EMLSAT00000006629, EMLSAT00000006629-702476 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006629
Unique NameEMLSAT00000006629-702476
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s364supercontigLSalAtl2s364:623037..631921 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006629 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006629EMLSAG00000006629-689395Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029032EMLSAE00000029032-737960Lepeophtheirus salmonisexon
EMLSAE00000029033EMLSAE00000029033-737961Lepeophtheirus salmonisexon
EMLSAE00000029034EMLSAE00000029034-737962Lepeophtheirus salmonisexon
EMLSAE00000029035EMLSAE00000029035-737963Lepeophtheirus salmonisexon
EMLSAE00000029036EMLSAE00000029036-737964Lepeophtheirus salmonisexon
EMLSAE00000029037EMLSAE00000029037-737965Lepeophtheirus salmonisexon
EMLSAE00000029038EMLSAE00000029038-737966Lepeophtheirus salmonisexon
EMLSAE00000029039EMLSAE00000029039-737967Lepeophtheirus salmonisexon
EMLSAE00000029040EMLSAE00000029040-737968Lepeophtheirus salmonisexon
EMLSAE00000029041EMLSAE00000029041-737969Lepeophtheirus salmonisexon
EMLSAE00000029042EMLSAE00000029042-737970Lepeophtheirus salmonisexon
EMLSAE00000029043EMLSAE00000029043-737971Lepeophtheirus salmonisexon
EMLSAE00000029044EMLSAE00000029044-737972Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778961auto778961Lepeophtheirus salmonispolypeptide
EMLSAP00000006629EMLSAP00000006629Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006629

>EMLSAP00000006629 ID=EMLSAP00000006629|Name=EMLSAP00000006629|organism=Lepeophtheirus salmonis|type=polypeptide|length=1183bp
MYIVINPFKTRMSFCFFYLLTIYTLIENVRPQAYLNDEEAYSDWNGNPVE
YTIGGVLSGQKDVYEHFNNVVQELESTIMRGKMSLNTSTQAMDTNPIKTA
ITVCDQLIQRQVYAIVVSKPENGDLSPASVSYTAGFYHIPVIGISSRDSA
FSDKNIHVSFLRTVPPYSHQADVWVEMLKLFKYRQLVFIHSSDTDGRALL
GRFQTKTQDLQADDQEXKVQVEKVEEFEPGQGSYLQTLLKIEECQARVYF
LYANTDDATQIFADATTLNMTGAGYVWIVTEQALKSPMVPSGTLGLELVN
ANDEKAHINDTLHILAQALLELYNEGNITEAPSNCNISGVLWETGKRLFD
DIQKQVLEDGATGRVAFDSMGDRIYAEYDITNIQNDRRNNFQKGVVVGKY
