EMLSAT00000005584, EMLSAT00000005584-701431 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005584
Unique NameEMLSAT00000005584-701431
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:2056449..2059024 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005584 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005584EMLSAG00000005584-688350Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024418EMLSAE00000024418-733346Lepeophtheirus salmonisexon
EMLSAE00000024419EMLSAE00000024419-733347Lepeophtheirus salmonisexon
EMLSAE00000024420EMLSAE00000024420-733348Lepeophtheirus salmonisexon
EMLSAE00000024421EMLSAE00000024421-733349Lepeophtheirus salmonisexon
EMLSAE00000024422EMLSAE00000024422-733350Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780942auto780942Lepeophtheirus salmonispolypeptide
EMLSAP00000005584EMLSAP00000005584Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005584

>EMLSAP00000005584 ID=EMLSAP00000005584|Name=EMLSAP00000005584|organism=Lepeophtheirus salmonis|type=polypeptide|length=328bp
MLSATKFASRIIKETPWTTSFQGSLLQSAQQSSFLASKYQISENNKRWKS
TGVSGAVVGIDLGTTNSCVAVMEGKQAKVIENSEGARTTPSIVAFTSDGE
RLAGMPAKRQSVTNSENTFYATKRLIGRRFEDEEVKKDMNMVSYKIVKSS
NGDAWVKSTDGKVYSPSQIGAFVLTKMKETAEGYLGTSVKNAVVTVPAYF
NDSQRQATKDAGQISGLNVLRVINEPTAAALAYGMDKSDDKVIAVYDLGG
GTFDISVLEIQKGVFEVKSTNGNTFLGGEDFDNALLIHLVAEFKRDQGID
LAKDSMALQRVREAAEKAKSGAFFFNAN
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mRNA from alignment at LSalAtl2s2:2056449..2059024-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005584-701431 ID=EMLSAT00000005584-701431|Name=EMLSAT00000005584|organism=Lepeophtheirus salmonis|type=mRNA|length=2576bp|location=Sequence derived from alignment at LSalAtl2s2:2056449..2059024- (Lepeophtheirus salmonis)
ATGCTCTCTGCTACCAAATTTGCCTCACGAATCATAAAGGAAACTCCTTG
GACGACCTCATTCCAAGGAAGTCTTCTCCAAAGTGCTCAGCAGGTAAGAA
CCTCTTAATCCTCTCCTTCTTCCCCATTGTATTCAGATTATTCATGGATT
CATTTCTCTCTATTAGTCCTCCTTCCTTGCATCCAAGTACCAGATATCCG
AGAATAACAAGAGATGGAAGTCTACGGGAGTGTCTGGYGCCGTTGTGGGC
ATCGACTTGGGMACGACCAACTCCTGTGTAGCTGTTATGGAGGGCAAACA
GGCTAAAGTGATTGAGAATTCCGAAGGCGCACGGACGACTCCTTCCATCG
TTGCTTTTACTTCAGGTAGATAATTAATTCATTTGATCCTTGAGAATCCC
GTCTGAGACGGGAATGATCCAGAGAAATGAGAGCACGTGATGTCGAATAT
