EMLSAT00000005926, EMLSAT00000005926-701773 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005926
Unique NameEMLSAT00000005926-701773
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s31supercontigLSalAtl2s31:798422..801383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005926 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005926EMLSAG00000005926-688692Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025861EMLSAE00000025861-734789Lepeophtheirus salmonisexon
EMLSAE00000025862EMLSAE00000025862-734790Lepeophtheirus salmonisexon
EMLSAE00000025863EMLSAE00000025863-734791Lepeophtheirus salmonisexon
EMLSAE00000025864EMLSAE00000025864-734792Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779756auto779756Lepeophtheirus salmonispolypeptide
EMLSAP00000005926EMLSAP00000005926Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005926

>EMLSAP00000005926 ID=EMLSAP00000005926|Name=EMLSAP00000005926|organism=Lepeophtheirus salmonis|type=polypeptide|length=613bp
MPHSHSYVPRRRRRCSWSLLMGDGAYPRYLLNREMGLLSTRATGFSTDVN
AVVQQNYKNLLKSSPVEETLQFPNIFDPKKDGTHPPGGIYNLEFNTEGSL
LAAXTEXTXVLLFDPNSRKLVNTIVNAHDGCVNCVRFLDSRSFATCSDDT
TVALWDARYLKTKVRSLKGHANWVKNIEYSFKENLLVTSGFDGAIFTWDI
NKYSERGDDYSKILYLNALMRMRLTPSGDQMVISTMNGYILIIHDLSLKT
LKKDLEGFKPNLYRLLQVSGRPIPDALNYTHLFHAARNRTEIISDFAPNN
DAETIASLQVHPQGWVVVSRNISSDNRSEWCCVHDLHSYPTNPLEDEMIS
SSSSDQRSPSFSNEAPQPSNSENIFSRLSNFMSNSLSSPESLDHIIPIRF
HRRRGAGVGGGGGGDGEEVEDNSNEETERRPSAELGFSSLRMSVQRMIED
FQNHTQRQNNESDNNQGSSRIFLISPDNNQIFLIGPSSLSSSSSSSSNTS
MPKNPRIHRNINRLTHYIEESNTGRGLIKEVSFSSDGRIICSPFGFGIRL
LGFDSKCSELNRCLSTEQRQLTELGTVTGRHDEVVLSTAFSPNQYLLVSG
CLSGKISWYQPVL
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mRNA from alignment at LSalAtl2s31:798422..801383+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005926-701773 ID=EMLSAT00000005926-701773|Name=EMLSAT00000005926|organism=Lepeophtheirus salmonis|type=mRNA|length=2962bp|location=Sequence derived from alignment at LSalAtl2s31:798422..801383+ (Lepeophtheirus salmonis)
ATGCCTCATAGTCATTCCTATGTTCCTCGTAGACGGAGACGTTGTTCTTG
GAGTCTTTTGATGGGGGATGGGGCATATCCTCGGTACCTGCTCAATAGAG
AGATGGGCCTTCTAAGCACGCGTGCCACAGGTTTCTCCACTGATGTGAAC
GCCGTTGTGCAACAAAACTACAAAAACCTACTGAAATCCAGTCCCGTGGA
AGAAACCCTTCAGTTCCCCAACATTTTCGACCCCAAAAAGGACGGAACGC
ATCCCCCAGGAGGGATTTACAACTTGGAGTTCAATACAGAAGGGTACATT
CTCCTGCCCGCCCCGCCGCAGCCACTCTTTTCAAGACCCATACACTAATA
ATCTCCTTCTTTTATCTTTTAGGTCCCTTCTAGCGGCAGSCACAGAAAAW
ACGAGMGTTCTTCTCTTCGATCCCAATTCACGCAAATTAGTCAATACCAT
TGTAAACGCTCATGACGGCTGTGTTAACTGTGTCCGCTTTCTAGACTCGA
GATCCTTTGCTACTTGCTCTGATGACACAACTGTTGCCCTATGGGACGCT
