EMLSAT00000005821, EMLSAT00000005821-701668 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000005821
Unique Name	EMLSAT00000005821-701668
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s314	supercontig	LSalAtl2s314:108191..114706 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000005821 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000005821	EMLSAG00000005821-688587	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000025420	EMLSAE00000025420-734348	Lepeophtheirus salmonis	exon
EMLSAE00000025421	EMLSAE00000025421-734349	Lepeophtheirus salmonis	exon
EMLSAE00000025422	EMLSAE00000025422-734350	Lepeophtheirus salmonis	exon
EMLSAE00000025423	EMLSAE00000025423-734351	Lepeophtheirus salmonis	exon
EMLSAE00000025424	EMLSAE00000025424-734352	Lepeophtheirus salmonis	exon
EMLSAE00000025425	EMLSAE00000025425-734353	Lepeophtheirus salmonis	exon
EMLSAE00000025426	EMLSAE00000025426-734354	Lepeophtheirus salmonis	exon
EMLSAE00000025427	EMLSAE00000025427-734355	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto772344	auto772344	Lepeophtheirus salmonis	polypeptide
EMLSAP00000005821	EMLSAP00000005821	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s314:108191..114706+

protein sequence of EMLSAP00000005821

>EMLSAP00000005821 ID=EMLSAP00000005821|Name=EMLSAP00000005821|organism=Lepeophtheirus salmonis|type=polypeptide|length=480bp
FQPSCKLCLEGQDKPFCKPNQVQVYGVAKHEQIRISCDVIANPSADMTFD
WVFNTSSERIDLQQNRIDVHGSRSLAIHTPQTELDYGSLMCWGKNYIGKQ
EEPCVFHLIPAGKPDPAKNCSVQNQTYFSLQLTCHEGFDGGLTQTFTIMV
KDTKTSFIVANTTNVKPVFHINGLRPGTSYALSVXSSNSKGASNPIILHA
FTMKEAQKRVIQTPHLRSREFVFSPILMGLMIVGGALIIVFLFISIYFCA
CRRSPDKIRNRISYTETHVPLQKGIDDCIEVDEKNPDIIPISSSPRIGDC
GIEEDGGFGVYGDKTRFATLQKQKTDYDTLRCIPSLNAYALKNSFRLTHS
QEVTYAELSLPRGKGYTPMKKQSMPVYANLNGGGVCLNTSTXSSXASSSG
CLKSGRNSSGDEGFNSASTPAPTNGGSGSSSSSSSLLSPKRVVLHKPVVV
LDSSAQTGFYNPRMNERIWPNDGEGLGLWI

mRNA from alignment at LSalAtl2s314:108191..114706+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000005821-701668 ID=EMLSAT00000005821-701668|Name=EMLSAT00000005821|organism=Lepeophtheirus salmonis|type=mRNA|length=6516bp|location=Sequence derived from alignment at LSalAtl2s314:108191..114706+ (Lepeophtheirus salmonis)
