EMLSAT00000006306, EMLSAT00000006306-702153 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006306
Unique NameEMLSAT00000006306-702153
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s343supercontigLSalAtl2s343:294848..295975 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006306 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006306EMLSAG00000006306-689072Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027525EMLSAE00000027525-736453Lepeophtheirus salmonisexon
EMLSAE00000027526EMLSAE00000027526-736454Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775988auto775988Lepeophtheirus salmonispolypeptide
EMLSAP00000006306EMLSAP00000006306Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006306

>EMLSAP00000006306 ID=EMLSAP00000006306|Name=EMLSAP00000006306|organism=Lepeophtheirus salmonis|type=polypeptide|length=120bp
MPKDKSKRHASSSSSSSSSSDSDTAEPPPKRPAPAKKSAPPPPKPKGNPA
VDGKEPSWHLGNNKHVKVREFKGKTYVDIREYYVDKSTMDTKPGKKGISL
NTLQYQELKQIISQIDASLP
back to top

mRNA from alignment at LSalAtl2s343:294848..295975-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006306-702153 ID=EMLSAT00000006306-702153|Name=EMLSAT00000006306|organism=Lepeophtheirus salmonis|type=mRNA|length=1128bp|location=Sequence derived from alignment at LSalAtl2s343:294848..295975- (Lepeophtheirus salmonis)
CAAGGAAACAGAAGCTCCAGAATGCCCAAAGACAAGAGTAAGCGCCACGC
GTCTTCTAGCAGTAGTAGTAGCAGTTCCAGTGACTCAGATACTGCTGAGC
CACCTCCAAAGAGACCTGCACCAGCAAAGAAGAGTGCTCCTCCTCCTCCG
AAACCCAAAGGGAATCCTGCTGTTGATGGAAAAGAACCATCCTGGCATTT
AGGGAACAATAAACATGTCAAAGTAAGTGTTGATTCTTTTAAGTTCGAGG
GTTACATCCATAAGGGGGCATTACTTAGGGTGAGCGATAAGAGAAAGTAG
GGCTTACAATTTAGCCGTACGTCATATTTTCTCTTTCTATCTTGAAATGA
GTGATGCCCACAGCGGACAGGTGGAGATGAATCCTCGCAACCTCTTCTTG
GTCCCAAATTCACGCTACGACTCCTGCACAAAGTCCATGATATAGAAGAT
TGAAGCATGATACGCTACATGATGAGAAGTGATCTACTACAGTTGATGGA
TCGACTCCGAGTCTCTCTCCCTTCTACTCCATAAGGGACGAACTCAAAAC
ATCTTTCGAATATCCAATATATACGAGTCCAAATCCCTTTCCAACTCGCA
AAAGAATATAATTTAGATGTTATTTCCTAGTTATGAAGAGGTTGCGAGGA
TGGAATGGTAACTTTCTGCAATTTCGAGATAGAAAGCGGTAATAGGACGT
GCGGGTTAAATTTTAAACCATACTCGAAAGTATTAGATTTGATAACGCAT
TCATTATCGACTTTATGTCTTATTTAGAAAGTTTCCTTTCCACTTCATCC
CACTTTCCGAGCAATGCAGACTCTATTAACATAGGATTTCAAGAGTCATG
ACGTAACTCTACGTCCTTTTTAATTAGAAGAAATACTTCAAAATCAATTC
ATTTAATTAATTATGTACATGACTAATATTACCAATTATAATGAATCCGC
TTTCGATTATTTATAGGTGAGAGAATTCAAAGGGAAAACATATGTGGACA
TCAGAGAATACTATGTGGATAAAAGTACTATGGATACTAAACCTGGGAAA
AAAGGCATTTCCTTAAATACCCTTCAATATCAGGAGTTAAAGCAGATAAT
ATCCCAGATTGATGCAAGTCTTCCATAA
back to top
Add to Basket