EMLSAT00000005636, EMLSAT00000005636-701483 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005636
Unique NameEMLSAT00000005636-701483
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3031supercontigLSalAtl2s3031:10533..12187 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005636 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005636EMLSAG00000005636-688402Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024659EMLSAE00000024659-733587Lepeophtheirus salmonisexon
EMLSAE00000024660EMLSAE00000024660-733588Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768924auto768924Lepeophtheirus salmonispolypeptide
EMLSAP00000005636EMLSAP00000005636Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005636

>EMLSAP00000005636 ID=EMLSAP00000005636|Name=EMLSAP00000005636|organism=Lepeophtheirus salmonis|type=polypeptide|length=469bp
MLLAFGADITARTKGGTSALSMIVRKTPNVLPKFEDMLDHAITLAEHDIN
DVDCELKLDFRVLIPNRTRGESNMFINFIETGHNHLLKHPLCESFLHLKW
LKVRKFFLVSLIFHLLFTILHTTFVLQVYYSGQCIVRDNCKYGNETDFQK
IERTPYWESVNGDCFDPFEEQCKIXSLTLFVWISLLFSTSILMGKECFQL
AHSQKMYFYNWENWVQLGIILDVILISFHKDPFDSLEHYIPLIGIWQHHA
AAIGVFLVWGELMLMIGRLPTFGIYVQMFTTVAKNFAKFLAAYFCLLVAF
ALSFCVLFPNYQSFNVKGRGILSAVIKTLVMMAGEIEYENFIYENGQNLY
VFTGHLMVLIFVLLVSIILMNLLVGLAVSDIQGLQKSAGLDRLVRQTELI
SHIESMLFSRLLHCLPIRFLGVLHQKALVVPHGYSYIYNIRPNDXXEDXL
XKDIXXAIHWLVSTRLVRF
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mRNA from alignment at LSalAtl2s3031:10533..12187+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005636-701483 ID=EMLSAT00000005636-701483|Name=EMLSAT00000005636|organism=Lepeophtheirus salmonis|type=mRNA|length=1655bp|location=Sequence derived from alignment at LSalAtl2s3031:10533..12187+ (Lepeophtheirus salmonis)
GTTTTATATAAAAGATTTATTATTTAATGAGTTATACACTACATAAAATC GTTAGTGTATCATGCTTTTGAAAAATCATAGTTGCTAAATTGTATGTTAA TTATGTTTATTTTGTTCTTAGGTTTGGATACGCTCCTCTTCATATTGCTG CGCTAAATGAATATTCCTACTGTGCAAATATGCTCCTTGCTTTCGGAGCA GACATTACTGCTCGTACCAAAGGAGGTACATCCGCTCTATCCATGATCGT ACGCAAAACACCGAATGTTCTCCCGAAATTCGAGGACATGCTGGATCACG CCATTACTCTCGCTGAGCATGACATAAATGACGTTGACTGCGAACTTAAA CTGGACTTTAGAGTTCTTATACCAAATCGTACCCGAGGAGAATCAAACAT GTTCATCAACTTCATCGAAACAGGACATAATCATCTTCTCAAACATCCCC TCTGTGAGAGTTTCCTCCATTTGAAATGGCTCAAAGTTCGAAAATTCTTC TTAGTGTCTCTCATCTTTCATTTACTATTTACCATACTGCACACCACTTT TGTACTCCAAGTATACTACTCTGGACAGTGCATCGTCAGAGATAACTGCA AATACGGCAACGAAACGGATTTTCAAAAAATAGAAAGAACTCCATACTGG GAGTCCGTCAATGGGGATTGCTTTGATCCCTTCGAGGAGCAGTGCAAAAT TKCCAGCCTCACTCTCTTTGTATGGATTTCCCTTCTCTTCTCAACGTCAA TCCTTATGGGTAAAGAGTGCTTTCAGCTGGCTCACTCCCAGAAGATGTAT TTTTATAATTGGGAGAATTGGGTTCAATTAGGCATTATTTTAGATGTCAT TCTTATAAGCTTCCATAAGGATCCCTTTGACAGTTTGGAACACTACATTC CTTTGATTGGTATATGGCAACATCACGCGGCGGCAATTGGTGTATTTTTA GTTTGGGGAGAACTAATGCTAATGATTGGGAGGCTCCCCACTTTTGGTAT ATACGTTCAGATGTTTACAACTGTGGCAAAGAATTTTGCCAAATTTCTGG CTGCTTACTTTTGTCTCTTAGTGGCATTTGCTCTCAGTTTCTGTGTTCTT TTTCCAAATTATCAAAGCTTTAATGTAAAAGGCAGAGGGATCTTATCCGC TGTTATCAAGACACTGGTTATGATGGCTGGYGAAATTGAATATGAAAACT TCATTTACGAAAATGGACAAAACCTATACGTTTTCACTGGCCATCTTATG GTACTAATATTTGTACTACTAGTCAGCATCATTCTGATGAATCTCCTTGT TGGTTTAGCCGTGAGTGATATTCAGGTAACTAGTAAATCCCTCCTATTTA TTCCAAAAATATCAAGCACATTATACATATTTTTATCCTAGGGACTGCAA AAATCTGCCGGACTTGATCGTTTAGTCCGTCAAACTGAGCTTATTTCACA TATAGAGAGTATGTTGTTCTCACGCCTACTTCACTGTTTACCAATTCGAT TCCTTGGAGTACTACACCAAAAAGCATTAGTTGTTCCGCATGGATATAGC TACATTTATAATATACGTCCAAACGATCRCSGAGAGGACAGKCTGCKAAA GGACATTKCGYAAGCCATACATTGGCTCGTCTCCACAAGGTTAGTAAGGT TTTAA
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