HYSKERHRMELHLDEENIKWPGDLTQKPTGLMIPTHLHVLTIVEKPFVYE
RLIDPSKGEKCNSTSEIECPMYYPMARNIPGAERMYCCSGYCIDLLKLLA
EHCNFTYSLHVSFIEYGSLERNNETGKLEWNGLIGELVDGXAXLIVAPLT
INPERAHVMEFSKPFKYQGITILQKRQPRASQLVSFLQPFKYTLWVLVLV
SVHIVALCLYLLDRFSPFGRFHSGPDPGNVQKEESLNFTSAIWFAWGVLL
NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLDKPQTSLT
GINDPRLRNPMENFTYATVKGSSVDMYFRRQVELSNMYRTMEXKHXRXPE
XAIRAVKEEKLKAFIWDSSRLEYEAARDCDLITAGDLFGRSGYGVGLQKG
SPWADKVTLAILDFHESGKMEDLDNKWILLNNDDDCKAKDDNSPATLGLR
NMRGVFILVGVGIIGGLGLIVIEIIYKKHQMRKQKRTDMARMAINKWRGA
IERRRNLRMSKDNIRSLRHNGLRGSGGSSTALTPIDSYTLSVDTLPRREL
YPSDSTWRLAMDARQSSGGIAVHRNSCGSVNRLNVDNWAKQADDDEVSSS
TPPPVPPHRSYSHEDSKSTLRKSTAPHXSHSSLLILDVNSGGINPSKSPS
SSESSRKRKKRPPLSGISPSRMNNNNWDGGGHPSLHHHPSDEEEEEIDIN
NQCNSINNIDDPPSQSMSLHDMSSPEFPSIGSDRIPKPPPPPRLYWQQQQ
QQMYPGHHYHHHTAAPGQQRVRRRNYPTDDSDV
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mRNA from alignment at LSalAtl2s364:623037..631921-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006629-702476 ID=EMLSAT00000006629-702476|Name=EMLSAT00000006629|organism=Lepeophtheirus salmonis|type=mRNA|length=8885bp|location=Sequence derived from alignment at LSalAtl2s364:623037..631921- (Lepeophtheirus salmonis)
ATGTATATTGTGATAAATCCATTCAAGTATTTTTCCATCCTTGTAAAAGC CAATGATCTGTCATAAAGAAACTTTCCTTATTCACGGTAAGACTCCGAAG TGAAATGTTTTTTGAAATAATGATTAAAAGTTCATTAAAATGAACAATGT ACCTGTTGACTCCCTATAAACATAAATGTACTTGAGGTACTTAAAGTCAC CTGTTGGGTAAGGTTTTAAATGCGCCATGCTCTTTAACTTTTAAACCATC ATTTTTCAGAACCAGAATGTCGTTTTGTTTTTTCTACCTTCTTACAATTT ACACCCTTATTGAAAATGTAAGGCCCCAAGCCTACTTAAATGACGAGGAA GCATACAGCGATTGGAATGGGAATCCTGTGGAGTATACAATAGGAGGAGT TTTATCCGGACAAAAGGATGTCTACGAACATTTTAACAATGTTGTTCAAG AATTGGAATCTACAATCATGAGAGGGAAAATGTCCTTGAATACTTCCACA CAAGCGATGGACACCAATCCCATCAAAACAGCCATAACAGTTTGTGATCA ACTCATTCAGAGACAAGTAAAATATCCTGGTTTCTTCTTTTCTTATGATT AGATAAAACTAATTATTTGAAGGTTTATGCCATCGTGGTTTCAAAGCCAG AGAATGGGGATCTTTCTCCGGCCTCCGTCTCTTATACAGCAGGTTTTTAC CACATCCCTGTCATTGGGATTTCCTCGAGGGACAGTGCTTTTTCAGACAA GGTACGTGGCATTTGAAGGAGCATCTTATTTGTTACAACATATGTACATA AATTCTTCACCCATTAGAACATTCACGTATCCTTTCTCCGAACGGTCCCT