EMLSAT00000005934, EMLSAT00000005934-701781 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005934
Unique NameEMLSAT00000005934-701781
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s320supercontigLSalAtl2s320:241691..242837 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005934 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005934EMLSAG00000005934-688700Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025889EMLSAE00000025889-734817Lepeophtheirus salmonisexon
EMLSAE00000025890EMLSAE00000025890-734818Lepeophtheirus salmonisexon
EMLSAE00000025891EMLSAE00000025891-734819Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775144auto775144Lepeophtheirus salmonispolypeptide
EMLSAP00000005934EMLSAP00000005934Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005934

>EMLSAP00000005934 ID=EMLSAP00000005934|Name=EMLSAP00000005934|organism=Lepeophtheirus salmonis|type=polypeptide|length=199bp
MSELGVILRKQQNKLIESLKKKSHFGTEQIESLLNLYRKCSDGTDKMDRN
QFREFLHHVFQMTDDIILDRIYKYFDMDNDGIIGREEWVLGTPQEHIRYC
FHIYDLNGDDCITKEEMLTMLKTSLGRQIIDEDPDEGVKDLIEMTLRKLD
VDKDGRVSFSDWQESVEADSLMLEAFGPCLPSRRSGEDFLHKLENNAFL
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mRNA from alignment at LSalAtl2s320:241691..242837+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005934-701781 ID=EMLSAT00000005934-701781|Name=EMLSAT00000005934|organism=Lepeophtheirus salmonis|type=mRNA|length=1147bp|location=Sequence derived from alignment at LSalAtl2s320:241691..242837+ (Lepeophtheirus salmonis)
ATGTCGGAACTTGGAGTTATTCTTAGAAAGCAACAAAATAAACTCATCGA
GTCTTTAAAGAAAAAGAGTCATTTTGGGACGGAGCAGATTGAGTCCCTTC
TGAATCTCTATAGAAAATGCTCTGATGGAACTGACAAAATGGATCGAAAT
CAATTTAGGGAATTCCTTCATCACGTTTTTCAAATGACGGATGACATTAT
TTTGGACCGGATTTATAAGTATTTTGATATGGATAATGATGGAATCATTG
GTCGAGAGGAATGGGTCCTCGGTCTGAGCGTGTTTTTAAAAGGCATTCCA
AGGATTTTACCTCATCATAAGAATATTTGAATTAATAGATATATATTGTA
CAATAGGGACACCTCAAGAGCACATTCGCTATTGTTTTCACATTTATGAC
TTGAATGGAGATGATTGCATTACAAAGGAGGAGATGCTAACAATGCTAAA
AACGAGTCTGGGTCGTCAAATCATAGATGAAGATCCTGATGAAGGAGTTA
AAGTAAGGATTTTGCAATCCTGTAATTTAAATAACAATCAAACTGAACGT
ATTTTTACAAAGTAATTTACAACACAATGAAGGGTGGCATAAGAAATTAT
AATTTTTCTATTGAGAGTGAGGGATTGCGAAAGTTTTGTTAGGAAGCTTC
TAGTTCAAGGGGACTTGAACCTCATTCGTCTTTAAATACACATCATATTT
AAAGATATACGAATATATAAAACAGAAACATTTTAATAAGGCTCCTTGAA
GGGATCCATTCCACTTCATTTATTTATCTCAATGAAAGTTATTTCGATTC
ATTTACTTCGCATGCATCTTTTAATACACATAATTATTATTTGGAGCGAT
TGAAACTCTGTTTTGTTCAATAATGATAAGTTTACTATGCTCCAAAGAAT
TCATTTGTGAGTCTTAGTCCTAGTAGTCACGACTCATTCATCTTATTTAT
GTTCTTTCATAAAGGATCTAATTGAAATGACACTCCGAAAATTGGACGTG
GATAAAGATGGAAGAGTTTCGTTTAGTGATTGGCAAGAAAGTGTAGAAGC
GGATTCGTTGATGCTTGAGGCATTTGGCCCATGTCTTCCAAGTCGACGAA
GTGGTGAGGACTTTCTGCATAAGCTAGAAAACAATGCTTTTCTTTAA
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