EMLSAT00000005878, EMLSAT00000005878-701725 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005878
Unique NameEMLSAT00000005878-701725
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s318supercontigLSalAtl2s318:449224..449952 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005878 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005878EMLSAG00000005878-688644Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025687EMLSAE00000025687-734615Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777788auto777788Lepeophtheirus salmonispolypeptide
EMLSAP00000005878EMLSAP00000005878Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005878

>EMLSAP00000005878 ID=EMLSAP00000005878|Name=EMLSAP00000005878|organism=Lepeophtheirus salmonis|type=polypeptide|length=242bp
MFLTRSDYDRSVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTKDGIVLAV
EKRITSSLMEPSTIEKIVQIXKHLACAFSGLIPDSKMLIDKARVECQNHW
FNYSEKMRIESVAQAVSNLAIQFGDSEVKGAALSRPFGVALLLAGMDERG
PQLYHMDPSGTYIRFDAKAIGSGSEGAQQSLQEKYHSSMSMDEAIKESMT
ILKQVMEEKLSESNVEVATVTKEDGYQILKGKSLETIISQLA
back to top

mRNA from alignment at LSalAtl2s318:449224..449952-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005878-701725 ID=EMLSAT00000005878-701725|Name=EMLSAT00000005878|organism=Lepeophtheirus salmonis|type=mRNA|length=729bp|location=Sequence derived from alignment at LSalAtl2s318:449224..449952- (Lepeophtheirus salmonis)
ATGTTTCTAACTCGTTCCGACTACGATCGATCCGTCAACACCTTTTCTCC
TGAGGGTCGACTCTTCCAGGTGGAATATGCGATCGAAGCCATCAAATTAG
GATCCACAGCCATTGGGATTCAGACAAAGGATGGTATCGTTCTGGCGGTG
GAGAAGCGCATCACTTCCTCCCTCATGGAGCCCTCCACCATTGAGAAGAT
CGTGCAGATCGMCAAGCACCTTGCCTGTGCCTTCAGTGGCCTCATTCCGG
ACTCGAAAATGTTGATTGACAAGGCACGAGTAGAATGTCAAAACCATTGG
TTCAACTACTCTGAGAAAATGAGGATCGAGAGTGTAGCACAAGCCGTCTC
GAATCTGGCCATCCAATTCGGAGATTCAGAGGTCAAGGGAGCAGCTCTTT
CTCGTCCCTTTGGCGTGGCTCTTCTCCTTGCGGGCATGGACGAAAGAGGA
CCGCAACTCTATCACATGGATCCATCCGGAACATACATCAGATTCGATGC
CAAAGCCATCGGATCTGGCTCTGAAGGAGCTCAACAATCCCTTCAAGAGA
AGTACCACTCCAGTATGTCCATGGATGAAGCCATCAAAGAGTCTATGACT
ATCCTCAAGCAAGTCATGGAAGAAAAACTCAGTGAATCCAATGTGGAAGT
GGCGACTGTTACTAAAGAGGATGGATATCAAATCCTTAAGGGAAAATCCC
TCGAAACCATCATTAGCCAGCTCGCTTAA
back to top
Add to Basket