EMLSAT00000006239, EMLSAT00000006239-702086 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006239
Unique NameEMLSAT00000006239-702086
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3409supercontigLSalAtl2s3409:1295..2068 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006239 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006239EMLSAG00000006239-689005Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027225EMLSAE00000027225-736153Lepeophtheirus salmonisexon
EMLSAE00000027226EMLSAE00000027226-736154Lepeophtheirus salmonisexon
EMLSAE00000027227EMLSAE00000027227-736155Lepeophtheirus salmonisexon
EMLSAE00000027228EMLSAE00000027228-736156Lepeophtheirus salmonisexon
EMLSAE00000027229EMLSAE00000027229-736157Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768121auto768121Lepeophtheirus salmonispolypeptide
EMLSAP00000006239EMLSAP00000006239Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006239

>EMLSAP00000006239 ID=EMLSAP00000006239|Name=EMLSAP00000006239|organism=Lepeophtheirus salmonis|type=polypeptide|length=170bp
MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCP
ETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDS
SICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEK
NETVKRMCRKSCELCEIEQS
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mRNA from alignment at LSalAtl2s3409:1295..2068-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006239-702086 ID=EMLSAT00000006239-702086|Name=EMLSAT00000006239|organism=Lepeophtheirus salmonis|type=mRNA|length=774bp|location=Sequence derived from alignment at LSalAtl2s3409:1295..2068- (Lepeophtheirus salmonis)
ATGAAATCCAAATATTTAGTTTTAATTGCATGTTTTTTCCGAGGAATTAA
TGGAATAGTGTTAGGTAAATTTGTATTATTTTAAAAATTAAATCATCTGT
AACACATATACTTTTTTATAGAGATGGAGTGTTTGGATGATAGTAAAAGA
AGTTGTGAGGGGAAGGAAAATCAATGTTTTGAACCGTATCAACAATATAC
GTGTCCAGAAACTTGTGGGGTATGTAATAGTAAGCTTTGTTCATCAGTAA
AAATATAATAGATAAACTATCTGTGCATATGATATAACTAAATCATTTAC
TATTTCCCTGTATTTTATTTTATTAGCTACATGCAAGGATTATAACGGTA
TTTGCTTTAATGAAGACTCACAATGMACTATAAACAGTAATCTATTGTAT
GAATGCCCAAAAACTTGCGCAAAGTGTGATTGTAAATTTTGATTTACGTA
ATAAGAAAATTGTGGATAATAAAGTATGTATTTTTAGTATGCGAGGATTT
GATCGACTCATCAATTTGTGAAACAAGATTAAGTGAGTGTGCTCTGAAGA
AAATGAAATATGCTTGTAGAAAATCCTGTAAATATTGTAGTAAGTTAACA
ATCTATTTTTGTCGGTGAATATCATTTTATAAATTTTTAGAGGATGCATG
TAATGACGTTGGATCTCATGATTTTTGTGATGTACACGTAAGAAGAGGAG
ATTGTGAAAAAAATGAAACTGTAAAGCGCATGTGTAGAAAATCCTGCGAG
CTNTGTGAAATAGAACAATCTTAG
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