EMLSAT00000006273, EMLSAT00000006273-702120 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006273
Unique NameEMLSAT00000006273-702120
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s341supercontigLSalAtl2s341:673186..674124 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006273 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006273EMLSAG00000006273-689039Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027367EMLSAE00000027367-736295Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779265auto779265Lepeophtheirus salmonispolypeptide
EMLSAP00000006273EMLSAP00000006273Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006273

>EMLSAP00000006273 ID=EMLSAP00000006273|Name=EMLSAP00000006273|organism=Lepeophtheirus salmonis|type=polypeptide|length=312bp
MGKVKSEKRSSRTQSKSSEAAGGRQGLVFNTTLGQHILKNPAVVDSIVEK
SGLRSTDTVLEIGPGTGNLTAKLLEKVKRVIVCEVDPRMVAELQKRFQHS
SYKSKLDIIVGDAIKTDLPFFDVCVANVPYQISSPLVFKLLLHRPFFRVA
VLMFQREFAQRLIAPPGDKLYCRLSINTQLLSTVHHLLKVGKNNFRPPPK
VESSVVRIEPKNPPPPINFKEWDGLTRICFVRKNKTLGAAFSQTPVLLTL
DKNYRTHMSLKEEMLPEEFSIKELIVDVLESIDFTEKRPRTMDIDDFMKL
MHAFNSVGVHFV
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mRNA from alignment at LSalAtl2s341:673186..674124+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006273-702120 ID=EMLSAT00000006273-702120|Name=EMLSAT00000006273|organism=Lepeophtheirus salmonis|type=mRNA|length=939bp|location=Sequence derived from alignment at LSalAtl2s341:673186..674124+ (Lepeophtheirus salmonis)
ATGGGAAAGGTAAAGTCAGAAAAGAGGAGCAGTCGGACTCAATCAAAGTC
CTCAGAAGCTGCCGGAGGACGCCAAGGCCTTGTATTCAACACTACTCTCG
GTCAGCACATCCTTAAAAATCCAGCTGTGGTTGATTCAATAGTCGAAAAG
TCAGGCCTTCGATCCACAGACACCGTTTTGGAAATCGGTCCTGGAACTGG
TAATTTAACTGCCAAACTCTTGGAGAAAGTAAAACGAGTCATCGTCTGTG
AAGTGGATCCTCGGATGGTGGCAGAACTACAAAAGCGCTTTCAACATAGT
TCATATAAATCCAAATTGGATATCATTGTCGGAGACGCAATTAAAACGGA
TCTTCCCTTCTTTGACGTCTGTGTTGCCAATGTTCCATATCAAATCTCAA
GTCCCCTCGTCTTCAAACTCCTTCTTCACCGCCCATTCTTCCGTGTTGCC
GTTCTCATGTTCCAAAGGGAATTTGCACAAAGACTCATTGCTCCCCCCGG
TGATAAACTCTATTGCCGCCTCTCCATCAATACACAACTACTCTCCACGG
TGCATCACTTGCTCAAAGTGGGGAAAAATAACTTTAGACCTCCTCCTAAG
GTAGAGTCCTCAGTCGTACGCATTGAGCCCAAGAATCCCCCTCCTCCCAT
TAATTTCAAAGAATGGGATGGACTCACCCGTATTTGTTTCGTGAGGAAAA
ATAAAACTCTTGGTGCCGCATTCTCTCAAACTCCCGTCCTTCTGACTCTT
GACAAAAACTACAGGACGCATATGTCTCTAAAGGAAGAAATGTTGCCGGA
GGAGTTCTCCATTAAGGAATTGATAGTTGATGTACTCGAGAGTATTGACT
TTACGGAAAAAAGACCGCGAACAATGGATATTGATGATTTTATGAAGTTG
ATGCATGCCTTCAATTCCGTGGGTGTACACTTTGTTTGA
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