EMLSAT00000006635, EMLSAT00000006635-702482 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006635
Unique NameEMLSAT00000006635-702482
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s364supercontigLSalAtl2s364:431365..436797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006635 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006635EMLSAG00000006635-689401Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029068EMLSAE00000029068-737996Lepeophtheirus salmonisexon
EMLSAE00000029069EMLSAE00000029069-737997Lepeophtheirus salmonisexon
EMLSAE00000029070EMLSAE00000029070-737998Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777611auto777611Lepeophtheirus salmonispolypeptide
EMLSAP00000006635EMLSAP00000006635Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006635

>EMLSAP00000006635 ID=EMLSAP00000006635|Name=EMLSAP00000006635|organism=Lepeophtheirus salmonis|type=polypeptide|length=229bp
MSEQKAKGSASQITYEVEVAYIIDIMKCSRSLVFKVENIKNFGEDLFRKY
ENHCETKYKTYELEQDEPECKMVEELRCQNVTVELFHIDQGETDKPFXXX
XXXXXXXXXXXXXXXXXXKKVHPDVECKKVPRQVCAPSNCNTKPGEEICH
EESRTQIQNVPEEECDLEPEENCRMESSLVPRLVPKQNCVKVPKEVCVNT
KKNPKKVTKPIVKQWCYNPNDLTKKVEDL
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mRNA from alignment at LSalAtl2s364:431365..436797-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006635-702482 ID=EMLSAT00000006635-702482|Name=EMLSAT00000006635|organism=Lepeophtheirus salmonis|type=mRNA|length=5433bp|location=Sequence derived from alignment at LSalAtl2s364:431365..436797- (Lepeophtheirus salmonis)
ATGAGTGAGCAAAAAGCTAAAGGTAGTGCATCTCAGATCACCTATGAAGT
TGAGGTGGCGTATATTATAGACATTATGAAGTGCTCCAGGAGCCTGGTTT
TCAAGGTGGAAAATATCAAGAATTTTGGAGAAGATCTCTTCAGGAAAGTA
GGAAGTAGAAGGCACCATTTAAAGAGGGATCTGGAGTTCCTGTCGAGCTT
GGAGAAGTAGATAAAGGAGGATCTCAACAAATCGATGAATTMCCTCCTTC
GCCAACAACTTCTCCATGGCGGATAGGACCACCAAGAGGAATGTAAAGGG
CGACTTAGGACTGTGTTCATACATGAGGAACTCACACCATCTATTTTTTT
TTTTTTGTACTTTAAGGGGCAAAAACTATTGTTCATCACATCCTTAAACG
ATACAAGACTTCACCAGGCTTTGCTAATGGTCATTTCATTTATTCTAATT
CATGCTTAACTCAACTTTTTTGAAATGGATGAAAGTGGATGGGCCAATAA
CCGGTGATTGGTAATCAGATGTATTTTTCTAGCTCGCCTGGATTTTTTTA
TTTTTTTTGACTGGACAATCTCAGTAGTCAATTTTCTTTTCCTAAGCCGC
TATCATTATTATTTAATTCCTGATGAGTATTCTTCTTTTTCTATTACATA
CTATTAGGGACTGTTAATTTATAAAAATGAGCAAATTCAATTAGGGCCCA
