EMLSAT00000006635, EMLSAT00000006635-702482 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000006635
Unique Name	EMLSAT00000006635-702482
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s364	supercontig	LSalAtl2s364:431365..436797 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000006635 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000006635	EMLSAG00000006635-689401	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000029068	EMLSAE00000029068-737996	Lepeophtheirus salmonis	exon
EMLSAE00000029069	EMLSAE00000029069-737997	Lepeophtheirus salmonis	exon
EMLSAE00000029070	EMLSAE00000029070-737998	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto777611	auto777611	Lepeophtheirus salmonis	polypeptide
EMLSAP00000006635	EMLSAP00000006635	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s364:431365..436797-

protein sequence of EMLSAP00000006635

>EMLSAP00000006635 ID=EMLSAP00000006635|Name=EMLSAP00000006635|organism=Lepeophtheirus salmonis|type=polypeptide|length=229bp
MSEQKAKGSASQITYEVEVAYIIDIMKCSRSLVFKVENIKNFGEDLFRKY
ENHCETKYKTYELEQDEPECKMVEELRCQNVTVELFHIDQGETDKPFXXX
XXXXXXXXXXXXXXXXXXKKVHPDVECKKVPRQVCAPSNCNTKPGEEICH
EESRTQIQNVPEEECDLEPEENCRMESSLVPRLVPKQNCVKVPKEVCVNT
KKNPKKVTKPIVKQWCYNPNDLTKKVEDL

