EMLSAT00000005583, EMLSAT00000005583-701430 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005583
Unique NameEMLSAT00000005583-701430
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:2055036..2056426 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005583 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005583EMLSAG00000005583-688349Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024415EMLSAE00000024415-733343Lepeophtheirus salmonisexon
EMLSAE00000024416EMLSAE00000024416-733344Lepeophtheirus salmonisexon
EMLSAE00000024417EMLSAE00000024417-733345Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780941auto780941Lepeophtheirus salmonispolypeptide
EMLSAP00000005583EMLSAP00000005583Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005583

>EMLSAP00000005583 ID=EMLSAP00000005583|Name=EMLSAP00000005583|organism=Lepeophtheirus salmonis|type=polypeptide|length=346bp
MDASGPKHMNLKLTRAKFESIVGDLIKKTIEPCNKAMKDAEVTKSDIGDV
ILVGGMSRMPKVQETCKEIFGRVPSKAVNPDEAVAMGAAIQGGVLAGDVT
DVLLLDVTPLSLGIETLGGVLTKLIQRNTTIPTKKSQVFSTAADGQTQVE
IKVMQGEREMAIDNKILGQFQLVGIPPAPRGVPQIEVTFDIDANGIVNVH
ARDKGTGKEQQIVIQSSGGLSKDEIENMVRDAEAHADADKVKKERIEAIN
QAEGILHDTEAKMDEYKDQLPSEXXXXXXVKDKLANKDEMDPEDIKKTVS
ELQQSSLKLFEIAYKKMASEREGGSSSSSSSSEGTSSDESKKEDKQ
back to top

mRNA from alignment at LSalAtl2s2:2055036..2056426-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005583-701430 ID=EMLSAT00000005583-701430|Name=EMLSAT00000005583|organism=Lepeophtheirus salmonis|type=mRNA|length=1391bp|location=Sequence derived from alignment at LSalAtl2s2:2055036..2056426- (Lepeophtheirus salmonis)
ATGGATGCTAGCGGCCCTAAGCACATGAATCTCAAGGTAATTAAATAATT
CCCTCTGCTCACTAATGACATGAGGAAAATTTATCGATGAATGTTATTAT
GTATGCAACTAAACTCTAATTTTTTTCTGATCTTATGTTACTTCATTTGT
TTACTATGAGTATTTTTTATATTCCGATTAATTTATATATGATGTTTATC
CTTAGTTGACCAGAGCCAAATTTGAAAGTATTGTGGGTGATTTAATCAAG
AAAACTATTGAACCCTGTAACAAAGCCATGAAGGATGCCGAAGTCACTAA
GTCTGACATCGGAGACGTTATCTTGGTCGGTGGAATGTCTCGTATGCCCA
AGGTTCAAGAAACTTGTAAAGAAATTTTCGGTCGTGTTCCCAGCAAAGCA
GTCAATCCTGATGAAGCTGTAGCTATGGGTGCTGCTATTCAAGGCGGAGT
CCTAGCTGGAGATGTGACTGACGTACTTCTGTTGGACGTTACACCCCTCT
CTTTGGGTATTGAAACTCTTGGTGGGGTTTTGACCAAGTTAATTCAACGT
AATACAACCATTCCTACTAAGAAGAGCCAAGTCTTTTCAACCGCTGCCGA
CGGTCAAACTCAAGTTGAAATCAAGGTAATGCAAGGTGAGCGTGAGATGG
CCATTGACAACAAAATTTTGGGTCAATTCCAACTGGTCGGTATCCCTCCT
GCACCTAGAGGAGTACCTCAAATTGAAGTTACTTTCGATATTGATGCCAA
TGGCATTGTAAATGTACATGCTCGCGATAAGGGTACTGGAAAGGAACAAC
AAATTGTTATCCAGTCCAGTGGTGGTCTTTCCAAAGACGAAATTGAGAAC
ATGGTTAGAGATGCTGAAGCACATGCTGATGCAGACAAAGTCAAAAAAGA
AAGAATTGAAGCTATCAACCAAGCCGAAGGTATCCTTCATGACACAGAAG
CTAAGATGGATGAATACAAGGATCAATTGCCAAGTGAGGNNNNNNNNNNN
NNNNNNGTTAAAGATAAATTAGCCAACAAGGATGAAATGGATCCTGAAGA
TATCAAGAAAACAGTCTCAGAACTCCAACAATCTTCACTCAAGTTATTCG
AAATAGCTTACAAGAAGGTAATACTAAATTTTCATATCAAATTTTTAGAA
TTACCAAATATTCTGATGAACGATAGTTATCAATGAAATTCCTCTTGATT
TTTAACTCTAAACACTCTAATTTTTTTCTGACCTAGTCTCTTGTCCTTTA
ATTCTTACGTTATTTGTTCATGGACTTATTATTTATATTTCTTTGCAGAT
GGCGAGTGAAAGAGAAGGTGGATCATCATCATCATCAAGCAGTAGTGAAG
GAACATCTAGTGATGAATCTAAGAAAGAAGACAAACAGTAA
back to top
Add to Basket