EMLSAT00000006426, EMLSAT00000006426-702273 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006426
Unique NameEMLSAT00000006426-702273
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s351supercontigLSalAtl2s351:269926..272947 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006426 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006426EMLSAG00000006426-689192Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028041EMLSAE00000028041-736969Lepeophtheirus salmonisexon
EMLSAE00000028042EMLSAE00000028042-736970Lepeophtheirus salmonisexon
EMLSAE00000028043EMLSAE00000028043-736971Lepeophtheirus salmonisexon
EMLSAE00000028044EMLSAE00000028044-736972Lepeophtheirus salmonisexon
EMLSAE00000028045EMLSAE00000028045-736973Lepeophtheirus salmonisexon
EMLSAE00000028046EMLSAE00000028046-736974Lepeophtheirus salmonisexon
EMLSAE00000028047EMLSAE00000028047-736975Lepeophtheirus salmonisexon
EMLSAE00000028048EMLSAE00000028048-736976Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775618auto775618Lepeophtheirus salmonispolypeptide
EMLSAP00000006426EMLSAP00000006426Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006426

>EMLSAP00000006426 ID=EMLSAP00000006426|Name=EMLSAP00000006426|organism=Lepeophtheirus salmonis|type=polypeptide|length=375bp
MSEGPRVRGMSRLHSKLKASLDEGNFYEAHQLYRIINFRLLSGKKYVECE
EILFEGANKLFEEQQMSSGVDLSKLYMQILQEGDIDPQERIFVRVSTLYK
SIPSESPDKNTFLSLAIQWSANEGYPNGHQRLHQLFAHSLWSIKRYPESR
HHFLYSSDGSGCGSMLAEFHFHQGFPREIDLFVVGTVLQFLCLRKHVTAA
FALLTYVEKHPGIKKGPPYAHPLLNFVWLLLIAIENKQSLSTFMILIEKY
KTSLERDPSYLEYLDKIGQTFFGVPAPKKKLPTDVFSGLFDSFFSAVNDS
TENEXPSXLEYLDKIGQTFFGVPAPKKKLPTDVFSGLFDSFFSAVNDSTE
NEGQSRDQPHNNTNLSRRMETEXLD
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mRNA from alignment at LSalAtl2s351:269926..272947+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006426-702273 ID=EMLSAT00000006426-702273|Name=EMLSAT00000006426|organism=Lepeophtheirus salmonis|type=mRNA|length=3022bp|location=Sequence derived from alignment at LSalAtl2s351:269926..272947+ (Lepeophtheirus salmonis)
AAGCTATTCTACGTAGGAAGCGGCGCGCAGATAAGCAGAAGGTAATAGAA
AATTACTATAAGTAAGCAGCTGCATTGATACTCCACTTTTAGGTTCTAAT
TCTAAAAAAAGTAGAAAAGTAAAAAAGACATTATTAAAGACTGAATAAAG
CCTTAAAGGAGGGATTTTGACTATTGCGGAATAGTGAGAGTGATTCTAAA
TCAGGATCTCCGGAATTCGAGGTGGTAAAGTGTGGAGAGAAGTTCCTTTG
GAAAATGAGTGAAGGGCCTCGTGTTCGAGGTATGAGCCGACTTCATAGTA
AGCTCAAAGCCTCTTTGGATGAAGGGAATTTCTATGAGGCGCACCAGTTG
TATCGGATCATTAATTTTAGGTGAGATCCGTTTCGTCCGGGGCTTGGAGC
ACTAATTATTTGTTATTTTAGGCTTTTGTCCGGCAAGAAATATGTGGAGT
GTGAGGAGATTCTGTTCGAGGGCGCCAATAAACTCTTTGAGGAGCAGCAA
ATGAGTTCCGGAGTGGATTTATCCAAATTATACATGCAGATCCTTCAGGA
