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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s356 | supercontig | LSalAtl2s356:656561..661573 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006506 >EMLSAP00000006506 ID=EMLSAP00000006506|Name=EMLSAP00000006506|organism=Lepeophtheirus salmonis|type=polypeptide|length=932bp
MMMTESSDWEEELKQYLETCSSELKDSSESTFIINGSELVDSCPTTVSRL
LLNPLDTLETCNGILSGVAERSNMKFRLSSMPPVLELIRNTVPRSRDVGY
YLSFLGTVVKTGSTKVMEWMREYQCKKCGHKEAFKAEFEMYQAFNTPKTC
NACNAGPNPWKMSSKLDDLVDSCKPGDDVLVIGTVCRRWKGLGKAPEERT
EIELVIRSNFIQVQNNEQAKFSLSHEIIDEFKKFWKRHEARHLIGRDDIL
SSFCPQVYGLFVVKLAVAVILAGGVXRNDDSGTRXRGEPHMLMVGDPGTG
KSQLLKYAARLSQRSVMTTGMGSTSAGLTVSAVKSGGAWNLEAGALVLAD
GGICCIDEFNGIRESDRTCIHEAMEQQSLSIAKAGLVCKLQTRCSVLAAA
NPKGSYNPEEPLSVNIAVASPLLSRFDIVMILLDMKNQKWDEMVSSYLLM
DQKPFDDSKKTNFWTMDTLRSYFVYIKSSIKPEMSTDISQIISRYYQRQR
GSEYVNKSRTSVRLLQSIVRLSQGHARLLHHTKVEIVDVVNAILLIEASG
GVPSSSQIIVNNSSNTIHSSFSANPMAXYYDQAKSVLLGLGFEDLWKEEE
EKLRKICEGQGFNYSCELDDESVDYNPTQDDRKDNNNMVLTQVMSKLKNK
FSFVETVMPKKKGSKKSDKSKKICRDSDSSSDEEQDPSQNVQLSSDDSDF
ESLNHAVSSTFQKTSNKKKKEDKRSRKSISSKIPESPNSNEEAEETYLKV
STDISKEKQGDNNIPRKINSSHSDLELSLNDDDKRTEEDGNKEVKMFNSL
RRGNSSNILQTNEEGKRCKSDSESINANPKKRSRYSSPKSDHETHDTSDI
SYSPPKMDHETQDTSNFTENQSQFTKNVSKCLSLSSMSTLNRFKKFSAPT
PTSSPECTQSSTVKTLADIFSQSQDDSLDLEL back to topmRNA from alignment at LSalAtl2s356:656561..661573+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006506-702353 ID=EMLSAT00000006506-702353|Name=EMLSAT00000006506|organism=Lepeophtheirus salmonis|type=mRNA|length=5013bp|location=Sequence derived from alignment at LSalAtl2s356:656561..661573+ (Lepeophtheirus salmonis)
AAACATTTAATAAAGATTGACTTGTGCCAGGATGATGATGACAGAGTCTT
CAGATTGGGAAGAAGAGTTGAAGCAATACTTGGAGACATGTAGTAGCGAA
CTAAAGGATTCCTCTGAATCCACTTTCATCATTAACGGATCTGAACTCGT
TGATTCGTGTCCCACAACCGTCTCCAGACTTCTCCTGAACCCATTGGATA
CTTTGGAGACTTGCAATGGAATTCTTTCTGGGGTGAATAAGATTAATATC
AGCAAATTATTAAATATGCTCATGTACTTTGTTCAGGTGGCGGAAAGATC
CAATATGAAGTTTCGACTCTCTTCGATGCCTCCTGTTTTGGAACTCATTC
GCAACACTGTCCCTCGATCCCGTGATGTCGGATACTATCTTTCCTTTTTA
GGAACAGTTGTTAAAACAGGGAGTACTAAAGTCATGGAATGGATGAGGGA
ATATCAATGTAAAAAGTGTGGGCACAAAGAAGCTTTTAAAGCAGAGTTCG
AAATGTATCAGGCTTTTAATACACCTAAAACATGTAACGCATGTAATGCT
GGGCCAAATCCATGGAAAATGAGCTCCAAATTAGGTCAACCCAGGCCTGA
