EMLSAT00000005708, EMLSAT00000005708-701555 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005708
Unique NameEMLSAT00000005708-701555
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s309supercontigLSalAtl2s309:46456..47355 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005708 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005708EMLSAG00000005708-688474Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024961EMLSAE00000024961-733889Lepeophtheirus salmonisexon
EMLSAE00000024962EMLSAE00000024962-733890Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770549auto770549Lepeophtheirus salmonispolypeptide
EMLSAP00000005708EMLSAP00000005708Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005708

>EMLSAP00000005708 ID=EMLSAP00000005708|Name=EMLSAP00000005708|organism=Lepeophtheirus salmonis|type=polypeptide|length=277bp
MVVEWYNSMWEHRDKRXDGWFLLGSIWPTLIMSXAYVFMVKIFGPAYMSR
KKPVDFKNFMMAYNIVQVASCGWMLRQFWIGGWGTYYNYFCQKVDLDDRP
GSRAMIMATSMYWFYMSKLLDFVDTFLFVARKKNSQITTLHVFHHAIMPL
YTWMMVXWIPGGQETFGGLLNTFIHVLMYSYYFLSALGDWIQPYLWWKRY
LTQAQMVQFILIFIKCTIIVSGXASCGFPWEMSALTGALMIVFFYLFYDF
YTSAYKKRREGGRSKAVEVTQNGKKHE
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mRNA from alignment at LSalAtl2s309:46456..47355-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005708-701555 ID=EMLSAT00000005708-701555|Name=EMLSAT00000005708|organism=Lepeophtheirus salmonis|type=mRNA|length=900bp|location=Sequence derived from alignment at LSalAtl2s309:46456..47355- (Lepeophtheirus salmonis)
ATGGTGGTAGAATGGTATAATTCAATGTGGGAGCATCGAGATAAAAGAAT
RGATGGATGGTTTCTTCTTGGCTCTATTTGGCCAACACTGATCATGTCTK
TAGCCTATGTATTCATGGTGAAGATTTTTGGACCAGCTTATATGAGTCGC
AAAAAACCAGTAGACTTTAAAAACTTTATGATGGCTTATAACATAGTTCA
AGTAGCTTCATGTGGGTGGATGCTTCGACAGTTCTGGATCGGAGGTTGGG
GAACTTACTACAATTATTGTGAGTGGTAGATTATTTCCTCATTAATTCAT
TCTGGCGAATTGTTACAATTTTGTTTTTATGTAGTTTGTCAAAAAGTAGA
TTTGGATGACCGTCCTGGATCTAGAGCAATGATTATGGCCACTTCCATGT
ACTGGTTTTACATGAGTAAACTCCTGGATTTTGTGGACACTTTTCTATTT
GTTGCCCGGAAGAAAAACTCGCAAATCACAACCCTTCATGTCTTTCATCA
CGCAATCATGCCACTCTACACTTGGATGATGGTCAGMTGGATCCCAGGAG
GACAAGAAACTTTTGGAGGACTCCTCAACACATTTATTCATGTTCTTATG
TATTCCTATTACTTTCTCTCCGCTTTAGGGGATTGGATTCAGCCCTATCT
TTGGTGGAAGAGATATTTGACTCAAGCACAAATGGTGCAATTTATACTTA
TTTTCATAAAATGTACTATTATAGTGAGTGGAKTAGCCTCTTGTGGATTC
CCATGGGAAATGTCTGCTCTCACTGGGGCTCTCATGATCGTATTTTTCTA
TTTGTTTTACGATTTCTATACTTCAGCTTATAAAAAGAGAAGAGAAGGAG
GAAGGTCTAAAGCGGTCGAGGTTACCCAAAATGGAAAGAAACATGAGTAA
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