EMLSAT00000005847, EMLSAT00000005847-701694 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005847
Unique NameEMLSAT00000005847-701694
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3173supercontigLSalAtl2s3173:4763..10691 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005847 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005847EMLSAG00000005847-688613Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025543EMLSAE00000025543-734471Lepeophtheirus salmonisexon
EMLSAE00000025544EMLSAE00000025544-734472Lepeophtheirus salmonisexon
EMLSAE00000025545EMLSAE00000025545-734473Lepeophtheirus salmonisexon
EMLSAE00000025546EMLSAE00000025546-734474Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768495auto768495Lepeophtheirus salmonispolypeptide
EMLSAP00000005847EMLSAP00000005847Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005847

>EMLSAP00000005847 ID=EMLSAP00000005847|Name=EMLSAP00000005847|organism=Lepeophtheirus salmonis|type=polypeptide|length=298bp
MFPTVRASFQNLRSDRKYWVILDIVPCDNKRYRYAYHRSSWLVAGKADPP
PPKRFYIHPDSPFTGDQLRKQVVSFEKVKLTNNEMDKNGQIILNSMHRFQ
PRVHLVSRPAYIDQGPILNIERENHHTWIYPETVFTAVTAYQNQLITKLK
IDSNPFAKGFRDSSRLNDYETELYGFPPSPHHHLGLHPAMFLDSNLLLRS
PFMSANNDENANGGGGINNNNNVMVAAEKARTMMMMAAAAAAGRPHQMMD
PLQXXATTPRLPSPWNHPSYQRFSPYVLPHKRSPSPSLSPGSDKIGRK
back to top

mRNA from alignment at LSalAtl2s3173:4763..10691-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005847-701694 ID=EMLSAT00000005847-701694|Name=EMLSAT00000005847|organism=Lepeophtheirus salmonis|type=mRNA|length=5929bp|location=Sequence derived from alignment at LSalAtl2s3173:4763..10691- (Lepeophtheirus salmonis)
ACGAATGTTTCCAACCGTGCGTGCCAGTTTTCAAAATCTTCGATCTGATA
GAAAATATTGGGTTATTTTGGATATTGTTCCATGTGATAATAAGCGATAT
CGCTATGCTTATCATCGATCCTCCTGGCTTGTTGCTGGTAAAGCGGATCC
TCCACCGCCAAAGAGATTCTATATCCACCCTGATTCTCCTTTTACTGGGG
ATCAATTACGAAAGCAAGTCGTCTCCTTCGAAAAAGTCAAATTAACGAAT
AATGAAATGGATAAAAATGGACAGGTAATAAGAGTTGGAGAGTTTTTGGA
GGGGAGGAGGTGTCCTGCCCGTCTCATTAACTTTGTACATACACTTTAAT
TTAAGTTGTGTGGGAGGTAGAAATGAGATGGCTCTATGATGAGGGTTTTT
TGTTATTTTTTATTAATAGTTTGTATAATAAAAATACTGCTTATTCATTC
CTTTTGATGTAATCCCATTCGAGATCCCCATTCCCAATGAGATTACATTA
CGTTGGGGATTTATGTACCCAATCTACTAGTGTTGGGTTTCGGTTTGATA
ATACTAGACTGCCCGAGACCTTTATTTTTTTGATGGACCGAACTAATCTG
TCCTTCAAAAAAGTTTGAGTGTGGATTGTTCACATTTAAAACGCTTTCTA
GACTGTATATATAAATCAGTGATTCCCAACGTGTGGGACTCAACCCTAAA
TGGGAAATGTAGTGATTTTGAGACAAAATTGAACCTTATAATAAATATAG
TCACAGTAAAAATTTATACAACTGCCTTGAATATGTTTTTCACAAAAACA
CTCAATGTAACAGTTCCCTAAGTCACTCGACAGAGCATCTGAGCCAGTAT
TGATCATGTTTGGCTTCTTTTGTGTTTTTGTCACACTAAAGCTGTTGGTC
CGCTCACCGAAATTGTAGCCAATTTCCGGCTTGACATAGCCCAGTTTGGT
AGCATCTGGGTGATTTTTTTCATTTAGTGGCTAAATTTTTATAAGGATAA
CCTACTCATGGTGTTCAAGGCTACTTTGTTGGTTGTCAAAGATGCTTGAA
AATCTCCATTTTTGACTCAAAAGCATCACCAATTCCGTGTGAAGTGTATG
GTTTTCTTAATGGCCTCAACCCTATGGTGATGGGGTGATTTTCTTCTCCA
ATGAAGACTGTACTTAATGTGCATAAATCATATCTGTACTACTCAGAAAT
CAAGAGTAGAGATAAATATTAAAAATAATAAAATTCGGTCTTGGACCGAA
TCTCAACACTAATGATTAGCTGGGTATTGAATCACCCTGTAACGGTTTTT
TTCTCACTTCTTCAAAATATGTACATATAGTAGGGTAGTTATGATAGGTG
CGTACGTAACCTAGAACCTAATCTGTCATAGAAGGAAAATAATAATAAAA
