EMLSAT00000006133, EMLSAT00000006133-701980 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006133
Unique NameEMLSAT00000006133-701980
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s334supercontigLSalAtl2s334:379096..380445 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006133 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006133EMLSAG00000006133-688899Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026793EMLSAE00000026793-735721Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777072auto777072Lepeophtheirus salmonispolypeptide
EMLSAP00000006133EMLSAP00000006133Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006133

>EMLSAP00000006133 ID=EMLSAP00000006133|Name=EMLSAP00000006133|organism=Lepeophtheirus salmonis|type=polypeptide|length=449bp
MMSEAKLVSSGLIPSKPEATSSCSIPASSITGDSEDNKSSSTEGPDSPDQ
SSSASPIPPSMMIPSSPLHTSTDFQPLYSVRFTDHITKNGDIIKYRLNVR
RIKDLTIITIDREYGDFEYLHHALSTTSGNIEGICLPPLPLKPSTDPHSA
EARAKKQVGSGNRVLRGDDFARDCSLLEKYLYMALSHPLLGTNAFLKEFL
ENSEPPLRAKIKKGLFQSVLHNLDYRKCLAGPDLDETFQKERDWLQKYTT
NIKKTCETYHQLINCRLRLANQLSNLSHIASVSVGEKRNIGINGDINRLT
SKFSVCLIDDSTVIESLIASEDITLGVYLDLYSNYTDSVNDMMMKRTTLM
IEYDNASKALTKAKLSKXGAAKVAKDTLENRYSDCSHLAKTELKRFHQRR
ITEMKEAIVFYAEGQVKAAREASGGLKKAMERLKLEFHAVPVVEKEDQV
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mRNA from alignment at LSalAtl2s334:379096..380445-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006133-701980 ID=EMLSAT00000006133-701980|Name=EMLSAT00000006133|organism=Lepeophtheirus salmonis|type=mRNA|length=1350bp|location=Sequence derived from alignment at LSalAtl2s334:379096..380445- (Lepeophtheirus salmonis)
ATGATGTCGGAAGCGAAGTTAGTGTCTTCGGGACTAATACCTTCAAAACC
AGAAGCAACTTCATCTTGTAGTATTCCTGCATCTTCGATCACTGGGGATT
CTGAGGACAATAAATCCTCTTCGACGGAAGGACCCGATTCTCCTGATCAA
TCTTCAAGTGCTAGTCCTATACCACCATCTATGATGATCCCTTCATCTCC
CCTTCATACGTCAACTGACTTTCAACCACTCTACTCTGTTCGTTTTACAG
ATCATATAACAAAAAACGGAGACATAATAAAATATCGTCTAAATGTTCGA
CGGATAAAGGACTTGACCATAATCACCATTGATAGGGAATATGGCGACTT
TGAATATCTTCATCATGCCTTGTCAACTACGAGTGGGAATATAGAAGGGA
TTTGCCTTCCACCCTTACCCCTAAAACCATCTACTGATCCTCATTCCGCT
GAAGCGAGAGCTAAAAAACAAGTTGGGTCAGGAAATCGAGTTCTCCGAGG
AGATGACTTTGCCAGAGATTGTAGCCTATTGGAAAAATATTTGTATATGG
CATTGTCTCATCCTTTGTTAGGTACAAATGCATTTCTGAAAGAGTTTCTC
GAGAATTCGGAGCCTCCTCTTCGTGCTAAGATAAAAAAGGGATTATTCCA
AAGTGTCCTCCACAATTTAGACTATCGGAAATGTCTTGCAGGCCCTGATC
TTGATGAAACTTTTCAAAAGGAGAGGGATTGGCTCCAAAAATACACTACT
AATATTAAAAAAACATGTGAAACTTATCATCAACTCATAAATTGCCGATT
GAGATTAGCAAATCAATTATCTAATCTCTCCCATATCGCAAGTGTCAGTG
TTGGTGAAAAAAGAAACATTGGTATAAATGGAGATATAAATAGACTTACT
TCCAAATTTTCTGTTTGTCTAATAGATGACTCCACTGTCATTGAATCCTT
AATAGCTAGCGAAGACATCACTCTCGGTGTTTATTTGGACCTATACTCTA
ATTACACAGATTCAGTTAATGATATGATGATGAAAAGAACGACGCTAATG
ATTGAATACGATAATGCTTCCAAGGCGCTTACTAAAGCCAAACTATCAAA
GAYCGGAGCTGCCAAAGTAGCGAAAGATACATTGGAAAATCGCTACAGTG
ACTGCTCCCATTTGGCAAAAACCGAATTAAAAAGATTTCATCAAAGAAGA
ATAACAGAAATGAAGGAAGCAATTGTTTTTTATGCTGAAGGACAAGTTAA
GGCGGCTAGAGAGGCCTCCGGAGGKCTTAAAAAAGCCATGGAAAGATTAA
AATTGGAATTTCATGCCGTACCGGTAGTTGAGAAGGAGGATCAAGTCTAG
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