mRNA from alignment at LSalAtl2s364:431365..436797-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000006635-702482 ID=EMLSAT00000006635-702482|Name=EMLSAT00000006635|organism=Lepeophtheirus salmonis|type=mRNA|length=5433bp|location=Sequence derived from alignment at LSalAtl2s364:431365..436797- (Lepeophtheirus salmonis)
ATGAGTGAGCAAAAAGCTAAAGGTAGTGCATCTCAGATCACCTATGAAGT
TGAGGTGGCGTATATTATAGACATTATGAAGTGCTCCAGGAGCCTGGTTT
TCAAGGTGGAAAATATCAAGAATTTTGGAGAAGATCTCTTCAGGAAAGTA
GGAAGTAGAAGGCACCATTTAAAGAGGGATCTGGAGTTCCTGTCGAGCTT
GGAGAAGTAGATAAAGGAGGATCTCAACAAATCGATGAATTMCCTCCTTC
GCCAACAACTTCTCCATGGCGGATAGGACCACCAAGAGGAATGTAAAGGG
CGACTTAGGACTGTGTTCATACATGAGGAACTCACACCATCTATTTTTTT
TTTTTTGTACTTTAAGGGGCAAAAACTATTGTTCATCACATCCTTAAACG
ATACAAGACTTCACCAGGCTTTGCTAATGGTCATTTCATTTATTCTAATT
CATGCTTAACTCAACTTTTTTGAAATGGATGAAAGTGGATGGGCCAATAA
CCGGTGATTGGTAATCAGATGTATTTTTCTAGCTCGCCTGGATTTTTTTA
TTTTTTTTGACTGGACAATCTCAGTAGTCAATTTTCTTTTCCTAAGCCGC
TATCATTATTATTTAATTCCTGATGAGTATTCTTCTTTTTCTATTACATA
CTATTAGGGACTGTTAATTTATAAAAATGAGCAAATTCAATTAGGGCCCA
ACTTTTCTATTTTTAATCTTGGTAANNNNTTTCTATTTTTTAATCTTGGT
AAGAAAAAAAAAAAAAAAAAYAAYATCGGMCSCCAAACCCACCCCCCKCR
ATCCCAAAAACTACTTTTTCAACCCCAAATGCTTGTTTTTTAAAAAAATA
TATTTGAAAGTAATAAGAAATAACTCCCAAATATCGTGATCATTAAAGGC
CTTTTATACTTGAGCAATATATTTATAACATTTGAAGTAAATAAGGTTTA
GTTTTATATTCATATTTTTACAAAGGATTACAGTCAAGGATTGGATTTTA
ATGAGGTCAAGGATTACAAATAAAGTCAACATCTTCCAATTTTTATTTTA
GTGGGTGTGCTAAGCTGTTTTATTTTTTAGAGTGATATATTAGTTCGATT
TTCTGTTCTAAATTGATGAAAAAGTTATGTTTGAAAAGTTTCAGTCTTCA
AAAATATTTTTTGTGACCCTTATTGTTATTTGCAAGACATTGTCTTTTTT
TATAGGGATTCAAAGGCTTCAAATGAAAGTTATGTTTCTAAATTTCAAAA
GTTTCTTTAAAGTTCATTTTCTCCAGTGATACAGAACAATATAATCCAGA
TTTTTCATTTTGAAGAAAAAAATTTAGAGCCCAACGAGCTTCGTACTTTG
GATACTTAAACAATCAGAAACATTGTACTGACCTCCAAATTGAATTAAAT
AAGTATCATAGCTTAGTTTTAAGTTTTATTGCAAGTAGCTTAAGTAATAG
AAATGACTGTTATGTGGAGTATCAAGATCAAAGGGACACATAGTAAGATA
ACTGAACATTAACAAAATCTTTTTATGAAGTGAGAGAAGAAATCCAAAAT
AACTTTTGTAAAAAAATGATTCAGTATTGCTGAAGGATATCAAACTTCCA
TGGAGATACGGAAAATGGTTTGGCTTTACATAACTAACAACTAATTTTTT
GTTAGAGTGCTAGAGTCCTGTAATACCAAAAATTAGAGCTAAAATAGAAC
TTGTTCTTAAATTTTTACAAAAAATTTCAAAATTTAACTTTTTTTCACAA
AATAATAAATTTTTCGAAAAAAAATATAAAACATTATTTTTTTTGAAAAA
AAAATTTACAATCCATAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAA
AAAAAAAAAAAAKAAAAAAAWWAYATTTNGWAAWAAWAMTTTKAAAWAKT
TAWTTTTCCCGAATGACCTTTTTTTATAAYAAAWAACTRTTACAAAAGAA
TAATTCCCCCATTTTTGCACAAATTTTTAATCCTGACCAAAAAATTTATA
ATAAAAAGCAAAAAATCCTTAATTTGAGGGGGGCTACACCCAGTCCAACC
TACCTACTGCAGACACCCCTATTATATATAATATACTCGTAAATGAAACA
GAAACGAATATCTCCGTGTTTGCATAAGAGATGGATTTGTTATAGAGGTA
TAATTGTAAGTCCTTGTTGGACTTAGAGTAAAATTGAGGATCGATATCGT
TTTGTTGGATAATTATATTATACAGATGTCAATTTTCTTAAGAATAAGCT
TGAGGACCCAAGTTTGATCCTTATAATAGGTGAAGTGGTATATTCAGGGA
AAATCAGCTTGATTTTTAATTAAATTCATTCACCTCTGCTGTTCGACCAT
