EMLSAT00000006164, EMLSAT00000006164-702011 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006164
Unique NameEMLSAT00000006164-702011
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s336supercontigLSalAtl2s336:580767..583352 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006164 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006164EMLSAG00000006164-688930Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026917EMLSAE00000026917-735845Lepeophtheirus salmonisexon
EMLSAE00000026918EMLSAE00000026918-735846Lepeophtheirus salmonisexon
EMLSAE00000026919EMLSAE00000026919-735847Lepeophtheirus salmonisexon
EMLSAE00000026920EMLSAE00000026920-735848Lepeophtheirus salmonisexon
EMLSAE00000026921EMLSAE00000026921-735849Lepeophtheirus salmonisexon
EMLSAE00000026922EMLSAE00000026922-735850Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778721auto778721Lepeophtheirus salmonispolypeptide
EMLSAP00000006164EMLSAP00000006164Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006164

>EMLSAP00000006164 ID=EMLSAP00000006164|Name=EMLSAP00000006164|organism=Lepeophtheirus salmonis|type=polypeptide|length=648bp
MERDLSLEIKIFWKDPKHISVAGLILLNVLDVLIYAGLNGGGIRFSRPLR
PLFFVNFPEGRQIRQAFRNIRRTLPEIFRVLVLLMLSIAIFTLMGYKLFC
QKNLVKANGSPYFMNYFDTLWDMYVLVTSANNPDVMMPAYDYSRWYAVFF
LTYIVLTLYIFMNVVLAVIYNNYKRNLRNEITDFYQRKCELLIEVFLLVS
VPDVQETPGPKNQNDGIFDAKNRFLNHDDFIRLLQITFPGESLKYYEALW
LILDTNGDRRIDFKEFMQLDDLIHIPYTDLNECLTFLERKLPGLYTSKIS
DFIKNIVRNMWFRYVFDLIIIVNAFFIAFDLDGAEWYFLVLFTLEIILKV
YTFGPKLFVKKLWNLFDLLVVGSALIVSVAQESLNEVQESVISLDVLLAL
RVLRLFKIFHSIQRFRTVLNTILYIVPSLSTYGGILMIFFYFYALIGMEI
FGDRVHSVGYNSSAEDFDPNCGNPLLDSSDFYRNHYCANNFNNVVSSFVL
LFELMVVNQWHVLTEGYVLVMQSKWTRLYFLSFNLICVTVILNIYTAFVL
EAFIMEYAALHISPSQSQEQDLPLAFSLSKKINEMGLAFGKKGVDDSGMV
SEDFDDYSLKTSIRFSLSTRPPRSGYKLLEKMFCQELKLQRQKLILSS
back to top

mRNA from alignment at LSalAtl2s336:580767..583352-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006164-702011 ID=EMLSAT00000006164-702011|Name=EMLSAT00000006164|organism=Lepeophtheirus salmonis|type=mRNA|length=2586bp|location=Sequence derived from alignment at LSalAtl2s336:580767..583352- (Lepeophtheirus salmonis)
ATGGAACGAGATCTCTCCTTAGAAATGTAAGTACATACATAACATAATAA
TGGATACGATCCCCCTTTTCCTGATTCTTTTATTTATTTATTTATACCAT
AAAAAAGAAAGAGAGAGAATGAAAAGCATAAACCACGGGCTCTCCAACAA
TTCTTTTGTTATTAACTTTTATTTTCTTACAACAACAAATAAAGAATAAG
AAGAAGAGAAAGGGAAGAAAAGAGACAACTGACTGACTGACTCCCTTGTC