ATTTTTCGTCACCTGACATTGTATGGAGACCTTTTTTTGTCTGATGCTCC
ATTTCTGTTACATCTATTAAAAGGATGTCTTTTGCCCGAGTCATATACAT
TCTAATTAATGAGTATCTTTTATTATTATTAAATAGATGGCGAAAGACTT
GCAGGAATGCCGGCTAAGCGGCAATCCGTCACAAACTCTGAAAACACGTT
TTACGCCACAAAACGTCTGATTGGTAGACGCTTTGAAGATGAAGAAGTGA
AGAAAGATATGTAAGTGAGCATAGGGAATATAGCCCTTCCCTACTTAAAA
GTGTACATGTAACTGATAACTTATTTCCTCGAAATTGAGAGGATTGTTTA
TNGCTGTTGTACTGTTTATATTAGAGAAATTAAATTTTCCGTACATCCGT
CAATTGGGTTGATGCTTATAACAATTCTTTACTTGTTATTGAACATTTCA
CTGATTTTATAATTGCAGTAGACTCTATTTTGGGGCTCGAAGTTGATCTT
TTTACTACATTAAAATTAATCCATTAAATCTAGATAAAACAACCATCAAA
TGGTTTTTTTTAAGACTAAAATCTGCATTAAACAACATTTATTGCAAATG
ATTAACACTCATTGGAATTAAATCTAAATAATAAGTCCTATAAAAGGAAG
GATTTATACCATTTTTAGTTACGAATTTGGATCGATTAAGGATTAGAAAA
TAGGATCATCAGTGAAAAATATTCACCTTAATGNNNTAATTGCTATCTAT
TAAATAGAAAGAAACTTGAAAAACGATATAATAAATATTTTTAATGGATA
TTAGTGTCTGACTTATAATATAACGGAATATTTCAGGAATATATTTGTGA
TTGATAATTTAAGTCTTTCTATTTGTTGGTCCAATTTTGACGTCAAATAG
TTAAGKTTTTTCCTCAATATTAATGGGAAGAATGTTTTCATGGATTCATA
ACTTGGCTGTTCATGCCTCCAAAATGACCAACATCAACAGTGCTAACGCA
CGTGAACCCGCTTTAAATCTTTTTCGTTTTTGTTACAACTTTGATTTTTT
TAGGTATTTATTTTTAATAGGATGATAGTAAACGTATGAATTCTACTTAG
GGGGAGGGGGTAAGAAAAATAAAGGAAATGATTCATTTACGAATTTTTTT
CGTCTCCTTTTCATTCAGTTACCTGTACACTAATACATCCTATTTCAAAG
ACATGGCCTGGCTTTTAATGTTAGACTGTGTAACAATCATAGGTAGATTA
TTACAGAATTTTAAGTAATATTTTTTGAGTTTTTTTCAATTACACACATT
TGTCACAGCTCATTATTATTAAATTCTATATTTCATTAGGAATATGGTTT
CTTATAAAATAGTCAAGTCCAGTAATGGAGATGCATGGGTCAAGTCAACA
GATGGAAAGGTCTATAGTCCTAGTCAGATAGGTGCATTCGTTCTTACTAA
AATGAAAGAAACAGCTGAGGGATATTTAGGAACTTCGGTCAAAAATGCTG
TTGTCACAGTTCCTGCTTATTTTAACGATTCTCAACGACAGGCTACAAAA
GATGCAGGTCAAATATCTGGATTAAATGTTTTGCGTGTTATTAATGAACC
CACAGCTGCTGCTCTGGCTTATGGAATGGACAAGTCTGATGATAAAGTGT
AAGAATTACTTCTAATTTTATATTTTTCGCTACATGTCAATTCCAGAATC
TTGTCTTGATCTTGATTATGGGCCGAAGTGGCGATAAAATAAATCGTTTG
GCTGATTTTTAACTCCCTGAAACATTATGTTTGAGGGATTTCAAATACTC
GATACAATAATCAATTCATTTAATCTCAAATATGTGTACTAATTATATAT
CCTTCTATATTTAGCATTGCAGTATACGATCTCGGTGGTGGAACTTTTGA
TATTTCTGTTTTAGAAATACAAAAAGGAGTCTTTGAGGTGAAGTCCACAA
ATGGCAATACTTTTTTGGGTGGTGAGGATTTTGATAATGCTCTACTCATC
CATCTTGTCGCTGAATTTAAACGGGACCAAGGTATTGATTTGGCTAAGGA
CTCCATGGCTCTTCAAAGAGTTCGTGAAGCTGCGGAAAAAGCTAAAAGTG
GAGCTTTCTTCTTCAATGCAAACTGA
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