TTCCAACCGTCTTGTAAGCTTTGTTTAGAAGGTCAAGGTAATGAAAATTA
ATTAAAAAAGTTATTATTAAAGAATATATAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGG
ATTATTTTTACTTAGACCATTTCTATTTTATTTTTTCGGAAATTAAGGGT
AGATCGAAAGACGTTTCGATCCCTGTATTGATCAATATATTAATGATAAT
TCACAATTTTCTTTGAAAGGGAATTTGTTTTCACCAAAAAAAAAAAAAAA
TTTAGCTATTTGATTATGGATACCTATATATATTACTCGTWTTKTATYTA
AAGTCTTAATCATGAAAAAWAATTGTTGCACTGTAGGTATCATGGAAGCG
TTTTATAATTTTATTCATTACATTTTACAAAAAATAACCAGTTGATGTCA
TGTTTGGTTAATTTTACCTCACTTCTGTATTTTAAAACATGTGATACGCA
AGCCAATTTATTTATACCTATGTAATCTCGAAGTATTTTAATCTAAATAC
CATATACTTAAGTATATGCATTTTAATTTGTCTTTTTATTGTTCTTTTAC
ATAGATAAGCCTTTCTGCAAACCTAATCAAGTACAAGTCTATGGTGTTGC
AAAGCATGAACAAATCCGTATATCTTGCGATGTTATTGCCAATCCTTCTG
CAGATATGACCTTTGATTGGGTTTTTAACACTTCCTCAGAGAGAATTGAT
CTACAACAAAATCGCATTGATGTTCATGGCTCACGATCTCTGGCTATACA
TACACCACAGGTATTGTAAAATATATACATAGTGTTGTAAATTATAAGCA
TTTAAATTATGTATAAAAAAAAGTACTGTTAACCCAGATGATTTGTAGAA
TGCCCTGGAGAAGAGAGAAGCTTAGCTGCTATGACGTTTTCTTAGATTAA
CTAAAAGCAACTATGACTGAATCAAATTTACTATGAGTCCGACTGACTTA
ATTATAATTGTTATTTTTCTATTAGTCATTCATACGTCCAGAGATTTTAT
GACTAGATGTACTTTTCTCAAAATTTTAAAAAATTTACATCTTTGTAAAA
TAAAAACATAGCTTAGAGTGCCAACTACAATCAATTTCACACACTATGAA
ATGCTTTGAATTTACAACTATATATAATTGTCTACAACTATATACTTAAT
TATTTCTTTATAATGATACTTCGACAATAATAACCTTTTTATCACATTTC
TATAGACTGAATTGGATTATGGTTCACTCATGTGCTGGGGTAAAAATTAT
ATTGGAAAACAAGAGGAGCCGTGTGTTTTTCATTTGATTCCAGCTGGAAA
ACCAGATCCAGCAAAAAACTGTTCAGTACAAAATCAAACCTATTTTTCAC
TACAATTAACGTGCCATGAAGGTTTTGATGGAGGATTAACTCAGGTAATG
TTAATTTACAAACAAACTTTAGTATATATTTTGCTTCTGGGTCATATTTT
TAATTATCAAGTCATGCTTTGGTTGTTAAAAAATGTGTCTCGTTAAATTG
CGGGTGTTCCACTATTCAAGTAATGAGAAAATAAACCCTATGTATATTTT
AGATACAGTTACTTGCCCTTTATGTGTCATGTCTTTTAAGAATCATTGTA
TTATTCCAAGGAGATGCTTTATGTTATATAACATAATTTACTTGATACAA
TTATATTCTATTGCATAAACGTGAAGTAGTAGAGTTTTTCGGTTAATTGA
AAGTTGTAATTTGACATTAAAAAACAACAACCTAGGGCTTTGTAATTTGT
TGTCGGTCTACTTGAGATGTAATTATAAAATTAAGGCATTAAAAAAGATA
AATTGTAGAGCATAATATCAAAATTTTTGACGGATGGAAATAATAGAGAA
CAGAATTAAAGTATATTTTTGTAGCTACCTGTTTTCAATTAGGTAAATAC
AACATGGGACAGGGCCGCCACATGTAATGATACATCAATTTTTACCTATT
TGGTTGATTGTAAATCATCGCTGTCATTCTGTGGCTCAATTTACCAATTA
CAACAACCATAACTGGGACACCGAAAATATAGGTTCATGAGACCCCCTTA
TGTGTATTTTATTTTTCTTCATTATTGATTAATGGATAMTCTAATAATAA
