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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s33 | supercontig | LSalAtl2s33:66072..71634 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006227 >EMLSAP00000006227 ID=EMLSAP00000006227|Name=EMLSAP00000006227|organism=Lepeophtheirus salmonis|type=polypeptide|length=1620bp
MSKQTTLLQTWGYSGNENVFEDGDDEDMESILVEALDQSTLRPSRDPPIA
DKKESIGFDLDAGRTWIYPINYPLRSYQLSISETCLFQNTLVSLPTGLGK
TFIAAVVMYNFYRWXPEGVIVFLAPTKPLVAQQIHACFNIMGIPAKDVAX
MTGNNPVNSRKKDWSSKRVFFLTPQVLSNDLSRGLLPTSSIKCVVIDEAH
RARGEYAYCQVIKELRMSGEYFRVIALSATPGNDIKSVQSVLMNLGISKI
ELRSEDSPDIVPYTFKRNIDKVVVPLSAEMEDIKDKYSALLEIFVGRLHR
FGVIGQNKKEIKVSSVSKFMLLQCRNEFRQNPPTKYVNDRGGQGKVEYNF
ASCISLFHAYELLHQHGLRPFYNFLLKTTDVHSGSKSLISELSKNQLWTD
IMGYLQNKFDGDSSNPILNSSRPNLSQKLSQRKDSKDFTSGHPKINKLLE
IVLKHFREKGDALSRVMIFSQYRDSVKEITASLHSHKPMVRAIEFIGQAG
TKVKKGLTQKEQIEVIKRFREGGYNTLVSTCVGEEGLDIGEVDLIICFDV
SKSPIQLIQRMGRTGRKRSGRIVVLVTKGKEEIAYNQCLYSKKSINRAIL
EKHQLANFFQKSPRMIPHDIHPKETSTTKKSRSKRVVSTHKDSNSINIDP
FETTEIIKPKENMNTENESQRPLQKLISSYSMYSSILDSVDSDENESEAI
EMKSLPPPSPSLNVSERVNSPFVANIPECEALSEVSSCKKNVSIVEVESG
SDHFETIKSEFDDLYSEESNLDIKRFQLELFNEEEEEGEDYSILEMAKFN
SDDILEEYEKIKNEFTQNNVSKMRPSLIQNENNFGIQTSTPRNKSSTILS
KNTLTSLYSSPPGSTKAQAPHFSVSPHNNKSKSGKVDENLGLFPNFDMEF
DHEDFFEEIDFDLSNKSTPRKDTSKSQKSLYSATQLTSFVSKNMAACSNT
SSPKSKNSPKIKSSLRKETLQKGFSMSQANFEIELNSDEDMFADSILYNE
EILNISKKEPPQNNNKSIDSPSNVRLNSSFALSQSSLNLSRSGGKKSRVS
FFDESEHFLPPSKKSLSYRDSSNLNSDNSGRDSDDSVVVVYDDSQKMQKS
MSDNKSVSSARHSSDRSSYLTQNSPIVSMKKRKKSAFESDSDGESDFIIS
KDKSHNQPGLKKRSSTKNKRNSFINKEVEVEDSDASPDEFGNESQFPDLD
CYDASFVDDATQNHQGTTDTFEMYLHSSKEQGGRTGIFKXPSKPLAPITA
DIYSQLPNQDSEDEYENDSFCVDDDDDLEYSDSKDNGDNTMALIVDSKSS
NVFKKSKKSRIRRPADDDSETSEEELKEDKVLVSPPLCTSLPKLKKGSDK
EERILVNSHVKDSKKSRILCPIDDPQSSEEDTVLVSSPLSKVFSNIKKDA
DKECILVNSSEFQSCHELISNLKYTFKRQVCVRSFEGAGFIISPRLAXDR
ISYSNFLSGAQRQKIIKRCQLMNDLYERSYIILELEEDVKAFNQRTKYAD
MILCQISQSNIRLLYSKNQKTSAELISNLLSKESNKGLSFKSLLLQKGSI
FNDEDFKIVSFFKSVPGIGVGTGYLLSSNYSTVSSFATSAVSTLMRKGHL