ACTTTTCTATTTTTAATCTTGGTAANNNNTTTCTATTTTTTAATCTTGGT
AAGAAAAAAAAAAAAAAAAAYAAYATCGGMCSCCAAACCCACCCCCCKCR
ATCCCAAAAACTACTTTTTCAACCCCAAATGCTTGTTTTTTAAAAAAATA
TATTTGAAAGTAATAAGAAATAACTCCCAAATATCGTGATCATTAAAGGC
CTTTTATACTTGAGCAATATATTTATAACATTTGAAGTAAATAAGGTTTA
GTTTTATATTCATATTTTTACAAAGGATTACAGTCAAGGATTGGATTTTA
ATGAGGTCAAGGATTACAAATAAAGTCAACATCTTCCAATTTTTATTTTA
GTGGGTGTGCTAAGCTGTTTTATTTTTTAGAGTGATATATTAGTTCGATT
TTCTGTTCTAAATTGATGAAAAAGTTATGTTTGAAAAGTTTCAGTCTTCA
AAAATATTTTTTGTGACCCTTATTGTTATTTGCAAGACATTGTCTTTTTT
TATAGGGATTCAAAGGCTTCAAATGAAAGTTATGTTTCTAAATTTCAAAA
GTTTCTTTAAAGTTCATTTTCTCCAGTGATACAGAACAATATAATCCAGA
TTTTTCATTTTGAAGAAAAAAATTTAGAGCCCAACGAGCTTCGTACTTTG
GATACTTAAACAATCAGAAACATTGTACTGACCTCCAAATTGAATTAAAT
AAGTATCATAGCTTAGTTTTAAGTTTTATTGCAAGTAGCTTAAGTAATAG
AAATGACTGTTATGTGGAGTATCAAGATCAAAGGGACACATAGTAAGATA
ACTGAACATTAACAAAATCTTTTTATGAAGTGAGAGAAGAAATCCAAAAT
AACTTTTGTAAAAAAATGATTCAGTATTGCTGAAGGATATCAAACTTCCA
TGGAGATACGGAAAATGGTTTGGCTTTACATAACTAACAACTAATTTTTT
GTTAGAGTGCTAGAGTCCTGTAATACCAAAAATTAGAGCTAAAATAGAAC
TTGTTCTTAAATTTTTACAAAAAATTTCAAAATTTAACTTTTTTTCACAA
AATAATAAATTTTTCGAAAAAAAATATAAAACATTATTTTTTTTGAAAAA
AAAATTTACAATCCATAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAA
AAAAAAAAAAAAKAAAAAAAWWAYATTTNGWAAWAAWAMTTTKAAAWAKT
TAWTTTTCCCGAATGACCTTTTTTTATAAYAAAWAACTRTTACAAAAGAA
TAATTCCCCCATTTTTGCACAAATTTTTAATCCTGACCAAAAAATTTATA
ATAAAAAGCAAAAAATCCTTAATTTGAGGGGGGCTACACCCAGTCCAACC
TACCTACTGCAGACACCCCTATTATATATAATATACTCGTAAATGAAACA
GAAACGAATATCTCCGTGTTTGCATAAGAGATGGATTTGTTATAGAGGTA
TAATTGTAAGTCCTTGTTGGACTTAGAGTAAAATTGAGGATCGATATCGT
TTTGTTGGATAATTATATTATACAGATGTCAATTTTCTTAAGAATAAGCT
TGAGGACCCAAGTTTGATCCTTATAATAGGTGAAGTGGTATATTCAGGGA
AAATCAGCTTGATTTTTAATTAAATTCATTCACCTCTGCTGTTCGACCAT
GTCCGAACGTATTTTTCTATACTTTAAGTTGGTGGTCCAAAACGTATAGT
ATCTGTGTGCTTCATCAAAAGTCTACTTGTCCTCGTGTGGGTTATAATGT
TGGAAACCTAACTTCTTGTTTATTCAAAAGCCAGAGCTCTCCAGCTGTGG
TAATATTGAAAACTGAATAGTATTCATTCCTTGTAGCCAGTCTTAGATTG
TAGTTTACTGGTTCGTCATGGCCTAGGATCTTGCATATAATTTCAACAAA
AATAATACAATAAATAGATGTGTGCCTAAGCTCTCTTAATCATTAATGTA
GCCGCCCTTAGTGGGAACGATGGCTTCCAGGTGCTGCCTTTGAGAGCCTC
GATGTTTGGATCACGGACACTGCAGGCCTTCCCCTCGKCATGCATCCAAT
GTAGTGTCTAGGATGTTGGCATCAGGGCTATAAGATGGCCAAGTGTGTCA
AAAATAGTCCAAAAGAATCATTCAAAAGGGTCTTGCAACAGAGGGGGTGG
