EMLSAT00000006202, EMLSAT00000006202-702049 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006202
Unique NameEMLSAT00000006202-702049
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s339supercontigLSalAtl2s339:366607..369039 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006202 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006202EMLSAG00000006202-688968Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027062EMLSAE00000027062-735990Lepeophtheirus salmonisexon
EMLSAE00000027063EMLSAE00000027063-735991Lepeophtheirus salmonisexon
EMLSAE00000027064EMLSAE00000027064-735992Lepeophtheirus salmonisexon
EMLSAE00000027065EMLSAE00000027065-735993Lepeophtheirus salmonisexon
EMLSAE00000027066EMLSAE00000027066-735994Lepeophtheirus salmonisexon
EMLSAE00000027067EMLSAE00000027067-735995Lepeophtheirus salmonisexon
EMLSAE00000027068EMLSAE00000027068-735996Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776918auto776918Lepeophtheirus salmonispolypeptide
EMLSAP00000006202EMLSAP00000006202Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006202

>EMLSAP00000006202 ID=EMLSAP00000006202|Name=EMLSAP00000006202|organism=Lepeophtheirus salmonis|type=polypeptide|length=471bp
MSDLVAEFCSITGAAPSVASSLLTVCNNSLEMAINMHMENGXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXGTENGNNVVGEDSEPLDQPGTSDQVRAPI
PQKVDTLIGPGFEGYAVAKGNPHKARIRSVFDGFRNFSNESTDDSKLPVS
RKKKRTLEELFKPPLDLTYRGNFQSARDHATNAKKWLLINIQDAGEFQCQ
LLNRDVWSNEAVRSILKEHFIFWQQYVECEDAQRYLTFYPVVNYPYVSVI
DPRTGEKLVEWNKFDSTTFCDLVTEFLSLRSSLESPKDSDLPPNKKFKSD
VSDFSVVDATEEDQIAMAIKASLEASKEKVKNMDSDSEVDVTYDDDSNSS
SFLSSVKDTSSKLSKSSIPSTPSVSKTNEPLRKWEEYLGKSDDPISSIMI
RFPDGARESKDFPSTSKLIAIILYIVSKGFPSETHEIVTNFPRRIITDLD
DEKTLSEHGLYPQETLFVQKR
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mRNA from alignment at LSalAtl2s339:366607..369039-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006202-702049 ID=EMLSAT00000006202-702049|Name=EMLSAT00000006202|organism=Lepeophtheirus salmonis|type=mRNA|length=2433bp|location=Sequence derived from alignment at LSalAtl2s339:366607..369039- (Lepeophtheirus salmonis)
ATGAGTGATTTAGTCGCGGAATTTTGCTCCATTACAGGTAAAGTCAACCG
AAAGGGTTGGGGTTTGAGGTAGAGGGAGCTTCATAATCCTTTGACATCAT
TAAATTATTAGCTAATTATATTTCTATGTCAATATAATTATATTAATGAA
TAATTATTCTWTTGCTATTCAACCTCTAGGAGCAGCGCCTTCCGTTGCAT