EKDKASQVQDFLRKTFNPSS back to topmRNA from alignment at LSalAtl2s33:66072..71634- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006227-702074 ID=EMLSAT00000006227-702074|Name=EMLSAT00000006227|organism=Lepeophtheirus salmonis|type=mRNA|length=5563bp|location=Sequence derived from alignment at LSalAtl2s33:66072..71634- (Lepeophtheirus salmonis)
ATGTCAAAACAGACAACCTTGTTACAAACTTGGGGTTATTCCGGAAATGA
GAACGTATTCGAAGATGGGGATGATGAAGATATGGAATCCATCTTGGTTG
AAGCCTTGGATCAATCCACCTTGAGACCATCGAGAGATCCCCCAATAGCG
GACAAGTAGAGTCCTAAATGAAGGGTTTCCCCTTTGAGTGTTCCTTATTG
TCTCATTCCGCCTTTCAGAAAGGAGTCCATCGGCTTTGATCTGGATGCAG
GCCGTACTTGGATTTATCCCATCAACTATCCGCTCCGAAGTTATCAACTC
TCCATTTCGGAAACCTGTTTATTTCAAAACACCCTTGTATCCCTCCCCAC
GGGTCTGGGGAAGACCTTCATCGCTGCCGTTGTCATGTACAACTTTTATC
GGTGGMATCCCGAAGGGGTTATCGTTTTTTTGGCGCCTACAAAGCCTCTC
GTTGCTCAACAAATCCATGCATGTTTTAACATCATGGGCATTCCGGCAAA
GGATGTGGCTGYGATGACTGGAAATAATCCTGTCAATTCCAGAAAAAAGG
ATTGGTCTTCCAAAAGAGTTTTCTTCCTCACTCCCCAAGTCCTTTCTAAT
GACTTATCCAGAGGATTACTCCCTACAAGTAGTATTAAATGTGTAGTCAT
TGATGAAGCTCACAGAGCACGAGGAGAATACGCCTATTGTCAAGTTATCA
AGGAGCTTAGAATGTCTGGAGAATATTTTAGAGTCATTGCTCTTTCCGCT
ACTCCAGGAAACGACATCAAATCCGTACAAAGCGTTCTTATGAACCTGGG
TATCTCTAAAATTGAGTTAAGAAGTGAAGACTCTCCTGATATTGTGCCCT
ATACTTTTAAGAGGAATATCGATAAAGTCGTTGTTCCTTTGAGTGCGGAG
ATGGAGGATATTAAAGACAAATACTCTGCTCTTTTGGAAATTTTTGTGGG
GAGGCTACATCGTTTTGGAGTTATTGGTCAAAACAAAAAAGAAATTAAAG
TGTCTAGCGTATCCAAGTTTATGTTGCTTCAGTGTCGTAATGAGTTTCGT
CAAAATCCTCCTACTAAATATGTCAATGATAGAGGAGGCCAAGGAAAAGT
AGAGTATAACTTTGCCTCATGTATATCTCTGTTTCATGCCTATGAACTCC
TCCATCAACACGGTCTACGCCCATTTTATAATTTTTTATTAAAAACGACT
GATGTTCACTCTGGTAGCAAGAGTCTTATATCGGAATTAAGTAAAAATCA
ACTTTGGACAGATATCATGGGTTATCTTCAAAATAAGTTTGACGGGGATT
CTTCCAATCCCATCCTTAATTCTAGTCGTCCTAATTTATCACAAAAATTA
TCGCAGAGGAAGGATTCCAAAGACTTTACTTCTGGACATCCCAAGATTAA
TAAACTTTTAGAAATTGTTTTAAAACATTTTAGAGAAAAAGGTGATGCAC
TCTCTAGAGTAATGATTTTTTCACAATACAGAGATAGCGTAAAAGAAATC
ACGGCGAGCTTACACAGTCATAAACCTATGGTTAGAGCAATTGAGTTCAT
CGGTCAAGCTGGCACTAAGGGTAATATATATATATATTTGATATCTATAA
GTCTTGTTACCCTCTTTAATTTCGCTTCAGTTAAAAAAGGATTGACTCAG
AAAGAACAAATTGAGGTGATTAAAAGATTCCGTGAGGGTGGTTATAATAC
