EMLSAP00000006629, EMLSAP00000006629 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000006629
Unique NameEMLSAP00000006629
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1183
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001508NMDA receptorPRINTSPR00177NMDARECEPTORcoord: 852..876
score: 62.0
coord: 504..532
score: 32.41
coord: 594..619
score: 77.69
coord: 666..693
score: 96.43
IPR019594Glutamate receptor, L-glutamate/glycine-bindingSMARTSM00918Lig_chan-Glu_bdcoord: 474..539
e-value: 3.4E-12
score: 56.5
IPR001320Ionotropic glutamate receptorSMARTSM00079PBPecoord: 466..830
e-value: 4.8E-65
score: 232.1
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 593..863
e-value: 7.2E-35
score: 119.7
IPR001828Extracellular ligand-binding receptorPFAMPF01094ANF_receptorcoord: 100..382
e-value: 3.7E-26
score: 91.6
NoneNo IPR availableGENE3D3.40.190.10coord: 435..606
e-value: 7.1E-42
score: 142.1
NoneNo IPR availableGENE3D1.10.287.70coord: 607..689
e-value: 5.2E-8
score: 31.8
NoneNo IPR availableGENE3D3.40.190.10coord: 690..794
e-value: 1.2E-37
score: 128.2
NoneNo IPR availableGENE3D3.40.50.2300coord: 252..374
e-value: 3.2E-25
score: 88.4
coord: 50..166
e-value: 3.2E-25
score: 88.4
NoneNo IPR availablePANTHERPTHR18966:SF41GLUTAMATE [NMDA] RECEPTOR SUBUNIT ZETA-1coord: 95..910
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 95..910
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 445..577
coord: 695..828
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 592..691
NoneNo IPR availableTMHMMTMhelixcoord: 593..612
NoneNo IPR availableTMHMMTMhelixcoord: 636..655
NoneNo IPR availableTMHMMTMhelixcoord: 854..876
NoneNo IPR availableTMHMMTMhelixcoord: 670..692
IPR018882Calmodulin-binding domain C0, NMDA receptor, NR1 subunitPFAMPF10562CaM_bdg_C0coord: 874..902
e-value: 7.7E-8
score: 31.9
IPR001638Extracellular solute-binding protein, family 3PFAMPF00497SBP_bac_3coord: 489..828
e-value: 7.1E-18
score: 64.5
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 83..431

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000006629 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000006629EMLSAT00000006629-702476Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000006629 ID=EMLSAP00000006629|Name=EMLSAP00000006629|organism=Lepeophtheirus salmonis|type=polypeptide|length=1183bp
MYIVINPFKTRMSFCFFYLLTIYTLIENVRPQAYLNDEEAYSDWNGNPVE
YTIGGVLSGQKDVYEHFNNVVQELESTIMRGKMSLNTSTQAMDTNPIKTA
ITVCDQLIQRQVYAIVVSKPENGDLSPASVSYTAGFYHIPVIGISSRDSA
FSDKNIHVSFLRTVPPYSHQADVWVEMLKLFKYRQLVFIHSSDTDGRALL
GRFQTKTQDLQADDQEXKVQVEKVEEFEPGQGSYLQTLLKIEECQARVYF
LYANTDDATQIFADATTLNMTGAGYVWIVTEQALKSPMVPSGTLGLELVN
ANDEKAHINDTLHILAQALLELYNEGNITEAPSNCNISGVLWETGKRLFD
DIQKQVLEDGATGRVAFDSMGDRIYAEYDITNIQNDRRNNFQKGVVVGKY
HYSKERHRMELHLDEENIKWPGDLTQKPTGLMIPTHLHVLTIVEKPFVYE
RLIDPSKGEKCNSTSEIECPMYYPMARNIPGAERMYCCSGYCIDLLKLLA
EHCNFTYSLHVSFIEYGSLERNNETGKLEWNGLIGELVDGXAXLIVAPLT
INPERAHVMEFSKPFKYQGITILQKRQPRASQLVSFLQPFKYTLWVLVLV
SVHIVALCLYLLDRFSPFGRFHSGPDPGNVQKEESLNFTSAIWFAWGVLL
NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLDKPQTSLT
GINDPRLRNPMENFTYATVKGSSVDMYFRRQVELSNMYRTMEXKHXRXPE
XAIRAVKEEKLKAFIWDSSRLEYEAARDCDLITAGDLFGRSGYGVGLQKG
SPWADKVTLAILDFHESGKMEDLDNKWILLNNDDDCKAKDDNSPATLGLR
NMRGVFILVGVGIIGGLGLIVIEIIYKKHQMRKQKRTDMARMAINKWRGA
IERRRNLRMSKDNIRSLRHNGLRGSGGSSTALTPIDSYTLSVDTLPRREL
YPSDSTWRLAMDARQSSGGIAVHRNSCGSVNRLNVDNWAKQADDDEVSSS
TPPPVPPHRSYSHEDSKSTLRKSTAPHXSHSSLLILDVNSGGINPSKSPS
SSESSRKRKKRPPLSGISPSRMNNNNWDGGGHPSLHHHPSDEEEEEIDIN
NQCNSINNIDDPPSQSMSLHDMSSPEFPSIGSDRIPKPPPPPRLYWQQQQ
QQMYPGHHYHHHTAAPGQQRVRRRNYPTDDSDV
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