GTCCGAACGTATTTTTCTATACTTTAAGTTGGTGGTCCAAAACGTATAGT
ATCTGTGTGCTTCATCAAAAGTCTACTTGTCCTCGTGTGGGTTATAATGT
TGGAAACCTAACTTCTTGTTTATTCAAAAGCCAGAGCTCTCCAGCTGTGG
TAATATTGAAAACTGAATAGTATTCATTCCTTGTAGCCAGTCTTAGATTG
TAGTTTACTGGTTCGTCATGGCCTAGGATCTTGCATATAATTTCAACAAA
AATAATACAATAAATAGATGTGTGCCTAAGCTCTCTTAATCATTAATGTA
GCCGCCCTTAGTGGGAACGATGGCTTCCAGGTGCTGCCTTTGAGAGCCTC
GATGTTTGGATCACGGACACTGCAGGCCTTCCCCTCGKCATGCATCCAAT
GTAGTGTCTAGGATGTTGGCATCAGGGCTATAAGATGGCCAAGTGTGTCA
AAAATAGTCCAAAAGAATCATTCAAAAGGGTCTTGCAACAGAGGGGGTGG
GCTTCTTTCATTGCTGGTGTCAACAGTGGTCTCTCCCTTCAAGGGCCCTT
TCCACCCACTTTTTGATAGCTCTCTGGACACTTTGGTGTAAAACCCCAAG
ATCTGATGCTAGGAACCTGACAGACTTGACGGGATTGTCCTGGGCTGCTT
TCTTAAATTCCTCTGGGTCCAGTTTGAACTTTCTTTCTCTCCAATGTTTC
GGAATTGCCGACGTCAAAGGGGGTGATACTGGAGACGTCTTACTGCTTGA
AGTGCGTGAATTGAAATTTGTCCATCACATTCAAGAGTCATTTTCTCAAC
TTGCACGTAAGCTAGAGAGCGCAGGTTTGTTTTATTTTGTAAGTTATTGT
TTATACTTAAAAATATCAAAATATGAATTAATTTCAATCACTCAACCTGC
AATAATTACGGTATTAGTAAGTGTTCAGATTTCAATGGACCACCCAGTAT
ATAAATAATAAATACTGTAAAATTAAAGTAGTTCTTTTTATATATAAGAT
GAATCCCGTGTTTTCGAATTCTGTAACCTGATCGAACTTGTAACAAATAA
ATTTGAATAGAAATTGATGAACAATCTAATTTTTGATAGAACTGAGAGTC
ATATAATTGTAAAAAACACAAACCATCCCGCGGGCTAAAAGTCACTCGCA
CATCATTGGAATTGTTGTCATATCTATACNAAATCATATCTGGGAGACAA
AACTTTAGCAAAAGATATAAGATATGAGCTTACAAATAAAAGAATGTTAA
AGAATCGGAAAAGAAACCATTCATAGGATTTTCTAGGAATATTTGTAGAA
CTTAAACGTAAAAATTTATGAAACAAAAAAATAATCATAATATTTTCTAA
KAMTAGAACAAAATTAATATCGAGTTGCATCAAAAGGAGAACATTTCAAA
CTGAGTGAACATAGGATGAAGAATTAACTGTTAATGGGGAATAAAAAGGA
AATTAAGAGCAGGCATTTAAGCAAATATGCATTTATTGTTTTTTAGGTAT
ATAAGCCTGAAAAGACAACAAGGATATCATCAGTTGTGATTTGGATTTGC
ACTAAAACAACAATAATAATACTATTCCATCGCCAATACACCAAATCATG
AACATTAAACCAATAATTATTTTGGTACGCCAATATTTCAGGATTGCATT
AATCCCTAACGATACTAAAACAACTATTTTTAAATATTTTTATTAAAGGT
TATCACTACTCAGCTCTATGCTCAAACTGAGGCCCAAAGAAATTTCGGTC
AGGGTGATCTTATCAACCTTTTACGACAAGGGGGTGGCTCATCTGGGAAT
GTAGAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGG
AGACCGTCTATGAGCGAGGAATGGAATGCCATCATAGCTTCAAGAAAAAG
TGTCATTTGACATATATCACGGATTATGCCTCAGCTGCTGAAAAGAAGTG
TGAAACCAACTTCAAAAAGAACTGCCACATTACCTTCAAGCCTGTTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCTCCACTCAGTACGAAAACCATTGTGAAAC
CAAGTACAAGACCTATGAGCTCGAACAAGACGAACCTGAATGTAAAATGG
TGGAGGAACTCAGATGCCAAAACGTGACTGTGGAGCTTTTCCACATTGAT
CAAGGAGAGACTGATAAACCCTTTGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAGGTTCACC
CTGATGTCGAATGCAAAAAAGTCCCCAGACAAGTCTGTGCTCCCAGCAAC
TGCAATACTAAACCAGGAGAGGAAATCTGTCATGAAGAATCTAGAACTCA
AATCCAAAACGTCCCAGAAGAAGAGTGTGATCTTGAGCCGGAAGAGAACT
GCCGCATGGAATCCTCCCTTGTCCCAAGGTGAAGGCTTAATTTAAACAAA
GTTACATGATTTATATTATTGCAATATATTTTTTCCAGATTGGTGCCCAA
ACAGAATTGTGTCAAGGTTCCAAAAGAAGTGTGTGTCAACACAAAGAAAA
ACCCAAAGAAGGTCACCAAACCCATTGTCAAGCAATGGTGTTATAATCCA
AATGATTTGACAAAGAAAGTTGAAGATCTATAA

Add to Basket

Search form