EMLSAT00000005834, EMLSAT00000005834-701681 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005834
Unique NameEMLSAT00000005834-701681
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s315supercontigLSalAtl2s315:406465..407650 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005834 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005834EMLSAG00000005834-688600Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025475EMLSAE00000025475-734403Lepeophtheirus salmonisexon
EMLSAE00000025476EMLSAE00000025476-734404Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777353auto777353Lepeophtheirus salmonispolypeptide
EMLSAP00000005834EMLSAP00000005834Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005834

>EMLSAP00000005834 ID=EMLSAP00000005834|Name=EMLSAP00000005834|organism=Lepeophtheirus salmonis|type=polypeptide|length=266bp
MMAFNFEEEMSRFEAEINRXSTISAAAKVNFVPPATRVTKKDEEDVFNXL
LKYEKEIQQEKNHTSKPSKKSRSSGLMKPTAVTAQEISTKAKQVLEEKAK
VVKPKILVKNPGPQASSSSSSLGTASHGNTSEESNKKNRKPKKIVRVGGG
QLWEDESLKDWERNDYRIFCGDLGNDVTDEVLSRTFSRYSSFMKAKVIRD
KRSNKTKGYGFVSFRDPQDFTRAMREMNGKYVGSRPIKMRKSNWKDRNLE
IVKHKQKQKQAMGYKW
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mRNA from alignment at LSalAtl2s315:406465..407650+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005834-701681 ID=EMLSAT00000005834-701681|Name=EMLSAT00000005834|organism=Lepeophtheirus salmonis|type=mRNA|length=1186bp|location=Sequence derived from alignment at LSalAtl2s315:406465..407650+ (Lepeophtheirus salmonis)
TTTGATTATGATAGCATTGACTAGCTAGTCTACTAATATTCTTAATTTTT
GTTAAATACGCTCTTCCAATTCGATCCCTCAAGTAATATTTTTTCCGGAA
AAATAAACGAAAGAAGACTTTCGATGATGGCCTTCAACTTTGAAGAAGAA
ATGAGCCGATTTGAGGCGGAAATTAATCGTMCCTCTACCATAAGTGCTGC
AGCTAAAGTAAATTTTGTTCCTCCAGCGACTCGTGTAACAAAGAAGGACG
AAGAAGATGTTTTCAATMCCCTCCTCAAATATGAAAAAGAAATTCAACAG
GAGAAGAACCATACTTCCAAGCCATCCAAGAAATCTAGGTATTTACATCC
ATAAAGGCCTATTTATTTCATACGTTTAACCTGCCCTTATCCTTGATACA
GATCCTCAGGTTTGATGAAACCCACAGCCGTCACAGCTCAAGAAATATCC
ACAAAAGCCAAACAAGTCCTCGAAGAAAAAGCCAAGGTCGTCAAACCCAA
GATCCTTGTCAAAAATCCTGGCCCTCAAGCATCTTCATCCTCTAGTTCCT
TAGGAACAGCATCTCATGGAAACACTTCAGAAGAATCTAATAAGAAAAAT
CGGAAACCTAAAAAAATAGTTCGTGTCGGTGGAGGACAACTTTGGGAAGA
TGAGTCTCTTAAGGATTGGGAAAGAAATGATTATCGTATATTTTGTGGGG
ATCTCGGAAATGATGTAACGGACGAAGTCCTTTCTAGAACTTTTTCCAGA
TATAGTTCTTTTATGAAAGCTAAAGTGATACGTGATAAAAGATCAAATAA
AACCAAAGGTTATGGTTTTGTAAGCTTTCGTGATCCTCAGGACTTTACAC
GAGCCATGAGGGAAATGAATGGTAAATATGTTGGGAGTAGACCTATTAAA
ATGAGAAAATCGAATTGGAAGGATAGAAACCTAGAAATTGTTAAGCATAA
ACAAAAACAAAAACAAGCAATGGGATACAAATGGTAAATTAATTACTCAT
TCATGAAAATCATTTCAAGGACAATTCATAATTAATTCATCTGTAATAAA
TTAAATTAATTTTGGGATATGCTGTCATATGTTATGTTTTGTCTTCATTG
ACATTACCAATTTCTTAATTTATGTGGTAACATAATAAATATATTCAACT
TTTAGATTTCGTTTAAAATAAAAAAAGATCTTCATA
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