EMLSAT00000006620, EMLSAT00000006620-702467 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006620
Unique NameEMLSAT00000006620-702467
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s364supercontigLSalAtl2s364:511929..513356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006620 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006620EMLSAG00000006620-689386Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028997EMLSAE00000028997-737925Lepeophtheirus salmonisexon
EMLSAE00000028998EMLSAE00000028998-737926Lepeophtheirus salmonisexon
EMLSAE00000028999EMLSAE00000028999-737927Lepeophtheirus salmonisexon
EMLSAE00000029000EMLSAE00000029000-737928Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778290auto778290Lepeophtheirus salmonispolypeptide
EMLSAP00000006620EMLSAP00000006620Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006620

>EMLSAP00000006620 ID=EMLSAP00000006620|Name=EMLSAP00000006620|organism=Lepeophtheirus salmonis|type=polypeptide|length=403bp
MAXRETXEKXNXKWTKNDTQVEFEQKKIYHFIENLSAGSDTDQVIIPNIP
MIAAMAKLKNSSSLIKIALLSILQVFNQKPFVKLSVKKILWGYHNPLIKL
GNDILPRDERFPFDKFGILIGKNGSTSGKFKIHSGVDNLSNLGEIMSFRG
KDKLDVWSGDQCNAIRGTDGTIFPPGFAKNKTLYVFSPDLCQSLPLVFEK
EIITNDIPGYRYIPPSNVFSGPAKNPRNKCFCDXKNKCMAQDGLMNISPC
QYNSPIIISWPHFYQANPNLLNEVEGLNPDPEKHQFYIDIQPKLGSGXRA
AXRSQINIAVTPMEGVGDSSKLRKGVFPLIWVDEGLDEIKNEEVLNLLNM
AVNLPTGIKKFGAPTTIFIGVLLIIISLLMLFHRRHNNRVAQFPSVNKST
DSL
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mRNA from alignment at LSalAtl2s364:511929..513356-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006620-702467 ID=EMLSAT00000006620-702467|Name=EMLSAT00000006620|organism=Lepeophtheirus salmonis|type=mRNA|length=1428bp|location=Sequence derived from alignment at LSalAtl2s364:511929..513356- (Lepeophtheirus salmonis)
ATGGCTTKCAGAGAAACAWGGGAGAAAGWGAATAMTAAATGGACCAAAAA
TGATACTCAAGTAGAATTTGAACAAAAGAAGATTTATCATTTTATAGAAA
ATTTATCTGCTGGCTCAGATACAGATCAAGTTATAATTCCAAACATACCC
ATGATTGCTGCCATGGCAAAATTGAAAAATTCTTCATCCCTCATTAAAAT
AGCACTATTATCCATTCTTCAAGTATTTAACCAAAAACCTTTTGTAAAAC
TCTCAGTCAAAAAAATACTTTGGGGGTATCACAATCCTCTGATCAAGCTA
GGTAACGATATTTTACCTAGGGATGAAAGATTTCCTTTTGATAAATTTGG
AATCCTCATCGGAGTAAGTTTAATTGACTTCATTTTATATTACAATTATA
ATTAACAAATATGATCTTATTTTTACAGAAAAACGGGTCCACATCAGGAA
AATTTAAAATCCACTCTGGAGTAGATAATCTTTCGAACCTCGGGGAAATT
ATGAGCTTTCGAGGGAAAGATAAGCTTGATGTTTGGAGTGGGGATCAATG
TAATGCTATAAGAGGTACCGATGGCACAATATTTCCACCAGGTTTTGCGA
AAAACAAAACCCTCTATGTATTTAGTCCAGATTTATGTCAATCCCTTCCA
CTTGTATTTGAAAAAGAGATAATAACCAATGACATTCCTGGATATAGGTA
TGTTTACATATCATAATTAAATAATACATGGCATCAATTAATTATAAACA
AATTTATGTTATTTTTAATCTTAGATACATCCCACCTTCTAATGTATTCT
CTGGTCCGGCAAAAAACCCTCGTAACAAATGTTTTTGTGACRAAAAGAAT
AAATGTATGGCACAGGATGGATTAATGAATATATCCCCCTGCCAATACAA
TTCTCCAATAATAATATCATGGCCCCACTTTTATCAGGCAAATCCAAATC
TATTAAACGAAGTGGAGGGTCTCAATCCGGATCCCGAAAAACATCAGTTC
TACATAGACATTCAACCGGTAAGGGTCATTGAAGGGGAAAAAAACTTTTA
CAATATTGCTAGATATAAATTAACGAATATTATACCTTTCAGAAACTCGG
AAGTGGCTTKCGCGCCGCCGKCAGAAGTCAAATAAATATTGCAGTCACTC
CAATGGAAGGTGTGGGAGACTCCTCTAAACTACGAAAAGGTGTATTTCCT
CTAATTTGGGTCGACGAGGGACTGGACGAAATCAAAAATGAAGAGGTTCT
CAACCTCTTAAACATGGCTGTGAATTTACCGACCGGAATTAAAAAATTCG
GGGCGCCTACAACCATCTTCATTGGAGTACTTTTGATCATAATTTCCTTA
CTCATGCTCTTTCATAGAAGACATAATAATCGTGTCGCACAATTTCCCTC
CGTAAATAAAAGCACAGATAGTTTATAA
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