EMLSAT00000006525, EMLSAT00000006525-702372 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006525
Unique NameEMLSAT00000006525-702372
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s357supercontigLSalAtl2s357:395548..396760 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006525 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006525EMLSAG00000006525-689291Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028519EMLSAE00000028519-737447Lepeophtheirus salmonisexon
EMLSAE00000028520EMLSAE00000028520-737448Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777244auto777244Lepeophtheirus salmonispolypeptide
EMLSAP00000006525EMLSAP00000006525Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006525

>EMLSAP00000006525 ID=EMLSAP00000006525|Name=EMLSAP00000006525|organism=Lepeophtheirus salmonis|type=polypeptide|length=330bp
APSFISIQTTTNPWKLLTSPITCCRRRFWNYHWIGKMPKAEXKLDGNAAR
LIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGDEDLSDT
IEKIIRFASSLVVSGSIIEGRFLREEINEFAETLIERAIDFSRLVFQKPY
PSESIQKLGIVWDLYDVSFSSNNLEACIKILSREKDLIKDALDELLENDE
GDTETEELARSKGSGLVKSVWVLNKKLIESIGHASTDIDDITSATLKLSE
YVDDYVFSLYSASEEPDSVRESAETLNESANNILDKIHQNPERSSDFGSW
GVFLKKAFSHNYTQIQNVINEIDMNKKLKL
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mRNA from alignment at LSalAtl2s357:395548..396760+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006525-702372 ID=EMLSAT00000006525-702372|Name=EMLSAT00000006525|organism=Lepeophtheirus salmonis|type=mRNA|length=1213bp|location=Sequence derived from alignment at LSalAtl2s357:395548..396760+ (Lepeophtheirus salmonis)
GCGCCCTCTTTCATTTCTATCCAAACAACAACCAATCCGTGGAAATTATT
GACGTCCCCGATCACATGCTGTAGACGTAGATTTTGGAATTATCATTGGA
TTGGCAAAATGCCGAAGGCAGAGGMGAAGTTGGATGGAAATGCTGCTAGA
TTAATAGCTCATCTTAATGTCATTAAAGCATCAATTAAGGAAGAAGGGAA
TGAGGCTATTGGCGCATCTCAGAACTACGATGTCCTAGTTCATAATCTTA
ATGTTTTAGCGTTGAGACTATCTAATGGAGATGAGGATTTGAGTGATACG
ATTGAGAAAATAATAAGATTTGCCTCTTCTCTCGTAGTATCGGGATCAAT
CATTGAGGGTCGTTTTCTACGAGAGGAAATCAATGAATTCGCTGAGACCC
TTATTGGTTTGTGACTTATTTTGTACGATCATTACTAGTTAACTATGATA
GCTTATTTCTTCATTATTTTCCTTAAACAGAAAGAGCAATTGACTTCTCT
CGGTTAGTCTTCCAAAAACCCTACCCGTCAGAATCCATTCAAAAACTTGG
TATAGTGTGGGACCTCTATGATGTCTCATTTTCCTCTAATAATCTGGAAG
CTTGCATTAAAATTCTATCGCGTGAAAAGGATCTAATAAAAGATGCATTG
GATGAGTTATTAGAAAATGATGAAGGAGATACTGAAACCGAGGAACTTGC
ACGATCCAAAGGTAGTGGTCTTGTTAAAAGTGTTTGGGTCTTGAATAAAA
AACTAATTGAGTCTATTGGACACGCCTCCACGGATATTGATGACATTACG
TCAGCTACATTAAAATTAAGTGAATATGTGGATGACTATGTGTTTTCCTT
GTATTCTGCATCAGAAGAACCAGACTCCGTAAGGGAATCAGCAGAAACTC
TTAATGAATCTGCCAATAATATACTTGACAAGATTCATCAAAACCCTGAG
CGCTCTAGTGATTTTGGGTCTTGGGGTGTATTTTTAAAGAAGGCTTTTTC
TCATAATTATACGCAGATTCAAAATGTTATCAATGAAATTGATATGAATA
AAAAGTTAAAGTTATAATATATCTAGAATTGTTATGTTTTTTTTTTAAAT
TCCTTGCTGTAATTGGCCAACCAATTAACAAATGTCACTTCTTTAAACTA
AATATAAAATGTACGCCTGAAATATTCATACTTATTGTAATAAAATACAT
AATATATATAAAC
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