ATACTGCAAAGACTATCAAGAAATTAAGGTGAATTTATTAGTCATGGGCT
GATATCAAAATATACCCATATCCCTGAAAGCATCTGTTTTGTTTCATCCA
AATTGGTTTGTTTCGTATGCCAATAGGTTCATATCCTTAAGATAAAATGT
GCTAACATCATTTAAGAACATATTGCTCATTCATCTAGTTTTAACCATAG
TTGGTTAATGTTTTATTTGATCAAAAAGGCTCACCTATATCATACAAATT
TATTTGACTTATTAAGTATGGATTCATCATTTTGTTACCACTTTAGTAAT
CTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTAAGTTCGAGTACTCGTT
GTTTTAAGCATTCCCTAGGTACAGAAATTGAACAAATATTTTGGTTCTAT
TCTCTTCTGTCTTCTGATTGTATCATATAAAATATTGCGTTAGCAAAAAT
CAAAATTTCTAAGAATTTTCTCTGAGACGATACGATGCAGATGTTGGATA
TTTTTGCCCGATATATCAGCCTACGTGTATAATTAATTTCGAATCCAATT
TTTCTACCTTCCCTATCTAGGTCCAAGAGCAAATTCAAAACCTTGGACTT
GGTACTATTCCTCGGAGTGTCTGGGTTGCTCTTGAAGGTAAATCTTTCGG
ATTCTAAAAGATCAATGTGTAACTATATTTGTTTATTTTGGTAGATGATT
TAGTGGATTCATGTAAGCCTGGAGACGATGTGCTTGTCATTGGTACGGTT
TGCCGTCGATGGAAAGGMCTCGGAAAGTAAGTTAGAGTTCTCAATAGGAT
TTTTGTCTTAATTTTATATTCAATAATATTAGGGCTCCCGAAGAACGAAC
TGAAATCGAATTAGTAATTCGCTCAAATTTCATACAAGTTCAAAACAATG
AACAAGCTAAATTTAGTTTATCTCACGAAATTATAGATGAGTTTAAGAAA
TTTTGGAAAAGGCATGAGGCTCGCCATTTAATAGGAAGGGACGATATTCT
TTCGTCATTTTGCCCTCAAGTACTATGCGCTTGAAATAATTTTGTTTATT
ATTCTGGAATAATCTCTATTGATTCATTCTAATAGGTTTATGGATTATTT
GTTGTTAAACTTGCAGTAGCAGTAATACTGGCTGGYGGMGTGGYAAGGAA
CGATGACAGCGGAACTCGGGNTAGAGGMGAACCTCATATGCTAATGGTTG
GAGATCCTGGAACTGGAAAGTCTCAACTTCTGAAATATGCTGCGCGACTT
TCTCAAAGGTAGGCGACAAATATCGAGTATTTGACATAGTGGGTTATTAT
TTTACTGTACTTGAATCATTATAATAGGTCAGTAATGACAACTGGAATGG
GTTCTACTAGTGCTGGTCTGACTGTTTCTGCAGTTAAGTCAGGCGGTGCT
TGGAATCTTGAGGCTGGMGCCTTAGTTCTCGCTGATGGAGGMATCTGTTG
CATTGATGAATTCAATGGAATCCGTGAATCTGATCGCACATGTATTCATG
AAGGTAACTATTTTTTGGTAATTATTTCTTTCGAAACTAGTAAGTTATTT
TATCAGCAATGGAGCAACAATCCCTCTCTATTGCAAAGGCAGGCTTAGTT
TGTAAATTACAGACTCGTTGTTCAGTTTTAGCTGCAGCTAATCCTAAAGG
AAGTTATAATCCAGAGGAGCCCTTATCAGTGAATATTGCTGTTGCAAGTC
CTCTTTTGTCTCGTTTTGATATAGTAATGATACTTTTGGATATGAAAAAT
CAGAAATGGGACGAAATGGTCTCGTCATATCTCCTGATGGATCAAAAACC
TTTCGACGACTCAAAAAAAACAAATTTTTGGACCATGGATACTCTTCGAT
CATATTTTGTATATATTAAATCATCTATTAAACCTGAGATGAGTACTGAT
ATAAGTCAAATCATAAGCCGATACTATCAGAGACAGAGAGGTAGTGAATA
TGTAAACAAGTCAAGAACTTCTGTGAGGCTACTTCAGAGTATTGTGCGTC
TCTCTCAAGGCCATGCAAGGCTTTTACATCATACCAAAGTTGAAATAGTG
GATGTTGTCAATGCAATACTGCTCATTGAGGCCTCAGGGGGAGTTCCTTC
TTCATCTCAAATCATCGTCAATAACTCTTCCAATACTATACATTCTTCTT
TTTCAGCCAATCCTATGGCTGYTTATTATGATCAAGCAAAAAGTGTTCTT