AGGGGACATTGATCCCCAGGAAAGGATATTTGTCCGCGTATCCACGTATG
TGGTTCCTCACGTAGCTTAGTTGATCCTCTCTTTACTCCCCTTTCAGTTT
GTATAAAAGCATCCCTTCCGAGAGCCCAGACAAAAACACATTTCTAAGTT
TGGCTATTCAATGGTCTGCCAATGAAGGATACCCCAATGGGCATCAAAGG
CTTCACCAACTCTTTGCTCATTCTTTATGGAGTATCAAAAGGTAGTTATT
TCCTTCTCTCTCTCTCTCTCTCAACTCATTAACTCAATACACCTCTTTCG
ATCCCTCTCTTCCACACTTCCAGATATCCTGAGTCGCGTCACCATTTCTT
GTACTCCTCTGATGGAAGTGGTTGTGGTTCCATGCTTGCAGAATTCCATT
TTCATCAAGGCTTCCCCCGAGAAATTGATTTGTTTGTTGTTGGAACAGTT
TTGCAGTTTTTGTGCCTTCGTAAACATGTTACTGCTGCTTTTGCACTGCT
CACCTATGTCGAAAAACATCCAGGAATTAAAAAGTATGTAAAAAACAACA
ACACAAGGGTAGTCACATTTTCTAATTTGACTCATTACTTGTCATCCCTA
GGGGCCCTCCTTATGCACACCCACTCCTGAATTTTGTGTGGTTATTGCTC
ATTGCTATTGAGAACAAGCAGTCGCTTTCGACTTTTATGATTTTAATCGA
AAAATACAAGACATCMCTAGAGAGGTAATKTTTCAACTTATAACTTCAAW
AGTATARACGAAGCAACCTTATTTTTTTTTTTTTTAGGGATCCATCTTAT
TTGGAGTATCTTGATAAAATCGGTCAAACATTCTTCGGTGTGCCAGCTCC
CAAGAAGAAATTACCCACTGACGTATTTTCCGGTCTTTTTGATTCATTTT
TCAGTGCAGTAAATGACAGCACAGAAAATGAGNATCCATCTTWTTTGGAG
TATCTTGATAAAATCGGTCAAACATTCTTCGGTGTGCCAGCTCCCAAGAA
GAAATTACCCACTGACGTATTTTCCGGTCTTTTTGATTCATTTTTCAGTG
CAGTAAATGACAGCACAGAAAATGAGGGACAGTCGAGAGACCAGCCCCAC
AATAATACAAATCTATCACGACGAATGGAAACGGAGGMTTTAGATTGAAT
AAATTATAATTCAATTATCATTCTTCCTTTGCATAACAATTATGATTAAT
GTTAGATCGATATTTCAGCTAAATTTGTGTGAAAAATTTGCTGAATTTGG
GGGATTTGATGAAACTTTTTTTTTTCTCATAGAATCATCAATGAGTTCTT
AAGCCTCATTATTTTGATGAACTTCCTTCCTTTTCTTTTTCTATCAGTCA
TCAAATCAAATTTTAATTTATTTAATTAGTGATATATAATATATATAATA
CATTAATTCGTTAATCAAGAATGTATTTGCACATTTAGTTTGAATAAATT
CATAAATTTGTATTTGATTTTCAATCAATTAAATATTGTTTATAGCTTGA
GATATTTATGACGTTTAGATATAGCTGATGACTGATTAAGGTATTTTATA
CAGTATAATTTATACTCATTCAATAAGATTTTTGAATGATACGCACAAAC
TATGGCTATTATTAATGCATAAAGTATCAAAGGGATTACTCTGTCATTTT
GGATGAACAATGTGCTCTATCTAAATGACTATTTCTCCGATCAAATTAAA
AAAATCATCATTTGTAAATCATATTTGGTCATTGTAATCCATTAATTAAT
GATTATTATTAATAAAAACCAATATATAACAATCAATAATGGATTGAAAC
TATTAGCCACTTGTAACAAGTTACATGGTGAATTGAGGAATACTCCTTTT
TTTAGTGTTTAGTATTGACATACTTTTTTAGATGTAAATGATGTCCTTTA
TGTGAAGAAAATACATCTTCTAATAGTTTAAATATAGTTGACAATTATGT
TAGAATATGACTTCGTATTTGTTGTAAAAATGAAAGCAAAAAAGTTTTGT
ATTAAATCCCTACTAATATTTGATGAATTAATATATTTATAAGTATTTTT
AACTTATTTAAATAAGGTTAAAGCAATGACGACGGTTGTTAATAACAATA
CTCTGGGATGTGGGAATTATTATTGTTGTGTCTATATTTTTTTCAATCAG
ATGAGACATTCAAAAAACAGTTTTATCTCGTGATCGTCTTGCAAAAAGAA
CATAAATTGACAAATGCACTTTACCCTTATTATAGTTAACGGAGTTAATA
CTATTGAAAGTGAATCAAATTCATAACTCGAGTCCAAATTGTCTTTTTTT
TAATGACTTTATTTATTTTGNNATATATATATATATATATATATATAATT
AACTATTCTAGTTTAAAATTGATGCCCTAAACCAAAGTCAAACATCCTGA
ATAATTGCTATATATGATATTAGTTATCAATCCATTTTCAACATTAAGTT
TATTCTATAAAATTCGACAGTA
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