TCTTGTTTCAACATGTGTGGGAGAGGAGGGCCTTGACATTGGAGAAGTGG
ATCTAATTATATGCTTTGACGTATCGAAGTCTCCAATACAGTTAATTCAA
CGAATGGGAAGAACTGGAAGGAAGCGAAGTGGAAGAATTGTTGTTCTTGT
GACAAAGGTAGGCAAACTTAAGACATTCAAGGTTACTTTTATTTGGATTT
TTTTTAAATTTGATAGGGTAAAGAAGAGATTGCGTATAATCAATGCCTTT
ATTCAAAAAAGTCGATAAACAGGGCAATCCTTGAAAAACACCAATTGGCT
AATTTTTTTCAAAAGTCACCCAGGATGATACCCCATGACATTCATCCCAA
GTGCCATAAAATGGAAATGGTCATTAGTACCTTAGAAAATCCCTCCTCTA
CTGCAAAAGAACCAAAAGCTAAGACAAGAAAATCAACACGGTAAATTTGA
TGCATACTTTTTTCAAATTTCGATTACGACTAGTGCGGAAAAGTTATCAT
GGTATAAGAAAATAACCTATGCAAAAATTCATTTCTCTACAATGTCATCT
TTAGATAGCACATCTCGATCGAAGTTTGAAACAAAGCAAAAAAAATATTT
ATTTAGTCAATAAGGATTAAAATAAAGTATTCTTCTTTATTTTGCATAAA
ACCATTTTGATAGACGTTTTTCTAACCATTAAAAAAATATTAATACAGTT
ATTTGCCATTCGCAGATCATCAAAATTTGCTTAAAATGGCTTTAGTAATA
TTTTTATAGGTTAGAAAAATGATTTTATGCAAAATGAAATATATTTTAAT
CAATTTAAAGTTAAAAACAAACCGCCCTAATGCATACATGACATATTTTG
ACCTTTATTTCTCTTCAGGGAAACCTCTACTACCAAAAAAAGTCGGAGTA
AAAGGGTTGTCAGTACTCACAAGGATTCCAACTCAATCAATATTGACCCA
TTTGAGACCACGGAGATAATAAAACCTAAGGAAAATATGAACACAGAAAA
TGAGAGTCAACGCCCTCTGCAAAAATTAATATCTTCATACTCAATGTACT
CTTCTATATTGGACTCTGTTGATAGTGATGAGAACGAATCTGAAGCCATT
GAAATGAAGTCTCTCCCTCCTCCGTCTCCTTCTCTTAATGTATCTGAACG
AGTTAATTCTCCCTTCGTTGCCAACATTCCAGAATGTGAGGCATTGAGTG
AAGTGAGTTCGTGTAAGAAGAATGTATCCATTGTTGAAGTTGAAAGTGGA
AGTGATCATTTCGAGACTATAAAGAGTGAATTCGATGATCTGTATTCAGA
GGAATCTAATTTGGATATAAAACGTTTTCAATTAGAGTTATTTAACGAGG
AGGAAGAAGAGGGAGAGGACTATTCTATTTTAGAAATGGCTAAATTCAAT
AGTGATGATATTTTGGAGGAGTACGAAAAGATAAAAAATGAATTTACTCA
GAATAATGTCTCCAAAATGCGACCATCTCTGATTCAAAATGAAAATAATT
TTGGGATTCAAACATCTACTCCTAGAAATAAATCGTCGACTATTCTGAGT
AAAAATACGTTAACATCATTGTATTCCTCTCCTCCGGGATCTACGAAAGC
TCAAGCTCCTCATTTTAGTGTATCTCCTCATAACAACAAAAGTAAATCCG
GGAAAGTGGATGAAAATCTTGGTTTATTCCCTAATTTTGATATGGAATTT
GACCATGAAGATTTTTTTGAAGAAATTGATTTTGATTTATCAAATAAAAG
TACTCCAAGGAAAGATACCAGTAAATCACAGAAAAGCTTATACTCTGCCA
CACAATTAACTTCTTTTGTGAGTAAAAACATGGCGGCGTGTTCTAATACA
TCATCACCCAAATCTAAAAACTCGCCAAAAATAAAGTCTTCCTTAAGGAA
AGAAACTTTACAAAAGGGGTTTTCGATGTCACAAGCAAATTTTGAAATTG
