EMLSAT00000005593, EMLSAT00000005593-701440 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005593
Unique NameEMLSAT00000005593-701440
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:264771..266435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005593 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005593EMLSAG00000005593-688359Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024467EMLSAE00000024467-733395Lepeophtheirus salmonisexon
EMLSAE00000024468EMLSAE00000024468-733396Lepeophtheirus salmonisexon
EMLSAE00000024469EMLSAE00000024469-733397Lepeophtheirus salmonisexon
EMLSAE00000024470EMLSAE00000024470-733398Lepeophtheirus salmonisexon
EMLSAE00000024471EMLSAE00000024471-733399Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775541auto775541Lepeophtheirus salmonispolypeptide
EMLSAP00000005593EMLSAP00000005593Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005593

>EMLSAP00000005593 ID=EMLSAP00000005593|Name=EMLSAP00000005593|organism=Lepeophtheirus salmonis|type=polypeptide|length=438bp
MSSREKELRNVFKERVGEEPIGMVEVPGRVNIIGEHIDYSGYAVLPMAIE
QTAVILFSPSXQPLLTLRNTNSAKYEDFSLDLSTSWTIDKGRHPYWYKYF
LCGLKGIIDEFPKVSSKGFNVLYDGQIPPSAGLSSSSALVVAAALCALRV
NEMQLESSKLANVCAKAERYIGTEGGGMDQAIEILAEKGKAKLIKFNPLQ
TFNVILPGGANFVIINSLAESNKAAGTDFNSRVLECKLACKLLAVALDIS
PISDIHTLGHLQKLSSLSXRRNGRMCHESEDYEKEDLLLNDNTRDLLKDW
SFSNRFALQKRAKHVFSEARRVYEFKNVAESQDQDNLNRMGLLMLQSHES
CRELYECSHPDLDRLVKLSTDQGAYGARLTGAGWGGCILALFPREKISNF
KNIVIESYYKKYKGLHVDNYDYYLFDTQPGGGAYSTLF
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mRNA from alignment at LSalAtl2s2:264771..266435+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005593-701440 ID=EMLSAT00000005593-701440|Name=EMLSAT00000005593|organism=Lepeophtheirus salmonis|type=mRNA|length=1665bp|location=Sequence derived from alignment at LSalAtl2s2:264771..266435+ (Lepeophtheirus salmonis)
CTCAATACAAACCAAGGTATCCCACCAAAAATAACACATCCATTGAATGA TTGACGTTAGAGTTTGAACATCAACTTGAGAGCTGTATACAATTAACTTA CAAGCTGTATTACTACATGTGTCGATGTAGTTATAATTTATAAGCATCAA TTTCTATTCAGTATTCCTGATTCTTTGTAATTATGTCATCAAGAGAGAAA GAACTTAGAAATGTATTTAAGGAAAGGGTGGGTGAAGAGCCCATTGGAAT GGTTGAAGTTCCAGGAAGAGTTAATATTATAGGAGAACATATTGACTACT CAGGCTACGCAGTTCTTCCTATGGCCATAGAGCAAACTGCAGTAATTCTC TTTAGYCCCTCCYCCCAGCCTCTTCTCACACTAAGTATTAACTACATCAA ATATTATTTTAATTGTTCTGATTGTATTTTTTTAGGAAACACAAATAGTG CAAAGTATGAGGACTTTAGCCTGGACTTGTCCACGTCATGGACCATTGAT AAAGGACGTCATCCTTATTGGTATAAATATTTTCTCTGTGGTTTAAAGGG AATCATCGATGAATTCCCAAAGGTTTCAAGTAAAGGGTTTAATGTACTAT ATGATGGTCAAATACCTCCTTCCGCGGGTCTCTCAAGCTCAAGCGCCCTG GTTGTTGCAGCTGCACTATGTAATTCATTTTAGCAATATGTATGCATTTG ATATATTTTAAAATACACAGGCGCGTTAAGGGTTAACGAAATGCAATTAG AGTCCTCCAAACTAGCAAATGTATGTGCTAAAGCGGAAAGATATATTGGA ACTGAAGGTGGAGGAATGGATCAAGCTATTGAAATTCTTGCAGAAAAAGG AAAAGCAAAACTGATTAAATTCAACCCTCTTCAAACCTTTAATGTTATAT TACCTGGAGGAGCTAATTTTGTGATAATCAATAGGTACATTTTTCTACAT ATTTCTTTGATTTTCATTTCAAGTGATCCTTTTTTAAGCTTAGCAGAATC TAATAAAGCCGCTGGAACAGATTTTAATTCTCGTGTTCTAGAATGCAAAC TTGCTTGTAAGCTCTTGGCTGTAGCTCTTGATATATCTCCTATATCGGAT ATACATACCTTAGGACATCTTCAAAAACTATCTTCACTGTCTNCTCGAAG AAATGGAAGAATGTGTCATGAAGTATTTAAAGAGCGAAGACTATGAGAAG GAAGATTTATTACTTAATGATAATACCAGGGATTTGTTGAAAGATTGGAG CTTCTCAAATCGTTTTGCACTACAAAAAAGGGCCAAACATGTCTTTTCAG AAGCTAGAAGGGTCTATGAATTCAAAAATGTTGCAGAATCCCAGGATCAG GATAATTTAAATAGAATGGGTCTTTTAATGCTTCAATCCCATGAGAGCTG TAGGGAATTATATGAATGTTCACATCCTGACTTGGATCGTTTGGTTAAAT TATCTACTGATCAGGGTGCATATGGAGCGCGACTTACAGGTGCCGGATGG GGAGGATGCATTTTAGCCCTGTTTCCAAGAGAAAAAATATCCAACTTCAA GAATATTGTGATAGAATCATATTATAAGAAATACAAAGGACTTCATGTTG ATAATTATGATTACTATTTATTTGATACCCAACCTGGTGGAGGTGCTTAT TCTACTCTCTTTTAA
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