EMLSAT00000006329, EMLSAT00000006329-702176 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006329
Unique NameEMLSAT00000006329-702176
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s345supercontigLSalAtl2s345:401245..404386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006329 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006329EMLSAG00000006329-689095Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027611EMLSAE00000027611-736539Lepeophtheirus salmonisexon
EMLSAE00000027612EMLSAE00000027612-736540Lepeophtheirus salmonisexon
EMLSAE00000027613EMLSAE00000027613-736541Lepeophtheirus salmonisexon
EMLSAE00000027614EMLSAE00000027614-736542Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777317auto777317Lepeophtheirus salmonispolypeptide
EMLSAP00000006329EMLSAP00000006329Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006329

>EMLSAP00000006329 ID=EMLSAP00000006329|Name=EMLSAP00000006329|organism=Lepeophtheirus salmonis|type=polypeptide|length=669bp
MSAXRSPPRXRXRXXHNPVVMESCDNETTGTSTTIASRSSSNNKNNYVHP
SKNNFISNNNSICSDDDLFQEEEENEEEISCALIRKIPRRSAMLDTTERE
VVRIIGQHLTNIGLKTSADVLMREAGCTLDQPKAATFKKLVMNGNWSESV
KTLEDLKPHLENPGNLVEMKFLLLEQKYLEFLSNGNYIEALKVLQCEISP
LQRNRERTHELSSYLMLSSPEDLAGVTSTCRPSTRPELMDRLQAYLPASI
MLPPRRLTTLLAQAAEYQIDRCLYHNKVPAVERTNDSSRWKTDACYLPVD
HQCSKKEFPCETIQILSEHCDEVWYCRFSPDGLKLATGSKDNTVIIWDFD
PLTLKLKQNKTLTGHNRGVSYFAWSPDSTRLAVCGPEDSEEVNIWDVESG
KLDGKISNSSDDSLTAVSWSPDGTKITCGGNRGNFFHCDTKGQLIDSWEG
VRVQCLAFRGSGKAILAADTHHRIRSYSFDELVDHTILQEDHGIMTFSLD
ADDRHALLNIATQGIHMWDIEQKVLVRKFVGITQGFYTIHSCFGGVNQNF
IASGSEDNKVYIYHVKRSTPIAVLSGHTRTVTSVSWNPVYPEVLVSASDD
STVRVWGPCEKYRRKVSTCXTLNGELINXNNTTXTTSSSXXSSSSSSSXS
NGPEDSHSLDGDVSSNGLV
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mRNA from alignment at LSalAtl2s345:401245..404386-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006329-702176 ID=EMLSAT00000006329-702176|Name=EMLSAT00000006329|organism=Lepeophtheirus salmonis|type=mRNA|length=3142bp|location=Sequence derived from alignment at LSalAtl2s345:401245..404386- (Lepeophtheirus salmonis)
AAGCCTATGTCGGCGGSRAGATCCCCTCCSAGGYAGCGGGMCAGGYGCAG
MCATAATCCCGTAGTTATGGAGTCTTGCGACAATGAAACGACCGGTACGA
GTACGACTATCGCCTCCAGATCTTCTTCCAACAACAAGAATAACTATGTT
CATCCTTCTAAAAACAATTTCATATCCAACAATAATTCAATTTGTTCCGA
TGATGATCTGTTTCAAGAAGAGGAAGAGAATGAAGAAGAAATCTCGTGTG
CCCTCATAAGAAAAATTCCAAGAAGATCTGCTATGTTAGATACTACTGAG
CGAGAGGTCGTTAGAATAATAGGACAACATTTAACAAATATAGGCTTAAA
AACCTCGGCTGATGTTCTCATGAGAGAAGCTGGCTGTACTCTGGATCAAC
CCAAGGCTGCCACCTTTAAGAAACTCGTCATGAATGGCAATTGGTCTGAA
TCAGTGAAAAGTAATAAGGCATCTTATACAAAATATATACATGCATATGC
AAACGATCACATCATTTTTTCATTGGCACTGTCCCTTTGTAATAGGGGGA
TTTCTCATTCTGGTGATCTGATCCCTTCCTTTTTATGTTAACCATATCTT
