EMLSAT00000005837, EMLSAT00000005837-701684 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005837
Unique NameEMLSAT00000005837-701684
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s315supercontigLSalAtl2s315:56674..59396 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005837 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005837EMLSAG00000005837-688603Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025497EMLSAE00000025497-734425Lepeophtheirus salmonisexon
EMLSAE00000025498EMLSAE00000025498-734426Lepeophtheirus salmonisexon
EMLSAE00000025499EMLSAE00000025499-734427Lepeophtheirus salmonisexon
EMLSAE00000025500EMLSAE00000025500-734428Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770917auto770917Lepeophtheirus salmonispolypeptide
EMLSAP00000005837EMLSAP00000005837Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005837

>EMLSAP00000005837 ID=EMLSAP00000005837|Name=EMLSAP00000005837|organism=Lepeophtheirus salmonis|type=polypeptide|length=300bp
MQDRATENSGVVVDKGKEPFLMSATGLAGSGASAQNLGKRIVKRRRSEDS
GGXSSDPRSISPMDLTSKGHSSSSSGQHSPQDLSSGGGGRIHHEQKEEKV
KRRRLDDILHRKFPSSSPTTSNAAAHLHHLHHTTPLSSRKRKHPESPCIL
SEEEEDPSVRAGRFLQLAALMNSDIFKTNPLLYYGYYAQLIQNIRRSSEE
EEHKILNKKVNINNNTLGDSTPTPFGAYTSPEARQKIKSTNEEPRHKRAP
RALTGRHVRPGTGASPRTLALLRQKIQERLRLREEAEACRKPPKKSKKSH
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mRNA from alignment at LSalAtl2s315:56674..59396+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005837-701684 ID=EMLSAT00000005837-701684|Name=EMLSAT00000005837|organism=Lepeophtheirus salmonis|type=mRNA|length=2723bp|location=Sequence derived from alignment at LSalAtl2s315:56674..59396+ (Lepeophtheirus salmonis)
CCCCATCATCCCAAGGAATTTAAAGAATTACTATTATTGTAAGTTTGTTC
ATACATTTATATTTGTTCAAATCAAGCCATCACTACTTTTCCGTCATTTC
CCATATTTTTATTTCCCTTTTTTATATTTATTTAAAAAAAATTAGTTTAG
GATTTCAACAAGTTTCTTTTTTCTTTGACGTTACGTTTTTAATCGCATGC
CTTTTCCCGGAAATTGGAATATATTTTGATATAATAACTAAATAAAAATA
YATTTATAAATATATYGTAGATTATATTTCAAGATGTTCTATTACCCCTT
TAATAAATAATTATAAAAGGATCTTGAAACTTAACTTACTAAGCAGTCAT
GTTTTTTTTGTCTTTTTTTTTACCGGATATGAATGGTAATAAACATCACC
CATGAATTTTTAAACTCTTTTCCTTTTTTGGGAGAGTTTAATGGTATTGG
TTGCTTGGTTGGTTCTAGGGCGAAATTAATGTACTTTTTTTATTGTAGAA
TAATTTGTTTGACATTAAAATATTTTAATTATTATTTTAATGTCTTTATT