GCTTCTTTCATTGCTGGTGTCAACAGTGGTCTCTCCCTTCAAGGGCCCTT
TCCACCCACTTTTTGATAGCTCTCTGGACACTTTGGTGTAAAACCCCAAG
ATCTGATGCTAGGAACCTGACAGACTTGACGGGATTGTCCTGGGCTGCTT
TCTTAAATTCCTCTGGGTCCAGTTTGAACTTTCTTTCTCTCCAATGTTTC
GGAATTGCCGACGTCAAAGGGGGTGATACTGGAGACGTCTTACTGCTTGA
AGTGCGTGAATTGAAATTTGTCCATCACATTCAAGAGTCATTTTCTCAAC
TTGCACGTAAGCTAGAGAGCGCAGGTTTGTTTTATTTTGTAAGTTATTGT
TTATACTTAAAAATATCAAAATATGAATTAATTTCAATCACTCAACCTGC
AATAATTACGGTATTAGTAAGTGTTCAGATTTCAATGGACCACCCAGTAT
ATAAATAATAAATACTGTAAAATTAAAGTAGTTCTTTTTATATATAAGAT
GAATCCCGTGTTTTCGAATTCTGTAACCTGATCGAACTTGTAACAAATAA
ATTTGAATAGAAATTGATGAACAATCTAATTTTTGATAGAACTGAGAGTC
ATATAATTGTAAAAAACACAAACCATCCCGCGGGCTAAAAGTCACTCGCA
CATCATTGGAATTGTTGTCATATCTATACNAAATCATATCTGGGAGACAA
AACTTTAGCAAAAGATATAAGATATGAGCTTACAAATAAAAGAATGTTAA
AGAATCGGAAAAGAAACCATTCATAGGATTTTCTAGGAATATTTGTAGAA
CTTAAACGTAAAAATTTATGAAACAAAAAAATAATCATAATATTTTCTAA
KAMTAGAACAAAATTAATATCGAGTTGCATCAAAAGGAGAACATTTCAAA
CTGAGTGAACATAGGATGAAGAATTAACTGTTAATGGGGAATAAAAAGGA
AATTAAGAGCAGGCATTTAAGCAAATATGCATTTATTGTTTTTTAGGTAT
ATAAGCCTGAAAAGACAACAAGGATATCATCAGTTGTGATTTGGATTTGC
ACTAAAACAACAATAATAATACTATTCCATCGCCAATACACCAAATCATG
AACATTAAACCAATAATTATTTTGGTACGCCAATATTTCAGGATTGCATT
AATCCCTAACGATACTAAAACAACTATTTTTAAATATTTTTATTAAAGGT
TATCACTACTCAGCTCTATGCTCAAACTGAGGCCCAAAGAAATTTCGGTC
AGGGTGATCTTATCAACCTTTTACGACAAGGGGGTGGCTCATCTGGGAAT
GTAGAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGG
AGACCGTCTATGAGCGAGGAATGGAATGCCATCATAGCTTCAAGAAAAAG
TGTCATTTGACATATATCACGGATTATGCCTCAGCTGCTGAAAAGAAGTG
TGAAACCAACTTCAAAAAGAACTGCCACATTACCTTCAAGCCTGTTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCTCCACTCAGTACGAAAACCATTGTGAAAC
CAAGTACAAGACCTATGAGCTCGAACAAGACGAACCTGAATGTAAAATGG
TGGAGGAACTCAGATGCCAAAACGTGACTGTGGAGCTTTTCCACATTGAT
CAAGGAGAGACTGATAAACCCTTTGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAGGTTCACC
CTGATGTCGAATGCAAAAAAGTCCCCAGACAAGTCTGTGCTCCCAGCAAC
TGCAATACTAAACCAGGAGAGGAAATCTGTCATGAAGAATCTAGAACTCA
AATCCAAAACGTCCCAGAAGAAGAGTGTGATCTTGAGCCGGAAGAGAACT
GCCGCATGGAATCCTCCCTTGTCCCAAGGTGAAGGCTTAATTTAAACAAA
GTTACATGATTTATATTATTGCAATATATTTTTTCCAGATTGGTGCCCAA
ACAGAATTGTGTCAAGGTTCCAAAAGAAGTGTGTGTCAACACAAAGAAAA
ACCCAAAGAAGGTCACCAAACCCATTGTCAAGCAATGGTGTTATAATCCA
AATGATTTGACAAAGAAAGTTGAAGATCTATAA
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