CGCTACCTCAAAACTAAAGTCCGATCTTTAAAAGGACATGCCAACTGGGT
CAAAAACATTGAGTATTCCTTTAAGGAGAATTTGCTCGTCACCTCAGGGT
TTGATGGAGCCATCTTTACCTGGGATATCAATAAATATTCAGAGCGGGGG
GATGATTACTCTAAAATTTTATATCTCAATGCCCTCATGCGAATGAGGTT
AACTCCAAGTGGGGATCAAATGGTCATCTCCACAATGAACGGCTATATCC
TCATTATTCACGATTTATCTTTAAAAACTCTTAAAAAGGATTTGGAGGGT
TTCAAGGTAGCCCAACAGCTCTGACTCATTCTCTTATTCGACTAATATTA
TTTATTTCTATTAGCCCAACTTATATAGATTGCTACAAGTTTCGGGTCGT
CCCATTCCAGATGCTCTCAATTATACTCACTTATTTCATGCTGCTCGTAA
TCGTACGGAAATCATATCAGATTTTGCTCCTAATAATGATGCGGAAACCA
TAGCTAGTCTTCAAGTTCATCCCCAGGGTTGGGTTGTAGTCTCTCGTAAT
ATTTCTTCGGATAATCGTTCTGAAGTATGTGATAAATACAATCCAACACT
TTAATTATATATATATATTTATTTTTTTTCCTTTCAGTGGTGCTGTGTCC
ATGATCTTCATAGTTATCCTACAAACCCTTTAGAGGATGAAATGATATCA
TCTTCTTCGTCAGATCAACGTAGTCCTTCTTTTTCAAATGAGGCTCCCCA
ACCTTCCAATTCCGAAAATATTTTCTCTCGTCTATCCAACTTTATGTCGA
ATTCTTTATCATCTCCAGAGTCATTAGACCATATAATCCCCATTCGTTTT
CACAGAAGGAGAGGTGCTGGGGTTGGAGGAGGTGGAGGAGGAGACGGGGA
GGAAGTGGAGGATAATTCGAACGAAGAAACCGAAAGGAGACCCTCTGCTG
AGCTGGGATTTTCTTCTCTAAGAATGTCCGTCCAAAGAATGATAGAGGAT
TTTCAAAATCACACACAAAGGCAAAATAACGAATCTGATAATAATCAAGG
AAGCAGCAGGATTTTCTTGATATCCCCCGACAACAATCAAATATTTCTTA
TTGGCCCGTCTTCATTGTCATCTTCTTCTTCATCAAGTTCCAACACATCT
ATGCCAAAAAACCCACGTATTCATCGTAATATAAACCGTTTGACTCATTA
TATAGAAGAATCTAATACTGGTAGAGGACTTATTAAAGAAGTGAGCTTTA
GCTCAGATGGGCGAATCATTTGCTCACCCTTTGGTTTCGGTATAAGATTG
CTAGGATTTGATTCTAAATGTAGTGAGTTGAATCGTTGTCTCAGTACTGA
ACAAAGACAGCTTACAGAGCTTGGCACTGTTACCGGTCGACATGATGAAG
TTGTTCTTTCTACTGCATTTTCTCCTAATCAGTATCTCCTTGTGTCTGGT
TGCCTCTCTGGGAAAATCTCTTGGTATCAGCCAGTATTATAAAAAAAAGT
TATGAGTATTTGAAATATGAGATCCGAATTCAAAAACAAACGTAAAAATT
ATATGGTCTTAAATGTAACAATGATATATAAACAGCATGTGAGAGGAGCC
TATTAATCACTGGGAGAAAAGCTATTGGCTGAAGAAAATGAACATTACAT
ATTCCCCTGGGGCTTTCTTCTCGGATCCATTCCAAGATTTATTGAGATTC
AAAGTTATTTAATTCTTTGTTTTATTTCAATTATGTCTATTGATTAATTA
ATCATTAATACTTCATTGAAATCTATCGTCAATCAGTATCATTTTTATTA
ATACATAAAAGTCGTCGGTCATGTGCAGATATTTTCTACAGCATGCCGAT
TAATTTGTGAAATTCCGTGTCATTCATGGCCAAAGTCTTCTTCTTTTTCA
AGAGAGCTAGTTCAAGTGACGGGTAGAGAAAACTACATATTTTATGATTA
TGTGTAATATATGTTCCTCTAGAAGTGCCCAAATAATAATACATAATGTC
TGCATGTTACAAAAACTAAACTCTTCACGAAATTATCTCGGACTACTTGT
GTTCATTCTTCAATAGTAATAATGAATAATTAACAACAAGTTTATAAGAT
TTTTTTTTTTTTAGTGGCTTGATTTTGAATAAAAGTTTTATTAAATTATR
AATTAATTTTGTATCGTAGAATTATTTATTATGCGTGTACATATAATTTT
TTATATATGTTGAGTAAAAGAGTTCCAACACTTTTTCTTGTTGTCTCAGC
TACTCCCCGTGATGGTGTGACAGATTCACCAAATTTTAACACAACACCCC
TATATGTAAATTATAATATATGCTATTGTTGGAATCTATTACTGTAAGTG
CTATATCCCTCAATAGTTTTCCATCATCGAGTTGCATTTAAATGTAGCTT
GGCAAATGTTGC
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