TCATTTTCCAAACCTCTAATAGTTATTGTATATACGTATAGTAACAGTAA
TTGATGAAACATCCTTTCAGACTTTTACAATAATGGTTAAGGACACAAAG
ACCTCATTCATTGTCGCAAATACAACAAATGTCAAGCCCGTATTTCATAT
CAACGGCCTCCGACCTGGGACATCCTATGCMCTCTCTGTCMCCTCTTCCA
ATAGCAAAGGAGCCTCTAATCCCATTATATTACATGCATTCACCATGAAA
GAAGCTCAGAAAAGAGTTATTCAAACACCACATCTTCGCTCACGAGAATT
TGTTTTCAGTCCCATACTCATGGGCCTTATGATAGTTGGCGGGGCTCTTA
TCATTGTTTTTCTCTTTATCTCAATATATTTTTGTGCGTGTCGAAGATCA
CCTGATAAGATTCGAAATAGAATTAGCTATACGGAAACGCATGTACCTCT
TCAAAAGGGGATTGATGATTGTATCGAAGTGGATGAGAAAAATCCGGATA
TTATTCCGATCTCTTCTTCTCCACGAATTGGTGGTGAGTTTTTGAAAAAT
TGGTTACTTAAATGTAATATAATTTCTTAATTTATTCCGACAGATTGCGG
TATAGAGGAAGACGGGGGTTTTGGAGTCTACGGCGATAAAACGCGATTTG
CTACACTTCAAAAACAAAAAACAGATTATGACACGCTGCGATGTATCCCT
AGTTTAGTAAGTTTTTATTTCATCAAATAGTTATTTATATAAGTGGTAAA
CCGCAACATAAAACCAACCTGTCAAAAAGGAATAAAAATGATTTATTTTT
TTGCTTTCTTTAAAAAATCATTACACATTTTTGACCTTAAATATTGACAA
CAAAGGTAAAAAAATTCAATTACTTTGCTAAATAACTTACCCTAAAAATA
TAAAAAAGTTTTATTTTTTAATTTGTCAAAATTGGAGATTATCAATTTTA
TACTTAGAAAATGATAGATTTTTTACTAACGCAACTGACTTACTGCTATT
ATTGAGCTTTTGATTAATTAAGAAATTTTTCTTCGCAAGTTGTATTATTT
CTTCATTAAATAAAATATTTACAATGATTGATTCATTAATCCTTGCAAAT
TTTAGACCCAAATAATACATTAATTGCAGTTTGATTAAAAACCAACGCTA
AATTAACATTTTTAGATTGAAACTTAATTTGAAATTATTAACTTAATGTT
AAAATTACTCATTTTTTCCAATTGTTGAAGGATCTTTATTTTCTTTTTAT
AAATGTACTCCCTCCATGTGCAGTTTTATGTTGTATATATTAACAAATAT
TTATGTAGATTACAGAATATTTTATTTCATCATTGGGTTATACGTCTGGA
ATGCTGTAACGAASTTTTACGCATATAAAATAAGGCGTTTTCTTATGAAA
AGTAGTTTTTCTACAAAGAAAAACTAATATTAATAATAATGGATAGATTA
AGGGGAAAAATAAGTGTTAATAGCATATAATTGCTCAATTATTCCCCTCA
CTATGAAAATAAAAATCATTACATTAAATAATAATGAACTCGTGACGTAA
AGGAATAATAACATTCGATTAAAAAAATTTAAAAACTTCCTTTTCTACCC
ACCCAAGATTATCATTAAAGTATATATAACTCTTGGTACATAGAGGGTAA
ATATATTTTGACATACATACGTATTTAATGTACCATGAAAATCTTATATA
TTCATATTGCTAATTAAAACTCTTGAGATTTTTTAGTAGCTTTTGTAAAT
GTTAAACGTCTTAATTGCTACATAATCATTTTCAAACATGAAAATACTTA
ATCAAATAAATCTTTGTTTGGTCATATTTATACAAAAAGAGTATTTTATG
TATAAATTTGAATATATTATGACCTAAATGAAATATGCAGCCCATCAGCA
CCAAAAAAACGAGTGTTAGTAGTATTATTATAACCATTTTATTTCAGAGG
CTCTATCGGAGTAAATAATGTCTTATGGATAAAATAGGCTTCAAACTATA
GGKTATATTCGTGGAAATATTTCAAGCCCTCCTGCAAATTTAATTATGTA
ATCAAATATTTGGAAATATTTTTTTTTGTCAAGATGGCTTTTGAGTTGAC
GTACTACATTTTGATTTATATGATTAGGATGACCTTTAGGCTTCAACATT
