EMLSAT00000006182, EMLSAT00000006182-702029 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006182
Unique NameEMLSAT00000006182-702029
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s337supercontigLSalAtl2s337:367632..368525 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006182 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006182EMLSAG00000006182-688948Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026987EMLSAE00000026987-735915Lepeophtheirus salmonisexon
EMLSAE00000026988EMLSAE00000026988-735916Lepeophtheirus salmonisexon
EMLSAE00000026989EMLSAE00000026989-735917Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776933auto776933Lepeophtheirus salmonispolypeptide
EMLSAP00000006182EMLSAP00000006182Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006182

>EMLSAP00000006182 ID=EMLSAP00000006182|Name=EMLSAP00000006182|organism=Lepeophtheirus salmonis|type=polypeptide|length=260bp
MPERYLEIKDEIESLEIRSDDLFLISYPKSGSTWSQEMVWQLKEGTNFED
DKQDLGERIPLLELECLYLREPNFPDKSVEAVKNKSSPRIIKSHLLTPFL
PKDLLNRAKVIYIMRNPKDVCVSFYHHEKMLICHEYTGSFEEYAELFLQG
KVVYGSYWEHLKFGLEIQKLDNVLLLCYEDMKKDIIKEMKKVLDFMKWDE
LSEEKLQILNEHLSFNKFQKNSAVNLDLYNGIKVKVNKNGHFIRKGIVGX
LEKLLFIRDE
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mRNA from alignment at LSalAtl2s337:367632..368525-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006182-702029 ID=EMLSAT00000006182-702029|Name=EMLSAT00000006182|organism=Lepeophtheirus salmonis|type=mRNA|length=894bp|location=Sequence derived from alignment at LSalAtl2s337:367632..368525- (Lepeophtheirus salmonis)
ATGCCTGAGAGATATCTAGAAATTAAGGATGAGATTGAAAGTTTAGAAAT
AAGGTCAGATGATTTGTTTCTAATCAGCTATCCAAAGAGTGGATCAACTT
GGAGTCAGGTAAGTTGTCTGAATTATTTATAATGAGTGAATATAAATCCA
GCAAATCTGTATTTAGGAAATGGTTTGGCAATTAAAAGAAGGGACTAATT
TTGAGGATGACAAACAGGATCTAGGTGAAAGAATTCCGTTGCTTGAATTA
GAGTGTCTCTACTTACGTGAGCCTAATTTCCCCGATAAAAGTGTAGAAGC
TGTTAAAAATAAATCCAGTCCCCGCATCATTAAATCCCATCTTCTGACAC
CATTCTTGCCCAAAGACCTTTTAAATAGAGCAAAAGTTATTTATATTATG
CGAAATCCTAAGGACGTTTGTGTTTCATTTTATCATCATGAAAAAATGCT
CATTTGTCATGAGTATACTGGTTCCTTTGAAGAATATGCAGAATTATTTC
TTCAAGGCAAGGTTGTCTATGGATCCTACTGGGAGCACTTGAAGGTATTT
ATTTTCTAGGGATGATACATATCTTAACATTGTCCATAAACATTTAGTTT
GGATTGGAAATACAAAAGTTGGATAATGTTCTCTTGCTATGTTATGAGGA
CATGAAAAAAGATATCATTAAGGAAATGAAAAAAGTACTGGATTTTATGA
AATGGGATGAGTTGAGTGAAGAGAAATTGCAAATACTCAATGAACACCTC
TCATTTAACAAATTTCAAAAGAATTCTGCTGTTAATCTAGATTTATATAA
TGGAATTAAGGTGAAAGTTAACAAAAATGGACATTTTATTCGTAAAGGAA
TAGTTGGAGANTTGGAAAAACTACTTTTCATCAGAGATGAGTGA
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