EMLSAT00000006379, EMLSAT00000006379-702226 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006379
Unique NameEMLSAT00000006379-702226
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s34supercontigLSalAtl2s34:477902..478621 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006379 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006379EMLSAG00000006379-689145Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027856EMLSAE00000027856-736784Lepeophtheirus salmonisexon
EMLSAE00000027857EMLSAE00000027857-736785Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778019auto778019Lepeophtheirus salmonispolypeptide
EMLSAP00000006379EMLSAP00000006379Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006379

>EMLSAP00000006379 ID=EMLSAP00000006379|Name=EMLSAP00000006379|organism=Lepeophtheirus salmonis|type=polypeptide|length=85bp
MSRPIPLSRCQLGASSIGSLQLDIKLDKISKPGPPSVPGSAYFSLFRMAS
DSSRNVAILMIVREFSSMKISFFEVTDKSKMPFNE
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mRNA from alignment at LSalAtl2s34:477902..478621-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006379-702226 ID=EMLSAT00000006379-702226|Name=EMLSAT00000006379|organism=Lepeophtheirus salmonis|type=mRNA|length=720bp|location=Sequence derived from alignment at LSalAtl2s34:477902..478621- (Lepeophtheirus salmonis)
ATGTCCCGTCCCATACCACTTAGTCGATGCCAATTAGGAGCGTCCTCAAT
CGGGTCCTTGCGTATTTCTATTGATAAAGGAAGTTTTTGAAACTCCTTTT
CAAAACATTCGTCTTCTGTAATTTTTAAAGGCACATCGATAGGAATGTGA
ACTAAAGGGTCAGGATGAAATACTTTTTCAGTCGATTGATTATCTTCCAA
TAGTTTGATTTCTGGCAGAAACTTCTTTAAATCCAAAATATCTACCAATT
TTTCTTCGCTCTCTTCATTGATATTAAGATCTTTATTTGGTGTCTCTTGA
ACATTTATTGAAAGTGAAGAATTATTTGCTAACTCTAGTTGTAAGTTACT
GAGAGTATCGCCAATAGTACTATCATTTTTATCTATAATGCTATGAGAAG
AAACATCACTCACTAACATTTTTTCACTTGCTTCTTCACCAGTATCGACC
TCTCCCAAAAGAATTTCTCCGATTTCTCCGAGTGACATCAATTTAGGAAA
CTTATTAAGTATTTTTTTCCCAGAATTAGATATAAAATTAGATAAAATTT
CTAAGCCTGGACCACCTTCTGTACCTGGTAGCGCATATTTCTCTTTGTTT
AGAATGGCTTCAGATTCATCGAGGAATGTTGCTATTCTTATGATTGTTCG
AGAATTTTCTAGTATGAAAATTTCTTTTTTTGAAGTGACAGATAAATCTA
AAATGCCTTTCAATGAATGA
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