAAACTCTCGGCCTATTTTAACACGAGAAATATCCAAGGA
GGATATTGATCTCGATATGAACAACATGCAAAAAGATCTAGACAATTTAA
AGGATATATTGTCTGGCCAGGTTACCCTGGATACATCCATCATTTCCAAT
ATATTTAACCCCGAAGAACCACTTTACTCCTTTGTACCNTTCCTCTGGTG
GAGCTCCAAGCAGTAACAACTTGAGTTCCACACCTATCATGGATGATCTC
TTACGTGCCATGAATTCGAATGAAAAGTCCTCAGTCGCTCCCTCAAACAA
CAAATTACAGTTAGAGTGTGATCCGCCTGTTGGTTTGGAAGTAAACATGA
ATGACCACCACCACCACCATTCATCTTCATCCAATAACATGAACAGAAAA
AAATCAGTTCTTAAACTGTCTAATAAAATTATTATGGAGCCTGATGATAT
TTCAGAGTTAAATACTCCAGCTATATGCTTAGAAGAGGATCCTCTTTTAA
CTCAGTTGAACGAATAGACTAAAGTGGGACAAGAATTCACACACATATAT
TTATTATATATATATATATATATCTAGTAATATAAGACACCAAGAAATAA
TTAATTATAATTATCATCATAGTACATAAAATGTACTATTGCATCTTAAT
GTTGGTTATGTGTGTATTTTTAAATACTTATTCCTAGTATTAACAACAAA
TTAAAAAATTCTTCATTTAGCGAATGTGTGGTTGTCTAAAGTTCACTTTC
ATGGTACTATACACGTAATTATTTTACATCGCAAATGAATTTGAATATAT
GAATATCTGTAAAATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTCCATACCTCACTAGAATACTACATCGTACCATTTTTGGAATTAACAG
GTGTAGAAAAATATAAACAAAATATATGGGTTACTACAAAATGGATTTGA
CTCAAACAATTTGGTATGTGGTATTATTGATACGTAAGATCTAGTATTTA
ATCTGACTGGGTGAGTTCTGAGGTCTTAAAAATTAAGGTTGAATCGATTT
GAATTTTGATTTGTGATAATTCATATATCGGTAACTAAAGCGATAATTGA
AGACAATTAATAATTAAACCTAATTGAAAAGGTAATTTGAGGCCGTTTCA
TCGCGACAATTTAACGTTGAATGAACCATCAATATATACTGTATAAGTTG
TTACTTCTACATGTTGGAAGAATTTAGAATACGTGTTGTAATAAGGATAT
AAACACCATTAGACGTTTTATAAGTAACTATGTAATTTTTGACAAATGGC
TAAGATTTTTTAACAATGGCACATTATAAAATTTATGTGTCCATAGTTAT
ATTAATAGTAAATTCAAAGAAATAGGTCATTTTAACGTTATCAAAATAAA
GTGATTGTGTCAATGTTGAGTGATTTTAATCAAAATATTGTTATCAAAAA
ATACCTAATATATCCGAACTATAAGGATTAAAAAAAATCATCTTGCATTT
TATAAAATTGAGTCTTAATGTACTCATATGTGACAAATATGGAGCTGCTC
GATTATATGACTTTAAATTATAAAGTGACTCACTTTCCTTGAGAGATGAT
ATCGTATTTAAGGATCTTTAGAGGAAAATAAACTCCTCAATTTATTAA back to top
|