CTAGGATTAGGATTTGAGGATCTTTGGAAAGAAGAAGAGGAAAAACTTAG
AAAAATATGTGAGGGGCAAGGATTTAATTACTCTTGTGAACTTGATGATG
AATCAGTTGACTACAATCCTACTCAGGATGATCGAAAAGATAATAATAAT
ATGGTTCTTACTCAAGTTATGTCTAAGCTCAAGAATAAATTTTCATTCGT
AGAAACAGTGATGCCCAAGAAAAAAGGAAGCAAGAAGTCGGACAAGAGTA
AGAAAATTTGTAGGGATTCGGATTCATCGTCAGATGAAGAACAAGATCCG
TCTCAGAATGTTCAACTTTCCTCCGATGATTCAGACTTTGAATCGCTTAA
TCATGCAGTATCTTCAACATTTCAAAAAACTTCAAATAAGAAGAAAAAAG
AGGATAAGAGATCAAGGAAATCTATTTCTTCAAAAATACCTGAATCACCA
AATTCTAATGAAGAAGCGGAGGAAACCTATTTGAAAGTATCCACGGATAT
CTCTAAAGAAAAACAAGGAGACAATAATATACCAAGGAAAATAAATTCAT
CTCATTCGGATCTTGAACTGTCTCTCAACGATGATGATAAACGTACAGAA
GAGGATGGAAACAAGGAGGTTAAAATGTTTAATTCCCTGCGTCGCGGAAA
TTCTTCAAATATATTACAAACCAATGAAGAAGGAAAACGGTGTAAATCAG
ACTCGGAATCCATTAATGCTAACCCCAAAAAAAGAAGTCGTTATTCATCC
CCTAAAAGTGATCATGAAACTCACGATACCTCAGACATTAGCTATTCACC
CCCTAAAATGGATCATGAAACTCAGGATACATCTAACTTTACTGAGAATC
AAAGTCAGTTCACAAAAAATGTGTCGAAATGTCTATCATTGTCATCAATG
AGCACCCTAAATCGGTTCAAGAAATTTAGTGCTCCAACTCCTACAAGCAG
TCCTGAATGTACACAATCCAGTACGGTTAAAACCTTAGCTGATATATTTT
CTCAATCTCAAGATGATAGCTTGGATTTGGAACTTTAATTGACTTTCTCT
CAAAAATTTAATTTATATTTATTAGTTATATAAGTTATTTATAACTATAC
GTATAATATGTGATCTGTGATATGATATTTTGGATGGACTGCTAGTTATC
TAGTACTGCTCTCTTCTTTAGTAGTCCCTGTATAATGTAATAGAGTAAAG
GTTCCGTGAGTTTGTTGATTGTCAAACTATTTGTTTACTTTTTACGCTCA
AATTTCTTTAAGATAATATTCAAGTGGTAATTTTTTAAGACTAAATATGA
AGGAGAATCTTACAAATAACAATTATGGGAATTCCTCAGCCGAAGAATCA
GAAGATGATTTCGAAGATGAAGAATCCGATTATGATGATGAAGAGGAGGA
AGAGGAAGAATTGGATCCCTACAGGAAGAAATATCGTCTACTCAGTGAAC
GAATGACTGCTATAAAAGAAGACAATGATCGCCTTGCCTCGAAAATTGGT
GAAGTAGGGCGATGGATCCGTCGTGGAATTGCTGAAAAAGAGTTCTTAGT
ACGTCGCCTTGACTCTCACAATGATAATTTCCGTAACGTTCCTCTCATTA
TTCCGTTCCCTGGTGAAAAGGGACAAGAAACCTTGGAAAGGAAGTCGAGG
GGACGAAGGAGAAAAAAACCATTACGAAAGAAAATCAAAGCGGATCCGAA
TTGTCCTAAAAGACCTCAAAACCCTTTTTTTCAATTCTGTCAAGAAAATC
GGGGGAAAGTGTCCAAAGAATATTTAGAACTTCATAGGGTAACATTATCA
AAAAAGGAATTGACCAAAATACTGGGTTCTAAARGGAACGAAATGACTGC
AACTGAGAAAAAAGTATACACCCCCATCTATTAAATAAAATTCCCTATCC
TCATGTGATAATACATTTCCACAATTTTATTAGGTATATTATGATTTGTA
CGAACGCGACAAAGCTCATTATGGTGAGAAGCTTCAACGATACAAAGATG
AAAGTAATTGGAAAGTCAAGGAAAGTCCTGATGGTAAACAAAGCGCGGAG
TTAATTTGAGTGACAACTACTTCATCCTTAGGCTAAATTTTATTTATTAT
AATTATATTATTG back to top
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