EMLSAT00000006308, EMLSAT00000006308-702155 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006308
Unique NameEMLSAT00000006308-702155
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s343supercontigLSalAtl2s343:298721..299640 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006308 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006308EMLSAG00000006308-689074Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027530EMLSAE00000027530-736458Lepeophtheirus salmonisexon
EMLSAE00000027531EMLSAE00000027531-736459Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776043auto776043Lepeophtheirus salmonispolypeptide
EMLSAP00000006308EMLSAP00000006308Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006308

>EMLSAP00000006308 ID=EMLSAP00000006308|Name=EMLSAP00000006308|organism=Lepeophtheirus salmonis|type=polypeptide|length=154bp
MAKAVCVLKGEKVNGTIFFKQEKEGGEVHVTGKLEGLSEGLHGFHVHEFG
DNTNGCTSAGPHFNLDKCSHGGPTEGKGSRHTGDLGNVTAGNDGXANVDI
KDSFISLSGASGVLGRTVVIHADVDDLGKGGHELXSTTGNAGARSACGVI
GIAK
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mRNA from alignment at LSalAtl2s343:298721..299640+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006308-702155 ID=EMLSAT00000006308-702155|Name=EMLSAT00000006308|organism=Lepeophtheirus salmonis|type=mRNA|length=920bp|location=Sequence derived from alignment at LSalAtl2s343:298721..299640+ (Lepeophtheirus salmonis)
ATAAAATCACGTGACAATAGGAAGAAACCGGTCTGCTGTCAGCTTATGTT
ATAAGTAGCCTGCATTGAGTCGCAAGGGAGAAAATAAAATAATCTCTTTT
TAATTTTCCTTTTTTGTTTTGATGTAAGTTGTAACTCTGCTTCTAGCTAA
AAGTAGTTTTTCATTTTAAATAAAAGTGCTCTGATCCAAGATCCTGTCCG
TCCGTCGACATTCTTCCACAAATTTGTATTATAAGTCTTCTATTTTTGAA
AAGCAAGAATGGCTAAGGCAGTTTGTGTTCTCAAGGGTGAAAAGGTCAAT
GGAACTATTTTCTTTAAGCAAGAAAAGGTTTGTTATCCCGGATTATGATT
AATTGTATTGATATTTGAAGGATCTATTTGGACTCTCTTTTGGTTTTGTT
GTATTGATTTGATTTCCATATATTTTGTAGGAAGGGGGAGAAGTTCATGT
GACTGGAAAGTTGGAGGGTCTCTCCGAGGGACTCCACGGATTTCACGTCC
ATGAATTTGGTGATAATACCAATGGTTGTACCTCAGCCGGACCGCACTTT
AATTTGGACAAATGCAGCCATGGGGGCCCAACAGAGGGCAAAGGATCTCG
CCACACTGGGGATTTAGGGAATGTCACGGCAGGAAATGACGGAGKTGCAA
ATGTAGATATCAAGGACAGCTTTATTTCTCTCAGTGGAGCCAGTGGGGTT
CTTGGAAGAACTGTGGTCATCCATGCGGATGTGGATGATCTTGGCAAGGG
AGGCCATGAGTTGAGKAGTACCACTGGAAATGCTGGGGCGAGATCTGCCT
GTGGTGTCATTGGAATTGCCAAATAGATTTCTTAACATCCTCTTTTAATA
GTCTAATTATCGCATCTTTCAAGAGAAACGATTTCGAACTTATAATAAAA
TAATTGAAATAAAGGTGCAT
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