CCTATTCCTCCTTYTTCTTATAGCYTTCCCCCCCCCCCCCTCCTCAATTC
GATTTCGACTCAATCGTCTATGATTCCTTCCTCTCTTTTTATTATTCTCA
TCATCTACTACATACACACCAACCATTATTGATTTAATTAATGACAGTAA
AATTTTTTGGAAGGATCCGAAGCACATAAGTGTCGCAGGACTCATCCTTT
TAAATGTCTTAGATGTTCTTATCTATGCAGGACTCAATGGAGGAGGGATT
CGATTTAGTCGTCCCCTTCGACCCCTTTTCTTTGTTAACTTTCCCGAGGG
AAGACAAATACGACAGGCCTTTCGAAACATACGAAGGACTCTGCCTGAAA
TATTCCGTGTACTTGTGCTACTCATGTTGAGCATAGCTATTTTTACACTC
ATGGGCTATAAGCTTTTTTGTCAGAAAAATTTAGGTAGGTTACACTTTTA
ACCTACACTAATTTTAACATTTCTTTTAATACTCTTTATATATAGTAAAG
GCCAATGGTAGCCCTTATTTTATGAATTACTTTGATACACTCTGGGACAT
GTATGTTCTTGTTACATCTGCAAACAATCCAGATGTCATGATGCCTGCTT
ATGACTACTCTCGGTGGTACGCTGTATTCTTCCTCACGTATATAGTTCTC
ACACTTTACATATTCATGAATGTTGTACTTGCTGTTATTTATAATAACTA
CAAAAGGAACCTTCGAAATGAAATTACAGATTTCTATCAGCGCAAGTGTG
AACTCCTCATTGAAGTCTTTCTGTTAGTTTCTGTCCCAGATGTTCAGGAA
ACACCAGGTCCTAAGAATCAAAACGATGGGATTTTCGATGCCAAAAATCG
ATTTCTAAATCATGACGACTTCATAAGGTTACTCCAAATTACCTTTCCGG
GAGAGTCCTTGAAGTAATCATGATTGATATTTTAAACTTGTACCATGTAA
TTAATCCATTATTCTACATACAATTACAGGTACTATGAGGCACTTTGGCT
TATATTAGATACAAATGGGGATCGTAGGATTGACTTTAAGGAATTTATGC
AGCTCGATGACTTGATCCACATTCCTTATACGGATCTGAATGAATGCCTC
ACTTTTCTAGAAAGGAAGCTTCCAGGCTTATACACGAGTAAAATCTCGGA
TTTTATTAAAAATATCGTTCGTAACATGTGGTTTCGCTACGTCTTTGACC
TCATCATCATTGTGAATGCATTTTTTATTGCATTTGATTTGGATGGAGCC
GAATGGTACTTCCTGGTTCTCTTTACTCTGGAAATAATTTTAAAAGTGTA
TACTTTTGGACCAAAGCTCTTTGTAAAGAAACTCTGGAACTTGTTTGACC
TTTTAGTGGTAGGRTCGGCTTTGATTGTATCTGTTGCTCAGGAATCACTG
AATGAGGTTCAAGAGTCTGTCATTAGTTTGGATGTACTTTTGGCCCTTCG
TGTTCTCAGGCTCTTTAAAATTTTTCACTCCATCCAAAGATTTAGAACCG
TTTTAAATACAATTTTGTATATTGTTCCAAGTTTATCCACATATGGTGGG
ATTTTAATGATATTCTTTTACTTTTATGCTCTGATTGGTAGGCCCCCTTA
TGTAATTTGTATTATTATCTAGACTGTACTACTAATGTGTGTTTTTATTT
TAAGGAATGGAAATATTTGGTGATCGAGTGCACTCTGTAGGGTACAATAG
TTCTGCAGAAGATTTTGATCCCAACTGTGGCAATCCACTTTTAGATAGTT
CTGACTTTTACAGGAATCACTACTGTGCAAATAATTTCAATAATGTTGTA
TCTTCCTTTGTTTTACTTTTTGAACTCATGGTTGTGAACCAATGGCACGT
CCTAACTGAGGGCTACGTACTCGTAATGCAGTCAAAATGGACACGTCTTT
ACTTTTTATCATTTAATTTAATATGTGTGACCGTCATCCTCAACATATAC
ACAGCCTTTGTTTTGGAAGCCTTTATCATGGAGTATGCAGCCCTTCATAT
TTCTCCCAGTCAATCACAAGAGCAAGACCTTCCCTTGGCCTTCTCCCTCT
CCAAAAAAATCAATGAAATGGGGCTTGCTTTTGGGAGTAATCCAAGTTCA
AAAGCAAAAAAGATGAAGATAACCTCATGGATGCGGATCATAATGACCTT
CAATTTATAGAGAAGGGAGTGGATGACTCTGGAATGGTGTCTGAGGACTT
TGATGACTATTCTCTTAAGACCTCCATTCGATTTAGTTTGAGTACTAGAC
CTCCTCGATCCGGTTATAAATTACTTGAGAAAATGTTTTGTCAGGAATTG
AAGCTTCAGCGACAAAAGTTGATTCTTTCTTCATGA
back to top
Add to Basket