CCTCCTTACTCACAGTATGCAACAATTCCTTGGAAATGGCCATCAACATG
CACATGGAAAATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGAACAGAGAATGGAAATAATGTAGTAGGAGAAGATTCAGAGCCT
CTGGATCAACCTGGCACGTCTGATCAAGTCAGAGCTCCTATTCCACAAAA
AGTAGACACCCTAATTGGACCTGGCTTCGAGGGCTATGCTGTAGCCAAAG
GGAATCCACATAAGGCAAGGATCCGTTCCGTCTTTGATGGATTTAGAAAT
TTTAGTAATGAAAGTACTGGTGAGATTTCTCTCTTTTTTAACTGCTTTCA
TGGGTTTAATTGACTCTTTCCTATCCATTCTATCTAGATGATTCCAAATT
ACCTGTAAGTCGTAAGAAAAAAAGGACACTGGAAGAATTATTTAAACCTC
CCCTAGACTTAACTTATAGGGGTAACTTTCAATCCGCAAGAGATCATGCT
ACAAACGCAAAAAAGTGGCTCCTAATTAATATTCAAGATGCGGGCGAATT
TCAATGTCAATTATTAAATCGAGATGTATGGTCGAATGAGGCCGTGAGAT
CCATTCTTAAAGAACATTTTATATTTTGGCAGGTCTGGAATCATTTAAAG
TTATATATGTAAATATGTGGAAGAACTGACCTATTTAATCTCGTAAATTC
ATAATTTTAATTTAAAACATAGATGGGTAAGATGCATGTTATGGCACCAA
CTAGTCTTAAATGATTAGTCACCTGAAATGCAATGACATAATAAGTTCCT
GATTTAAATTTAAGTCAAATTGGTGCAATCGGACCATAATGTTTCAAAAT
CTAAAATTAAAAACGTGTGTAAATTGTATATTTTCAAAGCATAATCATTT
AAACCTTCGTATGTCATTTAAAAGGAATTTTTAAGTTGTATGTGGCTTGT
WGACTGTAGTTTTACCCCTTGCATGATTGAAATCAATAACTTGAAACACT
CGCTTGCTCATAATTTTAAGTTAGATTTGGATTTACAATTGAATTATCTC
GCTCTTTGATTCCTATCTTTTTAATGGCAATGTCAATAATTTTCAAAATC
GATGAATATCTTGTATTTTTCAGCAATACGTTGAATGTGAAGACGCTCAA
AGGTATTTAACTTTTTATCCTGTGGTTAACTATCCTTATGTATCTGTAAT
TGATCCACGAACTGGAGAAAAACTTGTTGAATGGAACAAATTCGATTCCA
CTACTTTCTGTGATTTAGTAACTGAATTCCTTTCTTTACGTTCATCTCTC
GAATCTCCCAAAGACTCTGACCTTCCTCCAAACAAAAAGTTTAAGTCTGA
TGTCTCTGTAAGTTTAGTTGATTTTTATGAGATTTTAGTGTTGAACTGTA
AGATGGGCAGAAGAGTTAGCAATATTTATTGGCCTAATAATTTATCTTGA
AATATATTTTGTTAACTTCATTTGTAGAAATATATATCAAATTTGTTAAT
ATACTTTAATTTTATTAACTAGGATTTCAGTGTGGTAGATGCAACTGAAG
AAGATCAGATTGCTATGGCCATAAAGGCATCTCTTGAGGCTTCAAAAGAA
AAGGTAAAAAACATGGATTCTGATTCTGAGGTTGATGTTACATATGACGA
CGACTCCAACTCATCGTCCTTCCTTAGTTCTGTTAAAGATACTTCTTCTA
AATTGAGCAAGTCTTCAATCCCATCTACGCCTAGTAATGCCTTTTTAATT
CATTTTGAAGTGAAAAACCTTTTGTTGATCTATTTTAACATCATCATTTT
ACTATTAATAGGTGTTTCAAAAACAAATGAACCTTTACGGAAATGGGAGG
AATATTTGGGTAAAAGTGATGATCCTATCTCCAGTATTATGATTAGATTC
CCCGACGGAGCAAGGGAATCTAAAGATTTTCCATCAACTAGCAAATTAAT
TGTGAGTAATTAATATATAATCATTATCTCCCTTTTTGTATAAAAATAAT
TACTTTTTTACATTTTGATTCTAGGCTATCATATTATATATCGTATCAAA
AGGTTTCCCTTCAGAGACCCATGAAATTGTGACAAATTTTCCTCGACGAA
TAATAACGGATCTTGATGATGAAAAAACTCTCAGTGAGCATGGCTTATAT
CCACAAGAGACCTTGTTTGTCCAAAAAAGATAG
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