CAAGATACGTATTTCTTTGCTCTTCTCATTTTGTATTCTTCTTTTTTTTT
AGCACTTGAAGATTTAAAACCTCACTTAGAAAACCCTGGAAATTTGGTCG
AAATGAAATTTTTGTTACTTGAGCAGAAGTATCTTGAGTTTTTATCAAAT
GGAAATTATATTGAGGCTTTAAAGGTTAGAAAGAATATATTTTTGGAAAT
CATTAAGTCATCTCTTAGTGCCAGGTTATATTAATACTTAAAATGTTTCT
CTTAAATTAAACCTTGATTAAGGACATAAATGCTAATTAATGTCACTAAA
TGGTCTATGACGAGTTCTATCTATAAAAAAAAATATGACCCGCTATCCGT
GTTTACAATTTATTAAATTCCATTATTTTTTTTTTTTTGCTCCTTTGATT
GTAAGAAATTGTAAATTAAATTTCATTGCATCAATATTTAAAGAAATGTG
GAAAATCATTAGAAATTAATCATTGATTATTATCAAATTTTATCTTCAGA
ACTCTTGTAGGGAGTGGCTGATTTTAATAGTGGAATGTAAATGTAAGAAA
CATAGTAATATTTTTTTACATAAGTTCATGAATCAATTAGATTAATTTAT
TTACTTCCAACATAATTTCAGAGCAAACATAATACCGCTTGTAGCTTTAA
TTTGATTTTTTATACTAACTTAGGTATTACAATGTGAGATATCTCCGCTT
CAAAGAAATCGAGAGCGAACTCATGAGCTATCAAGCTATTTGATGCTTTC
AAGCCCAGAAGACCTTGCTGGAGTTACTTCCACATGTCGCCCTTCAACCC
GTCCGGAACTTATGGATCGATTGCAAGCATATTTGCCGGCTTCAATCATG
CTCCCTCCCAGAAGACTGACAACACTACTCGCTCAAGCGGCAGAATATCA
AATTGATCGTTGCCTCTATCACAATAAAGTCCCTGCAGTTGAAAGGACCA
ACGATTCTTCCAGATGGAAAACAGATGCATGCTATTTGCCTGTGGATCAC
CAATGTTCAAAAAAAGAATTTCCTTGTGAAACAATTCAAATTTTATCAGA
ACACTGCGATGAAGTTTGGTACTGCCGATTTTCACCGGATGGCCTTAAGT
TAGCCACCGGATCTAAAGACAATACTGTTATTATCTGGGATTTTGATCCT
CTAACTCTTAAATTAAAACAAAACAAAACACTCACAGGGCATAATAGAGG
GGTCTCTTATTTTGCTTGGAGTCCTGATAGTACAAGATTGGCCGTTTGTG
GTCCTGAAGATTCTGAGGAGGTAAGCCATTATTGTTTTTTTAAATATTTA
CCCTCATATATTATATATTTTTCTTTCTTGTACCATATTTTTTACTGTTA
TTAGTTATCAACCTGTTCGATGTATGTGTGTCTAAATTCTAATATAATCA
TGAAATTGCGTTTTGAATATTTAAAGGATTTTTATTTATTAAATTTTAAT
CCATTTGGGTATGTTGAAAATAATATACCTTCCTGATGTTTTACCTACAT
CTATTTTAATATAAAATTAGACCAGAAAAATATATTTGAAAGTGAGAGAA
ATTATTATCCTGATGATTAATTTTAATAATAACATTCAAATTACATTTAG
GTTTGGTTTTTAGCAAGTGTTTTCATCAGTTATTTAAAGCTACACTCATA
CATTCTTCGAAAGTATTACTTTAAACTTATGTTATTTTTCCTTTTTATAT
TTTAGGTAAATATTTGGGATGTTGAATCTGGGAAGCTTGACGGTAAAATA
TCGAATTCTAGTGATGACTCTTTGACTGCTGTTTCATGGTCACCGGATGG
CACAAAAATAACATGCGGTGGTAACCGTGGAAATTTTTTCCATTGCGATA
CTAAAGGCCAGCTAATTGACTCATGGGAAGGAGTTCGGGTCCAGTGTTTA
GCGTTTAGAGGTTCGGGTAAAGCCATTTTGGCAGCTGATACCCATCATCG
TATACGCAGCTATAGTTTTGACGAACTGGTGGATCACACCATACTGCAAG
AAGATCACGGCATCATGACTTTCTCATTAGATGCTGATGATCGACATGCC
CTGCTTAATATAGCAACTCAAGGTATTCATATGTGGGATATCGAACAAAA
AGTACTAGTGAGAAAATTTGTGGGTATCACACAAGGATTTTATACAATAC
ATTCTTGTTTTGGAGGAGTCAATCAAAATTTCATAGCCTCTGGCTCGGAG
GACAACAAAGTATATATATATCACGTTAAACGCTCTACACCGATTGCCGT
ACTATCTGGACATACGCGGACGGTCACCTCAGTGAGTTGGAATCCAGTTT
ATCCTGAAGTACTCGTTTCTGCCTCAGACGATAGTACTGTTCGTGTTTGG
GGCCCTTGTGAAAAATATAGAAGAAAAGTAAGTACGTGTRCCACTCTGAA
TGGAGAGCTCATCAATNCCAACAACACCACAKCAACCACTTCCTCCTCGK
CGKCATCCTCATCATCATCTAGTTCTKCATCCAATGGCCCCGAAGATAGT
CATTCCCTGGACGGAGACGTATCATCCAACGGGCTGGTTTAA
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