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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR006689 | Small GTPase superfamily, ARF/SAR type | PRINTS | PR00328 | SAR1GTPBP | coord: 118..139 score: 53.48 coord: 20..43 score: 43.14 coord: 48..72 score: 32.94 |
IPR006689 | Small GTPase superfamily, ARF/SAR type | PFAM | PF00025 | Arf | coord: 19..175 e-value: 5.1E-60 score: 201.5 |
IPR006687 | Small GTPase superfamily, SAR1-type | SMART | SM00178 | SAR | coord: 10..177 e-value: 6.6E-15 score: 65.5 |
IPR003579 | Small GTPase superfamily, Rab type | SMART | SM00175 | RAB | coord: 19..184 e-value: 0.0065 score: -73.4 |
IPR024156 | Small GTPase superfamily, ARF type | SMART | SM00177 | ARF | coord: 1..181 e-value: 1.4E-55 score: 200.6 |
IPR024156 | Small GTPase superfamily, ARF type | PROSITE | PS51417 | ARF | coord: 12..177 score: 19.198 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 18..176 e-value: 4.0E-53 score: 179.0 |
None | No IPR available | PANTHER | PTHR11711 | ADP RIBOSYLATION FACTOR-RELATED | coord: 10..190 |
None | No IPR available | PANTHER | PTHR11711:SF28 | ADP-RIBOSYLATION FACTOR-LIKE 4, ARL4 | coord: 10..190 |
IPR005225 | Small GTP-binding protein domain | TIGRFAM | TIGR00231 | TIGR00231 | coord: 18..146 e-value: 8.7E-20 score: 68.9 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 18..182 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000005567 ID=EMLSAP00000005567|Name=EMLSAP00000005567|organism=Lepeophtheirus salmonis|type=polypeptide|length=199bp MGGHLGKEPLSNLVNLGTYHCAMIGLDSSGKTTVLYRLKFDQYMNTAPTI GFNCEKVRTGGVNFLVWDVGGQDKLRPLWRSYTRCTDGIIFVIDSCQVDR LEEAKLELLKICKSNKSVPLLILANKQDLPEACSTSKLESSLGLKDLGVN TPWHIQSTCAVTGEGLEEGMDKLHRLIAVKRKKNIKVSRKVQRSHSYHH back to top
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