CCTTACTCTCATCAAGCGGATGTCTGGGTGGAAATGTTGAAGCTTTTCAA ATATCGACAGCTCGTCTTTATTCATTCCTCAGATACGGATGGAAGGGCTC TCCTTGGAAGATTTCAAACCAAAACACAGGATCTACAAGCAGATGACCAA GAGGKCAAGGTGCAGGTCGATATCACTCATGCTCATTTTCTTCTTCTTCT TCTCCATCCTTCTCCAAATGTTTTATATATTTATTTCATCATCGTCACCC ATCCTCAATTCATATTACCTACAATCTTTTTGGATCATTTTCCAACTCAA TCCGTCAGTCAGTCTCCCCTTCCACTCATTTTAGTCCATCTTCCCTTTAG TTGTAACAAATCCGCTTCGTGTTATTTTTTTTTATTCTACAGGTGAGTTT CCACATGCAACGTATGTGTACACGTAAGCAAAGCTTATAGGAATATACGC CTCATCTCTATTAGCTCTGCATAAATTAACAAGGCACTCAAGTATCACGC ATTTCCAATCTCTCTCATGCCACATATTGCATTTCTCATGCATTTCAAAC CCAATGTTCACATGAGAGTCACACAAMCCCACCATAAAGTCCTCAAAACA AGCAACAAGTGTCGTTTAACATTTAATTAAAAGTAAATAATAATAAAAAT TTAAATGCACTATTATTCATTTCCCCGAACTTGCTTAAAAATAAGAAAGA ACGGTTGAATGACGTCACGTAGTAAGATGAACAATTTCACCCCAAACTGA TTTTAAAACTTGAGAGCCCTATAATGATCTTCAAATCACAAAAAATTTCC TTTTTAAAATAAAGAGGTTCTGTGATTTAAAATGTTTCGCGTTTCTAGGA GATAAAATGACACAATACATTTTTAAGCGCGTAAGTAATTGCTGTGCTTT CAAAGTTTAATTCACTCCTACAAATCAGACAAATTTTAAACCACGAATCC ATTTTGGAAAGAAGAATTGTTGAAGTTTGAAGATTATAAATATGCAAATT TCTTTAAAATAAATTGTTTTTGGACCCACTCTAAAATTGTACGTTTTGAT TACGTGTATACATAGGTATAATAGATGTGGAAATTCACTTTTACGCAAAT AGCCAGAGGTAGTTACGTGGACTTAGTTTATATTTGAAGACTTGGATTTT GTCTTGTGTTCCAAATCAAAGACTCCAGACTTTGCTGGACTTGAGACCAT TTTTAATCAACTTTTTCAAAAGCAATGGCGTCGCTAGCTCCTATGATCAT CTTAATCATTTATATATAAAACAAACCTAGATATAAATGTAATTATACAA CGATGTTGATAATTCACACACACAAATGATGAAAGCTAGCAATCGCCCCG GTTTCAATTTTTTACTGAATATACATATAGTACTCTTTAATGTACGTTTT AAGAAGAGTGCTTTGAGGAAAAATTCAGTCAGAGAGAGAATAAGTAACTA ATACTAACGATAAATACTATACTATACTATTTGGCTGTGGCTGTGGCCAT TAATCATTTATTATAATATGTTGGTCAAAAAGTAATTTCGTATTTTTCTC TTTATTTCAATGCTTTATAAGAAGTGTTACAATCTTCCGATTTAAGCCAA ATATGCCCCGTTCGGTTGAATAATTTGCTTCCAACGAGAATCCAACTTCA TAATCCTCTTTTTGTAGAATCCCTTGTCCCTATTGGCAAAAAGCTCAGAG AACCAATTTTCTCAGGCATATATTGAGGGCCAATTTGTACGCCCAAGCAT GAGCGGGCCCAGCACAATACTGTTAAAAGTGTTTGTAGTATACATTTACT CCCTTTACAACGTCTTATCATTTGATTTGATGTGACCAATAATATAAAAG ATATTCATAGTTCAATAAAGGGTGCGGGAAATACTAAAATACTTTTTCCC CAGCCTAATATATAACTAATTCATATTGGACTCAAGAAGAATCTTAAAAT TTGAATCAACAAATAAATAATAGTTATAATTATGGACATTAAATGAGGTC