AACTGAATTCAGATGAAGACATGTTTGCGGACTCAATTTTATATAATGAA
GAAATTCTTAACATTTCCAAGAAAGAGCCTCCTCAAAATAACAATAAGTC
GATTGATAGTCCATCCAATGTACGACTAAATAGCTCTTTCGCATTGTCAC
AGAGTAGTCTAAATTTGAGTAGAAGTGGTGGTAAAAAGTCTAGAGTCTCT
TTTTTCGATGAATCTGAACATTTTCTTCCTCCTTCAAAAAAGTCTTTGTC
ATATAGAGACTCATCTAATTTAAATTCTGATAACTCTGGAAGGGATAGTG
ATGACTCGGTTGTTGTTGTGTATGATGATTCTCAGAAAATGCAAAAATCG
ATGAGTGATAATAAATCTGTATCATCTGCTCGACATAGTAGTGATAGATC
CTCCTACCTAACGCAAAACTCTCCCATAGTCTCTATGAAAAAGCGAAAAA
AATCAGCTTTTGAGAGTGATTCCGATGGAGAGTCCGATTTTATTATCTCA
AAAGATAAATCCCATAATCAACCAGGACTTAAAAAAAGAAGTTCTACCAA
GAACAAAAGAAATTCATTCATTAATAAAGAAGTAGAAGTTGAGGACAGTG
ATGCATCTCCTGATGAATTTGGAAATGAATCTCAGTTTCCCGATTTGGAC
TGTTATGACGCCAGTTTCGTTGATGATGCAACTCAAAATCATCAAGGTAC
TACTGATACATTTGAAATGTATCTCCATTCCTCAAAGGAGCAAGGAGGCC
GAACAGGAATMTTTAAAATSCCRTCCAAGCCATTGGCTCCCATAACTGCT
GATATTTATTCGCAGCTTCCTAATCAAGATAGTGAGGATGAATATGAAAA
TGACTCATTCTGCGTTGACGATGATGATGATTTAGAATATAGTGATAGCA
AGGATAATGGGGACAATACTATGGCGCTAATAGTAGATAGTAAGTCGTCA
AATGTTTTTAAAAAATCTAAAAAAAGTAGAATTCGTAGACCTGCTGATGA
CGACTCCGAAACATCTGAAGAAGAATTAAAGGAAGATAAAGTTTTAGTGA
GCCCCCCTCTTTGTACATCACTCCCGAAACTCAAGAAAGGTTCTGACAAA
GAAGAGCGCATTTTAGTGAATTCACATGTTAAAGACTCTAAAAAGAGTAG
AATACTTTGTCCTATTGATGATCCTCAATCATCTGAAGAAGATACAGTTT
TAGTCAGCTCCCCTCTATCTAAAGTATTCTCAAACATCAAGAAAGACGCT
GACAAAGAATGCATTTTAGTTAATTCATCCGAGTTTCAATCATGTCATGA
GCTAATATCCAATTTGAAATACACATTCAAACGGCAAGTATGCGTTCGCT
CCTTTGAAGGAGCTGGATTTATTATATCACCTCGATTGGCTGMAGATCGT
ATTTCATATTCAAACTTCCTGAGTGGAGCCCAAAGGCAAAAAATTATCAA
GAGATGCCAGCTAATGAATGATTTATATGAAAGGTCCTATATCATACTGG
AACTTGAGGAAGACGTCAAAGCATTTAATCAAAGGACAAAATATGCGGAT
ATGATACTCTGTCAGATATCCCAATCCAACATAAGACTTCTTTATAGTAA
AAATCAAAAAACATCTGCTGAGCTAATTTCCAACCTATTAAGTAAAGAGT
CTAATAAGGGACTCTCATTCAAATCCCTTCTCTTACAAAAAGGATCCATA
TTCAATGATGAAGACTTTAAAATTGTATCATTTTTTAAAAGTGTTCCCGG
AATAGGAGTTGGAACGGGCTACCTATTATCTTCAAATTATTCAACTGTTT
CTTCATTTGCAACAAGCGCTGTTTCAACTTTAATGCGGAAAGGGCATTTG
GAAAAAGACAAAGCTTCTCAAGTCCAAGATTTTCTACGTAAAACATTTAA
CCCCTCATCTTAA back to top
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