EMLSAT00000005645, EMLSAT00000005645-701492 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005645
Unique NameEMLSAT00000005645-701492
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s303supercontigLSalAtl2s303:379413..381804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005645 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005645EMLSAG00000005645-688411Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024697EMLSAE00000024697-733625Lepeophtheirus salmonisexon
EMLSAE00000024698EMLSAE00000024698-733626Lepeophtheirus salmonisexon
EMLSAE00000024699EMLSAE00000024699-733627Lepeophtheirus salmonisexon
EMLSAE00000024700EMLSAE00000024700-733628Lepeophtheirus salmonisexon
EMLSAE00000024701EMLSAE00000024701-733629Lepeophtheirus salmonisexon
EMLSAE00000024702EMLSAE00000024702-733630Lepeophtheirus salmonisexon
EMLSAE00000024703EMLSAE00000024703-733631Lepeophtheirus salmonisexon
EMLSAE00000024704EMLSAE00000024704-733632Lepeophtheirus salmonisexon
EMLSAE00000024705EMLSAE00000024705-733633Lepeophtheirus salmonisexon
EMLSAE00000024706EMLSAE00000024706-733634Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777060auto777060Lepeophtheirus salmonispolypeptide
EMLSAP00000005645EMLSAP00000005645Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005645

>EMLSAP00000005645 ID=EMLSAP00000005645|Name=EMLSAP00000005645|organism=Lepeophtheirus salmonis|type=polypeptide|length=437bp
MARLYRKNFIDYVVSLDAHHFFTNHVLCGWDGEIKNNSDSTLRKEKIASL
LKESFENKMSHSHRLYKHLDKNLLAKRIVIHIIIISILLSAGALTYFAID
IIEDKLSFGSSLRQILLNFGISVALYVLPLSFMYLTKLEQYELPRTAMYV
SLIRSVILEKIFLITIFVKSVEKAMNEESCWESFVGKAIYQLAVAYVLIL
LLGTFVMELLHRILNSIFNKIPPPDFDTSRNSTHLIYSQSIALIGYYFVP
GISLFMIFSSMLTFYVKLLSLRFNCSKSKTPWRAARSQTVFMVYAFFSTL
ISPSIGCGPFKEYKYSYTIMGEDSFFRDSFIFKPAFIIGLIVILLVSIYY
TQSLNRTYVIETKKLKENINRQKVERRILKNLLASLIFRGFHNVLCEHRK
LCLLLRFDFEFMEIKFLYGWSKSFGILLRSNHGDLKD
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mRNA from alignment at LSalAtl2s303:379413..381804-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005645-701492 ID=EMLSAT00000005645-701492|Name=EMLSAT00000005645|organism=Lepeophtheirus salmonis|type=mRNA|length=2392bp|location=Sequence derived from alignment at LSalAtl2s303:379413..381804- (Lepeophtheirus salmonis)
ATGGCAAGACTCTATAGGTATTTAATTACTTGAATTATTAGTACATTTAA
TTCTAATGTTTAATTGATCTTACAGAAAGAATTTTATCGACTATGTTGTG
TCTCTTGATGCTCACCATTTTTTTACAAATCATGTTTTATGTGGATGGGA
