EMLSAT00000006600, EMLSAT00000006600-702447 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006600
Unique NameEMLSAT00000006600-702447
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s363supercontigLSalAtl2s363:469811..470715 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006600 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006600EMLSAG00000006600-689366Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028927EMLSAE00000028927-737855Lepeophtheirus salmonisexon
EMLSAE00000028928EMLSAE00000028928-737856Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777962auto777962Lepeophtheirus salmonispolypeptide
EMLSAP00000006600EMLSAP00000006600Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006600

>EMLSAP00000006600 ID=EMLSAP00000006600|Name=EMLSAP00000006600|organism=Lepeophtheirus salmonis|type=polypeptide|length=265bp
METKSFYGKSRLRFLATARDLIEENAGHDLHRVVLPPELADQGNDSDEEW
YDDILDNDYMPDEIAREVEIHREDSEEENNAEHGDDDVTNTISKRWRKNE
KHFLGELDAILKSDVISKHAEESMHDIFSLFFTDDMILLIVEQTHLYGQR
DKNVTTFSVDASEMRKFLGLLIISCYYCLPSEKDYWTTADDMEAPIFSKV
MSRDRFRIIKXLHISENENLAHSKVAKIIPLFEMLRNNSQQFGVFNEQLS
IDESMVPYRGLHSAK
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mRNA from alignment at LSalAtl2s363:469811..470715-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006600-702447 ID=EMLSAT00000006600-702447|Name=EMLSAT00000006600|organism=Lepeophtheirus salmonis|type=mRNA|length=905bp|location=Sequence derived from alignment at LSalAtl2s363:469811..470715- (Lepeophtheirus salmonis)
ATGGAGACCAAATCTTTTTATGGAAAATCGAGATTACGATTTTTAGCAAC
AGCAAGAGATTTAATAGAAGAGAATGCAGGTCATGATTTGCATAGAGTTG
TGCTTCCTCCTGAGCTAGCGGACCAAGGTAAGGGTATTTTTTACATAAAT
ACTTTGAAATTGTTATCTTATCTTATAATTACATTTGAGACCAAAATTAC
CACAGTAAATAGTAATGTGTATACTAACATTCAGGTAACGACAGTGATGA
AGAGTGGTATGATGATATTCTAGATAACGATTACATGCCTGATGAAATTG
CTCGTGAGGTTGAGATACATAGAGAAGATTCAGAAGAGGAAAATAATGCA
GAACATGGAGATGATGATGTTACAAATACAATTAGTAAAAGATGGAGAAA
AAATGAAAAACATTTTTTAGGTGAACTTGACGCAATTCTAAAAAGTGATG
TTATCAGTAAACATGCAGAAGAAAGTATGCATGACATATTTTCATTATTT
TTCACAGATGATATGATATTACTAATTGTGGAACAAACACATCTTTATGG
ACAAAGAGACAAGAATGTAACGACATTCTCAGTAGATGCTAGCGAAATGA
GAAAGTTCTTAGGTTTATTGATTATTAGCTGCTATTACTGTCTTCCGTCA
GAAAAAGACTATTGGACCACTGCAGATGACATGGAAGCACCTATTTTCTC
GAAAGTAATGAGCAGAGATCGTTTCCGTATTATAAAAAANCTACATATTT
CTGAAAATGAGAATCTGGCCCATTCGAAAGTAGCAAAAATTATCCCTCTA
TTTGAAATGTTAAGAAATAATTCTCAGCAATTTGGAGTATTTAATGAACA
ATTGAGCATTGATGAATCTATGGTTCCGTACCGCGGTCTTCACAGTGCAA
AGTAA
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