EMLSAT00000005567, EMLSAT00000005567-701414 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005567
Unique NameEMLSAT00000005567-701414
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:1041321..1041996 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005567 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005567EMLSAG00000005567-688333Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024319EMLSAE00000024319-733247Lepeophtheirus salmonisexon
EMLSAE00000024320EMLSAE00000024320-733248Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780302auto780302Lepeophtheirus salmonispolypeptide
EMLSAP00000005567EMLSAP00000005567Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005567

>EMLSAP00000005567 ID=EMLSAP00000005567|Name=EMLSAP00000005567|organism=Lepeophtheirus salmonis|type=polypeptide|length=199bp
MGGHLGKEPLSNLVNLGTYHCAMIGLDSSGKTTVLYRLKFDQYMNTAPTI
GFNCEKVRTGGVNFLVWDVGGQDKLRPLWRSYTRCTDGIIFVIDSCQVDR
LEEAKLELLKICKSNKSVPLLILANKQDLPEACSTSKLESSLGLKDLGVN
TPWHIQSTCAVTGEGLEEGMDKLHRLIAVKRKKNIKVSRKVQRSHSYHH
back to top

mRNA from alignment at LSalAtl2s2:1041321..1041996-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005567-701414 ID=EMLSAT00000005567-701414|Name=EMLSAT00000005567|organism=Lepeophtheirus salmonis|type=mRNA|length=676bp|location=Sequence derived from alignment at LSalAtl2s2:1041321..1041996- (Lepeophtheirus salmonis)
ATGGGTGGACATTTAGGAAAGGAGCCATTGTCCAACTTGGTTAACTTGGG
AACGTATCATTGTGCCATGATTGGCTTAGACTCGAGTGGAAAAACGACAG
TTCTGTACCGCCTCAAGTTTGATCAGTACATGAACACAGCTCCTACCATT
GGATTCAACTGTGAAAAGGTAAGTTTGAAAAATGCTTTGCTTTGGGGTTT
TTAAAGATATGATCCTCACTGATTACCTTATGTTGTTGTTGCAGGTTCGA
ACTGGAGGAGTGAATTTCCTCGTTTGGGACGTTGGCGGTCAGGATAAACT
TCGGCCTCTTTGGCGTAGTTATACCCGTTGTACTGACGGCATCATATTTG
TCATTGATTCCTGCCAAGTGGATCGGCTGGAAGAGGCCAAACTCGAACTC
CTCAAAATATGTAAAAGTAACAAAAGTGTTCCTCTTCTGATTCTTGCGAA
TAAGCAGGATCTCCCTGAAGCCTGCAGCACATCCAAACTCGAATCCTCTC
TTGGTCTAAAAGATTTAGGAGTCAACACACCTTGGCACATACAATCCACT
TGTGCAGTGACAGGGGAAGGTCTCGAGGAAGGAATGGATAAATTGCACCG
GYTGATTGCAGTGAAGCGAAAGAAAAATATCAAAGTATCAAGGAAAGTTC
AGCGTTCGCATAGTTATCATCATTGA
back to top
Add to Basket