TGGAGAAATTAAGAATAATTCTGACTCTACTCTCCGTAAAGAAAAGATTG
CGTCTCTATTAAAAGTATTATACTTTTTTATAAGTAAGTTTGGCAATGTT
TTCCAATAATTATTTGTATATCTCAGGAGTCCTTTGAGAATAAAATGTCT
CATAGTCATAGATTATACAAGCATTTGGATAAAAACCTACTAGCAAAAAG
AATTGTCATCCATATAATTATTATATCGATACTCCTCTCCGCAGGAGCTT
TGACATACTTCGCTATTGATATAATCGAGGACAAACTGGTATAATTGCTT
AAGTTTAGCATTCTTATTTTATTTTTTTTAATCACAAAAATCATTTGATC
TTGGAAAAGTCTTTTGGTAGTAGTCTCAGGCAAATTCTACTCAACTTTGG
TATCAGTGTTGCACTCTACGTTCTACCCTTAAGTTTTATGTATTTAACCA
AATTAGAACAGTATGAACTGCCAAGGACAGCCATGTATGTGAGTTTGATT
CGTAGTGTTATTTTGGAGAAAATATTTCTCATCACCATTTTCGTGAAAAG
TGTGGAAAAAGCGATGAATGAAGAGTCTTGTTGGGAGAGCTTTGTTGGAA
AAGCGATTTATCAGTTAGCAGTTGCGTATGTTCTTATACTTCTTTTGGGA
ACATTTGTAATGGAGTTACTACATCGTATCTTAAATTCAATGTAAGTTCA
AGGGTCTTATAAATTATCATGTCTTAAGAATGAAACAATATGTTTTCAGC
TTCAACAAAATACCTCCTCCTGACTTTGATACCTCTCGTAACTCTACCCA
TTTGATATATTCACAGTCCATCGCTCTAATCGGATATTACTTTGTACCTG
GCATTTCATTATTCATGATCTTCTCATCAATGCTTACATTCTACGTTAAA
TTAGTAAGTACTCATCTTTGTGTGATAATTTAACTTATTTTGATAGACTC
GACTATAGTTGAGTCTAAGGTTTAATTGTAGTAAATCCAAAACTCCATGG
AGAGCAGCAAGGAGTCAAACAGTTTTTATGGTTTATGCTTTCTTTTCCAC
ACTGATTTCGGTCATTGGTTACATCTTTGTCGTCATCAGGCAATTATAAC
ATTTATTTAATATACATTAACTATATCATAAATGGTTTGTTTTTTAGGCT
TCAGCCCTCCATAGGCTGTGGACCTTTTAAGGAATACAAATATTCATATA
CAATCATGGGTGAAGACAGCTTCTTTAGAGATTCGTTTATTTTTAAGCCA
GCATTTATTATTGGATTAATTGTCATACTTTTGTAAGTTGTCGCATTTTC
CTTTCGAATTTATTATTATAATTAAAATATTTTATTTTTTGCCCTAGGGT
GAGTATATATTATACTCAATCCTTGAATAGGACATATGTCATAGAAACAA
AGAAATTAAAAGAAAATATCAATCGTCAAAAAGTAGAACGAAGAATTTTG
AAAAATCTTTTAGCTTCTTTGTGATGTTTACTTTGAACTTAAGGATGGTT
ACGTTATATTAAATTATTTCAAGGAAATAAAACACTCGGATTTTATGAGA
AAATATCAATTTTTAGCTATTATATTCCAGTTATTTACGTATTTTGTATC
TTCATTGAATTTTCAAGAACTTTCAATTAATTATGAATTATATGTATAGC
AAATAGTTTTTATTAAATAGATTTAGACAAAAAATACTAAAGTATACTTT
TTTCGGGATATGTAAGGAAATAGACTGAATATGAAAATTTGAGCAAAGAA
TGAAGGACTAGACGTGTCAGTTGACATAATAAATGTAATTTATAATATAT
TTATTATATCAGAATCTTCAGAGGGTAAGCTAATAAACCTTTGACAGGCT
TTAAAATCAGGATGTGCCGATGATTTAAGAAATTCCAAAACTAGAGTTTC
TACAGTAGTCAAATGAACATTTGGGAATGATTCCAGTCTTTTAAAAGCCA
ATTTCCTTTCTACTAGCGACCTTGAGCTCACACAATCTACAGGAATGAAA
ACTTCTTTTTGCATTTCGACTAGATCAAATACAGTGTGAAGTATACAGGC
GTGAGCCTCAATCCCACATAGAATCAATGATTCTTTTTTCTCGACAGATT
TCACAATGTCTTGTGTGAGCATAGAAAATTGTGTCTTCTCTTGAGGTTTG
ATTTCGAATTTATGGAGATCAAGTTCCTCTACGGTTGGTCCAAGTCCTTT
GGGATACTGCTCCGTAGCAACCATGGGGATCTTAAGGATTGA
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