|
Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 337..358 |
None | No IPR available | PANTHER | PTHR10015:SF11 | HEAT SHOCK TRANSCRIPTION FACTOR (HSF) | coord: 11..208 |
None | No IPR available | SUPERFAMILY | 46785 | "Winged helix" DNA-binding domain | coord: 14..119 |
IPR000232 | Heat shock factor (HSF)-type, DNA-binding | PRINTS | PR00056 | HSFDOMAIN | coord: 57..69 score: 57.36 coord: 19..42 score: 47.98 coord: 70..82 score: 83.52 |
IPR000232 | Heat shock factor (HSF)-type, DNA-binding | SMART | SM00415 | HSF | coord: 15..119 e-value: 5.2E-56 score: 202.1 |
IPR000232 | Heat shock factor (HSF)-type, DNA-binding | PFAM | PF00447 | HSF_DNA-bind | coord: 18..121 e-value: 8.3E-35 score: 118.9 |
IPR000232 | Heat shock factor (HSF)-type, DNA-binding | PROSITE | PS00434 | HSF_DOMAIN | coord: 58..82 |
IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 15..119 e-value: 9.8E-39 score: 131.3 |
IPR027725 | Heat shock transcription factor family | PANTHER | PTHR10015 | HEAT SHOCK TRANSCRIPTION FACTOR | coord: 11..208 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000005535 ID=EMLSAP00000005535|Name=EMLSAP00000005535|organism=Lepeophtheirus salmonis|type=polypeptide|length=392bp MLPVMEIMLPSVSSNVPAFLAKLWKMVDDPSTNHLIDWSDEGNSFIIHNQ ADFAQKMLPYYYKHSNLASFVRQLNMYGFHKVLGIDSGGLKSERADQMEF AHSDFLRGHGHLLDQIKRKISTGKNSGANSGNYSTTFVPNLKSERVTEVL NEVSIIKDKQDEMDGKLDSMKKENEALWREVVTLRQKHQSQQKIVNKLIQ FLVSLVQPRVGGGSSTAVKRRFNNLPLALEGEHSSSAKEPKLSENVNGPI IKDVTHISNADFSCPITSGIIETPYSPMQAVDPTLVSGSIPVSHMVTKEK NTNSLSSSSILNLNDPLSGINTMMTNSRPILTREISKEDIDLDMNNMQKD LDNLKDILSGQVTLDTSIISNIFNPEEPLYSFVPFLWWSSKQ back to top
|