GAAATTAATTTGAGGACACCATAAAAATATTTAGAGACTTGAACTTCATA GCACAGACTTGTGACTCGATATCATTGACCTGTGACTATACTGAGATTTG TAACATTGAGACTTTTCCCCACCTCTGCAAGTGGCACATATAATTTGTCT GACATATTAACCGTTGATGAACCGGTTTAAAGACTCAGCMTTGAATATTT TCTCGGTAATATCTGAGTGTCCAAAAATCACTTTATGAGTACTTGTTGTA TGTCCTTTAAAACTATATTTCCTCGAAGGTAGTAGGTTTATCCGTCACCA AGAGAGGATTATTAAAAAATTTAGCTCTGAAGTATTTTTTGTAAACAAAA ACAATTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNCCTTAGATGTCAAACAAAATTAACGCTAGAATGGACACGCATTG AGTTCATACTAAGGGGCCAAGTTGTCGTTTTCAACACGTTCATCATTTTT TAATGAATATATTATTATTGAAGTTACTAATTGATTTGTATTTATTAGCA AATATTAGTAATTCAACTCTTTCTTATAAATACTAAACCATACAATATCA GTCAATGTTATTTTAACTTTGCCTGTTAAAGGTTAACTCGTAAATATCTT CAACATTTAAGAAATGTATTTATAATTGCTAAGGATAAAAGTGTATTTGT AGAAACAAGCTCAATTTGATATGAACACTGATTCAGCTTAAAAAATGACA CCGAGAATTGAAAAAGTTCGAAAAGGACACCTCGGCCATTTGAGTGTGAA TTTATCTTGCAAAGAAAATACTGGATGAAGCCAAATATAAGGTTGCATCT GAGCTTATGCAGGACTGAAGACTGTTGTCCTTGATGACGTCAATCAATTA TATTCTTTCTTTTTATAAACAATTCTCAAGGTGTCCGTAAAGGGTGGGCT GGAGGGGGTGTAGTCCCCCCCCTAAACATCCAAATTTCCTACAAATATAA ATCTTAATTTTTGTTTACAAAAATATTTAATTTTTTGTGAGTTACTGTGG ATTTTTGAAATTTGTTTCTAAAATATTTAATATTTGATTTTTTTCTTCAA AATTTTTTATATTTGAAATTATGTTACAAAAAATATAATTATTTGTCAAC AGCTATAGATTTATGAATTTTTTAATAAAAAATATACTCCTGCAGACGCC CTTGGTTCTAGTACTGACCGTCCGAAGGACCAATGGTCTAAAAAATTTAC TGGACTCAATAAATAAGAACTGACACAMCTYTAGCCACATCCATAAATTT TCGTTTTTTAAGGTTATAAATTTTTGTATTTGACTGTTGCCTTGCTATAT TTTTCTACTTATTAAAATAAATGTGATTTAATTATCCAACTGAATGTATT TGAACTTATTAATTGTCATTCAATATCAAGATGATATCCATCTCACTTTT TTCTTTTTCTTTCCGATTATTTCAAAAGAATCCAGATACATTCAATGACT CCAAATTGTCCTTAGCCTCCTCCTTACCCTCATGATCCTCCTATTCAAAT AGGTTTGTAATCTAGTAGTCTTTATACGTATAAATATAATATTCCAACAC TGTGGAAAAGTTATTACTTATTATTCAAGTTATAACTTGTTAATTTATGT ATTTATAATTGTTGTGTACAAGTTTTAACCCAAAAAGAATTTAGGGGTAT TTGTGATAAGGAAAATACACTAATTGAATGTTCGTTAAATGGTCAAATAT TAATGGAGCAAATTTTTAACTTTTTAAATGAAAATTACTCATTGTATAAG TATTAGTTGGTACATTATAGAGCTCAAATCCCCATAGTAACTAATTATAT TAATCGTAAATACATAATAGATAAGTAATTGTAATAGATCAAATTGAAAT GATAACATTATTTAATAGTTAGTAATTAGATAAAAGGTCATGAGACGTAG AAATTTTAATTTGTACAATCGCTTAATACAAGTTACAACTTGTAAAGAAC