ATGTTTTATAAATAAATTTACAAATTGATTTTAGAATGCATATGCATTAA
AAAATAGTTTTAGACTCACTCACGTTAGTTATGAAGCTGATTCTAAAAAT
TTATAAATTTAGTATTTTACCACTTATCTGCAAGAACACAGAATATTTTC
GCAAGTACAAAATAGTTTTTAAGTTTTGTGTGTAAAAAAACTCTATTTTT
GAAAAAAGTACGCTATTTTTTATTTTATTTTTTATTAGTAGAAAAGTTAT
TAAATGAAAAAGAGAATTATTTTAATAAAATAGTGTAATGACTTTCTTCA
GGAGTGAAAATAACTATTTACATTTATGATTTGTGGGATAACATAAAAAA
ATACCTTACCCAAACAATGATTTAATTCCTTATAACATTTTACAACTATT
ATACTCTAAGAAATGGCCCCTTAGTTAGTCAAAAAAACAACCAATTATAG
AATATAATTTGTAGAGTTCTTCAATAAAATATTCATTTATCTGTTTATAA
TGTCAAACGCCCCTATCGTCTACAAAAACATCTTAAATAGAAGACTTTGA
TTCTTAAAATCAAAAACCGTACTCCATGGTAAAATCTGCACTAATCACAT
TATGACTAAACTAGATATTTCTGTATTTGTTATAATTTATTATAATGACA
TAAATGAAGTATATAATTGACATACAAGTGTATTTTATATCTCCTATTTT
CCAAGTAGCTATTTTTTTATCTAGGATTAATAGTTGTTAAGAAATCCATT
TGTTATTAAAACAAATCGACGTGATATCGCCGAACTTATTTTCAGTTATT
TCTATCATTACGAGTAAATAATATGCATTAACATTGATAACCCATATTCT
CAATAATACCATAAAGTATTTTTGCATTATATTTCGCCTACGCTTTATCC
CCTAAAATTACCTACATGCATATCTATTTTCTGCTTGTATATACATAGAG
TAGAGAAGGTCATTAATCCATAAAAATATTTCTTTATTGTTTTTCTCTTT
ATTTCTTTACTTTATAGAGCCAAGAAGTCACCTATGCAGAACTCTCATTA
CCGAGAGGAAAAGGTTATACTCCAATGAAGAAGCAGTCAATGCCTGTTTA
TGCGAATTTAAATGGTGGAGGTGTCTGCCTTAACACATCAACAGMCTCTT
CAYCTGCCTCATCCTCCGGTTGCTTAAAAAGTGGCCGAAACAGCTCCGGA
GATGAAGGTTTCAACTCTGCTTCTACACCGGCACCAACAAACGGTGGGTC
AGGATCTTCCTCATCCAGCTCCTCTTTGCTCTCTCCTAAACGTGTTGTCC
TTCACAAACCTGTTGTTGTCCTAGATAGCTCCGCCCGTGAGAGCTCTGTC
TAAATAAAACCATATTTGATCTTATTAAAAACTAAGTTTTGAATCCTTCC
TAAGAGCTCCTCAATACATATTTGCATGTTCGTCACAGATCATTCACCCT
TCTTCATAGAGTTATAATACAAAACACGTGCCATATTTAGAAAAAAAAAA
TTTTTTTTTGTATTATACGTTGATCAAGACCCAAAAAACTATGNCAAAGT
CGTATTAATTCCCTGTAAATTCACAGAAAAAGTTTTGATCTTCGTAGTAG
GTAAGAATTTTAATTATTTCATTTTATAAGAATGCATGAGTTTAATAAAT
TTTATTACCTAACAACATAGTTAGTTGACTATGTATATTAGTATCCATGT
GTCTATAAATATATACATTTTTATGATGATATCAAATACTAATTTTTATA
AAATGCACATGTATCAATCTATCTTTAAAAAGTTATCAACAACAATTTAT
CACTTTAAAAATTACAAGACCTTTTTGTAATAAGGCAAATTAAAAAATAT
ACTATAAAGATATCACCTTTTATAATTTATTTCTTTTTTAGAAACTGGAT
TTTACAATCCAAGAATGAATGAAAGAATTTGGCCAAATGACGGTGAAGGA
CTAGGACTCTGGATCTAAAAACAAAAATAATTGAAGAGTTGAACCACGCA
GATATTTTCATAAAAAAGTGAAAGTATATTTGATTTTTCTCACATAATCA
CAGTATTTATAAAAATATTTAATAGTATACAAGGAACTGGGTCTTAAATT
TAAATGAATGTTTACG

Add to Basket

Search form