TAATAAATGTCMCCCTCCACAGACATAGAGCGAGCTGCTGCCTGAATGTC
ATTCAAGCATATCTCGACCAACCACGACGATGACTTAACGTACATGTTTC
ATATTTTCACATTTCAATCATATTTTCATTTATTTATAGATTATTCTCAA
CTCAATGCATCGCTTCCAACCCCGAGTTCATCTCGTCTCTCGCCCAGCAT
ACATCGATCAAGGACCCATATTAAACATTGAGCGAGAAAATCATCACACA
TGGATATATCCCGAAACTGTTTTCACAGCCGTAACAGCCTATCAAAATCA
GCTCATTACCAAACTCAAAATCGATTCAAATCCCTTTGCCAAGGGCTTCC
GAGACTCTAGTCGACTCAACGACTACGAAACAGAGTTATATGGATTTCCT
CCCTCTCCACATCATCATTTGGGGCTACATCCAGCCATGTTCTTAGACTC
CAATTTACTTCTCAGATCTCCCTTTATGAGTGCTAACAATGACGAAAACG
CTAACGGCGGGGGCGGTATCAATAACAACAATAACGTTATGGTCGCTGCA
GAAAAGGCCCGTACAATGATGATGATGGCTGCCGCAGCTGCGGCAGGTCG
GCCACATCAAATGATGGATCCCCTTCAAGYTGTMCTTCMCCATCATCATC
AGSCAGCCACGACACCCCGTCTTCCATCCCCATGGAATCATCCCTCCTAT
CAAAGGTTTTCACCCTATGTCCTCCCACATAAACGCTCCCCTTCGCCAAG
TCTATCTCCAGGGTCGGACAAAATTGGAAGGTTCTCYCCCAAAGTAAACG
GTTCTTCTCCMCCCCCTCCGCAAAGTAATACGCCACCCAAGAGCTAATAT
GGATGCAACACAACAACGGCCAAAGCTCCCCAGACCTTTCTTAAATCTAT
CTCTCTTTATCAATCTATCTATCTATTTCATTATCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAA
GAGGAGAGAGAAGAAAGAATGAGAAAAAAAAAAAGGAGCACGGAACAANA
AANAAACTATTCTTCAAAATTATTATACCCTACTCCTTCTCAAACCCTGT
TGCTGCCCCTATTACAACAACTACTGGAAACCATACAAAGCAGATGTCCA
ACTAACATACATACATTGAGAAAGAATTCGTGCAAACACAAATAGCACAT
AAATAATATGTAGTTCGTCATTTAATATGGAGAAGGGACTCGATTTCGTG
ACTCCCTCTATTTGGAACAATTCATCATATTCTTCCCTTTTTCTATTTTT
ATTTTTTTATTTGAAAAAAAAAGGAGAGAAGAAAAAAATATTATTATTCT
TTAAATAAAATATGGGATCTTCTTGTAACTTCATATTTTATGTGGTCTGT
CTACATAAAAGCAAGTTAGAATGTGTTTGTTTTTTGTGTTCTTTAACAAA
TTACCATTAATTTCTATCAATAAATTATTCGCAGTAAATCTTTGGAAGCG
CCATAAATTGTACTTATAGTTGCAGTAAATGTTCAGCCTAACAATGAAAT
ATAATTACCCGTTTTCATTTAAAATTGCCTATCTCGGATCCAAATTACCC
TAATCACAAATCTAATGAAGTATTTATGCTATAGTTAACATTCTTGAGTA
TCTCAAATCACACCAGAAATCTGAATAGAAGGCCATTAATTGATCAATAT
ATGTTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATTATAGGCCTT
GTATTCAAATTTGTGGTATGAGAATACAACCCTAAGACATTCAGCTATAA
TTTAGAACGATTATTTGATTTATGCAACATAGATTGGGCCTATTATTCAC
CTATTCAAATAAAATCAATTAATTAATAATTATTTTATTATGACGATCCA
TTTTGGCTACAATATTCGACAGTAATTCGCTAACACAAAAATATAAACTG
TATTTTGTTTTGAGTTGTCGATGTGTCTGCTTTTTTTTTTCTTAATCACT
GTTCTGACTGTTTGGAGCTGGGGATAATAGATATTTCAAAACACAGGGGC
GTCCGCAAAGGGGGAGTTGAAGGGTCTGTAACCACAAAATAAAGGAATTT
TTGATTTTTACTCAAAAATTTAATATTTGAAAATTAATTTTTCGTGAATA
ACTGTGATTTTTTGAATTTTTTTCCAAAAAACTTAATTTTCGGTAAATAA
CAATGGATTTTCGAAATTTTTTTCCGAAAAATTGTATATTATAGTATAAT
GAATAGGAAAAAAATCAAAAATACATAGCTATCATAAAAAAATAAAGCCT
TTAGAATTATTTTTTTCCAAAAATCCAGAGCTGTATAGAAAAAACTGAAA
TATTTTGGGAAAAAAATTCAAAGATCCCAAATTGTTAAAAAAACTGAATT
TTTTGGGGAAAAATTTCTTAAATCAAATTTTAAAAAATTTAAGAAAACTT
AAATAAATTTGATACATTAAATTTTTTTTTTTTTTTCTTCAAATATTACA
TTTTCTAGTAARAAWAAAAATAYTTAAATGGGGGGGGGGGGKACAGGCCC
TAMAGCCCYCCCCCTGCAACGTMCCTGAAATGTGATCCACTCTAATTTTG
AGAAAACCCCTTCCAGCTTGCTTTTGTGCTGACACGCCCCAATTATCCAT
TCCTTTATTTTTTGTCAAGATTGTTTTAGTGCTAACGCATCACGTTTACA
TCTATTCATATTTAGAAACATACAAAAATAACAATTTAATATCATATCAA
ATAATATCATTTCTATTATTTTAACGTCATGTCATCATCATCGCATTGAT
GATGAAGAAAAGGACGGACAGAAGCGTTTTGACAAGAAAATAATTTCTTT
ATTGTAGATACATATATTATATATATTGTTAGGGAGCATATCTACATGGT
TTTAATATGTGTTTTTTTTTATTAGAAAA
back to top
Add to Basket