TCGCAATTTGTACACAACATATTATTTAAAAAAATTGAATGACTTGTATG GCAATGGAGAAAATTGTTGAAATAGTTTATAATGTTATATATATTGCATG TTTCACACACTACTTTTGTATAATTAATTATTAAATATTTTTGAAATGGT AAATTTATAGGAGTGGAGGATAGCACATGGTTTAAATGATTTCTCTTAAT TGTTTGTGATCCCGGTTTTAGGGTCTTTAATTTTTAATACTTATAATTCA TTTTTAACACATAATTTTATTCATTCTATCAAGTTTCTAGGAGTGGAAAA CTCGAGAATTTTTAATAGTAACATTATCCATTAATAATTAATCAATTAAA ATGATTTCCTATCTTTCAATATCATACTTTATTACTGCTTTGAATATTGC TCCAGACTCCATCATTTTCAAGTTTATTTCAAAGAAATCAGATTACTGAT ATATTTAGCAAATTATAAAAATGTTAGGAGCATTTTAAATCCCCTCCAAA AAAATCCTTGATAGATATTTTTTTTAAATTCTCTGTATTTAGCTCTTATT ATTTTCATGATTTAGGTTGAAAAAGTTGAGGAATTTGAGCCTGGTCAAGG ATCCTATCTTCAAACTCTTTTAAAAATTGAAGAATGCCAGGCTCGGGTTT ATTTTCTTTATGCTAAGTGAGTTCTTTAATGTACTTGATATTGTAGAATT CATTTAATTATTAAATATATCAAACTCAGCACAGATGATGCCACTCAAAT ATTCGCAGATGCTACAACATTAAATATGACCGGAGCAGGTTATGTTTGGA TCGTCACAGAGCAAGCTCTAAAATCTCCTATGGTTCCAAGTGGAACATTG GGGCTCGAACTGGTGAATGCTAACGATGAAAAGGCACACATTAATGATAC TCTGTAAGTTTTTTCATTAATTAAAAGGGAAGAAGCTTATAGTTATCCAT TTTAGGCATATTTTAGCACAAGCTCTCTTAGAACTATACAACGAAGGTAA TATAACCGAGGCGCCAAGTAATTGTAACATATCAGGAGTTCTTTGGGAAA CTGGAAAAAGGCTTTTTGATGATATACAAAAACAAGTTCTTGAAGATGGT GCAACAGGGAGAGTGGCATTTGATTCGATGGGAGATCGAATTTATGCTGA ATACGACATCACAAACATTCAAAATGATAGACGAAATAACTTTCAAAAGG GAGTTGTAGTTGGGAAATATCATTATTCAAAGGTGATTGCCTCTCAGCAT ATTCATAATACCAGTCTTTATTGTACAAAACTGTCTTTCAATTAGGAGAG ACATCGAATGGAGCTCCATTTGGATGAAGAAAATATAAAATGGCCAGGGG ATCTTACACAAAAACCAACAGGACTTATGATACCCACTCACTTGCACGTT TTAACCATTGTAGAAAAGCCATTTGTGTACGAACGCCTTATCGATCCATC CAAAGGTGAAAAATGCAATTCCACCAGTGAAATCGAATGTCCAATGTACT ATCCCATGGCAAGAAATATTCCAGGAGGTATAGCTATAGAAATATATGTT TATATATTAAATGTAATTTGTAAATTGTAATCCATATCCAAACTCTTAAT GATGCAGCTGAACGAATGTATTGTTGCTCCGGATATTGTATTGACTTACT AAAGCTGTTAGCAGAGCATTGCAATTTTACTTATTCGCTTCATGTTTCAT TCATTGAGTATGGAAGTTTAGAAAGGAATAATGAGACAGGGAAGTTGGAA TGGAATGGTTTAATTGGAGAATTAGTGGATGGGRCGGCGGRTCTAATTGT AGCTCCTTTAACTATAAATCCTGAAAGGGCTCATGTGATGGAATTCAGTA AACCTTTCAAATATCAAGGAATCACTATCCTTCAAAAAAGAGTAAGTAAT CATCAGTTACAAATATCATTTTCACAACTAATAATCATAAATACTAATTT AGCAACCAAGAGCATCTCAGCTGGTTTCATTCTTGCAACCATTCAAATAT ACACTTTGGGTCTTGGTTCTCGTGTCAGTTCACATAGTGGCATTATGTCT