TTACATAATTTATTTTTATTTTGCAAATTCATTTCCTTTTAGTGAGTTGG
TGACTTATTCTGCGATTTTTTACTCAAATATCCGATTATGTATATACTTT
GTGTACAAGTAGCAATTTTGTACAAGTTGTAACTTGGATAAGTAGACTAC
AAGTTACAATTACTAATTTCTCATAACGCCTTATTTAATTGCTACAACAT
CATTCATGTAAATTACCCATGGTATTAATTGATCATATTATCTGGGCTGG
CATTAGGCGACTGCAGTTGCACACTTTGTCTAGGCCTGGCACTTGATTGG
AAAAATAAATTTAGAACATATTGTTTTTTAAAAGGAGTCATTTCAAGAGA
ATGAGGAAAAAACCTTAGTAGTAATTTTATTATTATTCAAAAGTTATTAA
TTAATATCCTTATCCCTACTGAAATTGGGATTTGGACCCCACGCCATCCG
TTTTGTTTAGGGCACTGAAATAGCTGAGGTACACCCTGGCTATTATTTCA
TTTTTATTGAATAAAATTAAGTATTGATTATATATTTATGTGGTAGTGGT
CATTTGAAATTGAATATGTTTACATAATTACTTATTAATTTTCATTTAAA
TATTCACAAATTCTACCTTTAATTTATGGACCATCTAAAAAATATTAAGT
AATTATATTATCCTTATTATAAAGACTCTAAATTTTGCATTTAAAATTAT
TGGTCTCATTTTTTTTGGTAATGGTAACTTCTGCATGACATATTTAATAT
TTTATTTATAAGTAATGAACAATATGCATAATAAATAATAATCGTATCCA
ATAGATCAACTGGACTTTGTTGTTTCTCCTTTTTCTTTTTCCTTTTTTGT
TGCCTTATTATCAAACTTCTTAATGCTGATTTCCTTAGGAGATCAGTCGT
AGTTCATTTATCGTATGGGTTGTGTCGAACTTTTCTTCATCAACAGTATA
AATAAGTTCCCCTTCTGTTTAATTTATTTCCAGGTCCCCCTTCTACTTGA
GTGTATTTTTTGAGGCTTGAATATATTATCATAATTCGTTATTAAATAAA
GAAGCCAGCAAGATGCAGGACCGTGCGACAGAGAATTCGGGCGTCGTCGT
CGATAAAGGAAAAGAGCCCTTCCTCATGAGCGCAACAGGTCTTGCCGGCA
GTGGTGCGTCAGCGCAGAATCTAGGAAAAAGGATTGTTAAACGAAGAAGG
AGTGAAGACAGTGGWGGGKCTTCATCTGATCCACGATCTATTTCCCCAAT
GGATCTTACATCCAAAGGCCATTCCTCCTCTTCTTCTGGTCAACACTCAC
CTCAGGACCTCTCGTCCGGCGGGGGCGGCCGCATACATCACGAACAAAAA
GAAGAGAAAGTGAAGAGACGAAGATTGGATGACATCCTCCATAGGAAGTT
CCCATCCTCTTCTCCCACGACCTCCAATGCAGCGGCACATCTACACCATC
TTCATCATACTACTCCACTCAGTTCTCGCAAAAGAAAGCATCCTGAGTCT
CCATGTATCCTGAGTGAAGAAGAAGAGGATCCATCCGTTCGTGCAGGGAG
ATTTCTTCAACTTGCAGCACTCATGAATAGTGATATATTCAAAACGAATC
CCCTACTTTACTATGGTTATTATGCTCAATTAATTCAAAATATTCGACGA
TCCAGCGAGGAAGAGGAACATAAAATCCTTAACAAAAAAGTCAATATTAA
CAACAATACTCTAGGAGACTCGACTCCAACTCCTTTTGGAGCATATACTT
CACCAGAGGTGAGATCTTAACCATCGATCATTATATAATTATATGAATTA
TGCTCAACAAATCATCTTTTATTCATTTCAGGCTCGACAAAAGATCAAGT
CCACAAGTTTCAACCTCAGTTCTCTCCTCAGCMCCCCTTCAYCCCCCTCA
YCCGCCACAAGTAGCCCAGTCACAAAYCGMCCTMCCGACATAACCCCTCC
AYCAYCCTAYCCCGAMCCTGCATCAYCCCCAGCCTCTTCTCCAGATGAAG
AACCACGACATAAAAGAGCCCCAAGAGCATTAACCGGAAGACATGTACGA
CCTGGAACTGGAGCAAGTCCAAGAACACTTGCATTACTTCGTCAAAAGAT
ACAAGAACGTCTACGACTACGAGAAGAGGCAGAGGCGTGTCGGAAGCCTC
CTAAAAAGTCCAAGAAAAGTCAC
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