EMLSAT00000005609, EMLSAT00000005609-701456 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005609
Unique NameEMLSAT00000005609-701456
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:878105..880410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005609 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005609EMLSAG00000005609-688375Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024562EMLSAE00000024562-733490Lepeophtheirus salmonisexon
EMLSAE00000024563EMLSAE00000024563-733491Lepeophtheirus salmonisexon
EMLSAE00000024564EMLSAE00000024564-733492Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779977auto779977Lepeophtheirus salmonispolypeptide
EMLSAP00000005609EMLSAP00000005609Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005609

>EMLSAP00000005609 ID=EMLSAP00000005609|Name=EMLSAP00000005609|organism=Lepeophtheirus salmonis|type=polypeptide|length=430bp
MSTTTTTTTTSSTSTTHDASSSSSSSSESSSSDKASSLFQHHHHGGTPNV
SLTIRMVMNGKEVGSIIGKGGEIINSIREASGAKIHISDGSVPERIVTIT
GTTEAIYKSFKLICKKFEEDRDPKPPITLRLIVPASQCGSLIGKGGSKIK
EMREISGASIQVASEMLPNSTERAVTVSGTKEAITQCILHVCCVMLETPP
KGSTIPYHPKTANARNSTPMRDAAQSHPLASLLTPSLMAIASLLRHKAPV
DDNNRNTTSFEMSIPNDSIGXIIGKGGSKIAEIRHLSNAMIRISKSSESD
SEKERLITITGSPEAVSLAKSLINMALDLHKNDQGAALNLGLLLSKPETL
TALTSLASLTSIGGSLLGNLVSNGSPNNGGGNMLVGQVTGAHRSRNSASG
GSTSSSSGSRSSRNEDDRGRESKRSKFAPY
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mRNA from alignment at LSalAtl2s2:878105..880410+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005609-701456 ID=EMLSAT00000005609-701456|Name=EMLSAT00000005609|organism=Lepeophtheirus salmonis|type=mRNA|length=2306bp|location=Sequence derived from alignment at LSalAtl2s2:878105..880410+ (Lepeophtheirus salmonis)
GCTGAGTGTGTGAGAGAGAGAGAGAAGAAGTGAGAGTGGAGAAGCGAGAA
AGGGAGAAGAAGTGAGAACTCGCAGTTGTATCTCTGCTTGCTTCACGTTT
TGACAGATTCCCTTTAAACTTCTTTGGTCTAGGTTCTCTGATATAGAGTA
TGTCGAGAGGTGCTCAAGTTATTTGAATACAGTACCCACCCATTCCGTTT
GAAGGCAAGCATATTCTGCTTGAGAGTCCAAATTTTGGCCGTCATCGTCG
TCGTTGTGACCCTGGTGAGTATTGAGGCTAGTTACTTGTATTTAGAAAGA
CAGGGAATATGAAAAGTGACATAGCGAGGAAGTGAGTGATTGGGGGGAGG
GGTAAAGGGAGTYGTGGAGAGTGATCCTCTGCCTTCCTTCCNRCCCCCCC
CCCCCTTCGCCTCCTCTCGAGTCCTGTCATGTCCTCTTGGTGGGAGTAGA
GTAGGCCCCCTTTCTCCCTCCCGCCCCCCCCCTTTGCTTGATTACATTTT
TGGCGCATTTTTTAGTGTGTGACGAGTAAAGAGATCGAATTGATCCGACT
TGCTTGATGATTGATGATGATGCCAAGTTCAAGTAAAGCTCCTTTAACAG
CTCTTGCTCCTCCATTTCCAGACTCACATTTCCTCCTCTCTCTAAATCCT
CCTTACTACCCATGTCCACCACCACCACCACCACCACCACATCATCCACA
TCCACCACTCATGACGCTTCATCCTCCTCGTCATCCTCATCGGAATCATC
CTCGTCCGACAAAGCTTCGTCCCTCTTCCAGCATCACCACCATGGAGGCA
CTCCAAACGTCTCTCTCACCATCCGCATGGTCATGAATGGAAAAGAAGTG
GGCTCCATCATTGGAAAAGGAGGAGAAATTATCAATTCTATTCGTGAAGC
ATCCGGTGCAAAGATTCACATCTCAGATGGATCCGTGCCTGAACGGATTG
TTACCATCACTGGTACCACAGAGGCCATCTACAAGTCTTTCAAACTCATT
TGTAAAAAGTTTGAAGAGGATCGAGATCCCAAGCCTCCCATCACACTACG
ACTCATTGTACCCGCTTCACAGTGTGGCTCTCTTATTGGAAAAGGCGGAT
CCAAGATTAAGGAAATGCGGGAAATAAGTGGAGCCTCCATTCAAGTGGCC
TCAGAAATGCTCCCTAACTCGACGGAAAGGGCTGTTACAGTCTCAGGCAC
GAAGGAAGCCATCACGCAATGCATTCTTCATGTCTGTTGTGTTATGTTAG
AAACTCCTCCGAAAGGCTCTACTATTCCCTACCATCCTAAAACCGCAAAC
GCAAGAAACTCAACGCCCATGCGAGACGCAGCGCAAAGCCATCCCCTAGC
ATCACTTCTCACTCCTTCTCTCATGGCGATCGCCTCTCTACTAAGGCACA
AAGCTCCTGTAGATGACAATAATAGAAATACTACATCCTTCGAAATGTCG
ATTCCTAATGATTCCATCGGCTGMATCATCGGAAAAGGAGGCTCTAAAAT
AGCAGAAATTCGACACTTGTCTAACGCCATGATTCGGATTTCTAAAAGTA
GTGAGTCCGATTCTGAGAAGGAGCGCCTTATTACAATTACTGGCAGTCCA
GAAGCAGTCTCCTTAGCAAAATCTCTCATCAATATGGCTCTCGATCTTCA
CAAAAATGATCAGGGTGCCGCACTCAATTTGGGTTTACTACTCTCTAAAC
CCGAAACGCTAACAGCTCTTACAAGCTTGGCGTCTCTCACATCTATTGGA
GGAAGTCTACTTGGTAATCTCGTATCCAATGGAAGTCCAAATAATGGTGG
CGGGAATATGTTGGTGGGACAAGTTACGGGTGCGCATCGATCAAGAAATA
GTGCAAGTGGAGGAAGTACTTCATCAAGCTCTGGATCTCGCAGCAGCAGG
AACGAAGATGATCGTGGAAGGGAGTCAAAACGGTCTAAATTTGCTCCCTA
TTAAAGTATATAATACAATAGAGAATAACTCAACAACAGTTAAAAAATAA
ATAAGAAATATTATTAAAATATATAGTTAGATTTATGAAGTCAAATACGT
GTGTATGTATGTAGTTTGGACATACATATAAGTATTTTTTTTTCTTTCTT
TTTTCCCCTCCTTCCTTCCTTCCTTCCTTATAAAAAGTAATAAGTAACTA
AGCAAGTGGCAGCATGTACAAAGAAAAAAAGAGAAATTTTTCGTTTTTAT
CCTTCTTTAAAATCAAATTTGTTGTTTTCAGTTAAATAAATTGTTTAAAT
AAATTTTATTATTATTTAGTCAAGAAATTTATGTTGAAATTATCATTATT
ATCTAA
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