GTATCTACTGGATAGGTTTTCTCCTTTTGGAAGATTTCACTCTGGCCCAG ATCCAGGGAACGTTCAAAAGGAAGAATCTTTAAACTTTACGAGCGCTATA TGGTTTGCTTGGGGTGTGCTACTCAATTCAGGAATTGGGGAAGGGACACC AAGAAGCTTTTCTGCACGAGTATTAGGAATGGTCTGGGCAGGATTCGCCA TGATCATTGTTGCTTCTTACACGGCTAATCTTGCTGCATTTCTTGTACTC GATAAGCCTCAGACGAGTTTAACAGGAATCAACGATCCGAGGGTTTGTAC AAATTTATAAAATTTAATACCAAAGAAGATTTGAAATAATTTTCAATGTT TTTTCTTAACGCTAGTTACGGAATCCTATGGAAAACTTTACATATGCCAC AGTAAAGGGTTCTTCTGTGGATATGTACTTCAGACGACAAGTGGAACTAT CTAATATGTATCGTACTATGGAAGRAAAACATTAWAGAYCACCAGAARAA GCCATTAGAGCCGTAAAAGAAGAGTAAGGGATGAAAATATTTTGAATTTG AATAAAATATGTAGCTTCTTTTTCATTTGACATAGAAAATTGAAAGCATT TATATGGGACAGCTCAAGACTTGAGTACGAAGCTGCTAGAGATTGTGATT TGATAACCGCTGGTGATCTTTTCGGTCGAAGTGGCTATGGAGTTGGTCTT CAAAAGGGTTCGCCATGGGCTGATAAAGTTACATTGGCTATACTTGATTT TCACGAGAGTAAGTAAAAATAATATATTATTATCTTTTATTGTATATCAA TATCATAAAATATATTTCTATACTGAAACTAGGTGGCAAAATGGAAGATC TAGACAATAAATGGATTCTATTAAATAACGATGACGATTGCAAAGCTAAA GATGATAATTCTCCAGCAACTCTTGGACTCCGAAATATGAGAGGMGTTTT TATTCTTGTCGGAGTTGGAATCATAGGAGGCCTAGGTCTAATCGTTATTG AAATAATCTATAAGAAACATCAAATGAGAAAACAGAAACGAACTGATATG GCAAGAATGGCTATTAATAAATGGAGAGGTGCTATCGAACGACGAAGGAA TCTAAGAATGTCCAAAGATAATATCCGGTCCTTACGACATAATGGCCTTA GAGGATCAGGTGGTAGTTCAACCGCACTTACACCCATTGATAGCTACACT CTCTCAGTTGATACTCTACCTAGGCGAGAGCTTTACCCTAGTGATTCCAC ATGGAGATTAGCAATGGATGCTCGACAGAGTAGTGGAGGGATAGCTGTGC ATCGTAATAGTTGTGGCAGTGTAAATCGTTTGAATGTGGATAATTGGGCA AAACAAGCTGATGATGATGAAGTCAGTTCCTCAACACCCCCTCCAGTTCC ACCTCATCGAAGTTACAGTCATGAGGACTCTAAATCAACTCTTCGAAAGA GTACAGCTCCTCATCMCAGCCATAGTTCACTACTGATACTGGACGTTAAT TCCGGAGGAATAAATCCGTCGAAATCTCCCTCGTCTTCCGAGTCCTCTCG AAAACGTAAAAAACGTCCTCCTCTGTCAGGAATATCTCCTTCGCGAATGA ATAATAACAATTGGGACGGAGGTGGCCATCCAAGTCTACACCATCATCCC TCAGATGAAGAAGAGGAAGAAATTGACATCAATAACCAATGCAATTCCAT CAATAATATTGATGACCCTCCGTCTCAGTCTATGAGTTTACATGATATGT CAAGTCCGGAATTTCCGTCAATAGGTTCAGATAGAATACCCAAGCCCCCT CCACCCCCACGACTTTACTGGCAACAACAGCAGCAGCAAATGTATCCAGG TCATCACTATCATCACCATACAGCAGCTCCTGGGCAACAAAGAGTTAGAA GGCGGAATTATCCGACAGATGATAGTGATGTTTAA
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