EMLSAT00000006788, EMLSAT00000006788-702635 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006788
Unique NameEMLSAT00000006788-702635
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3807supercontigLSalAtl2s3807:4631..5407 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006788 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006788EMLSAG00000006788-689554Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029806EMLSAE00000029806-738734Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768558auto768558Lepeophtheirus salmonispolypeptide
EMLSAP00000006788EMLSAP00000006788Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006788

>EMLSAP00000006788 ID=EMLSAP00000006788|Name=EMLSAP00000006788|organism=Lepeophtheirus salmonis|type=polypeptide|length=259bp
MSKDSIVDFIAGSLGAIVGVYIGKPLDTLKVKMQAFPHLYPNLVTCCKET
WNKEGVVRGLYAGTVPSLVGNVAENSVLFAAYGICQNLVAKKVGRCKVDE
LTIFHNGTAGFMAAFWSSIVLCPTELVKCKLQTMREVSSLKGLPPPNLGP
FLMTKHILKQNGVPGLFVGLTATFMREMPGYFAFFYSYELSREMMRPLGK
TKEEIGSAKTILAGGIAGMTLWILVFPVDVIKSRLQISGFNTSMYRMMAD
IARNEGIFA
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mRNA from alignment at LSalAtl2s3807:4631..5407-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006788-702635 ID=EMLSAT00000006788-702635|Name=EMLSAT00000006788|organism=Lepeophtheirus salmonis|type=mRNA|length=777bp|location=Sequence derived from alignment at LSalAtl2s3807:4631..5407- (Lepeophtheirus salmonis)
ATGTCTAAAGATTCAATTGTTGATTTTATTGCTGGATCCCTCGGAGCCAT
CGTCGGTGTCTATATTGGGAAGCCCTTGGATACTCTGAAAGTGAAAATGC
AAGCATTTCCCCATCTCTACCCCAATTTGGTAACTTGTTGCAAAGAAACT
TGGAATAAAGAAGGAGTTGTAAGAGGATTATATGCCGGAACCGTTCCAAG
TCTTGTAGGAAATGTAGCTGAAAATAGTGTACTCTTTGCAGCCTATGGGA
TTTGTCAAAATTTAGTAGCAAAAAAAGTTGGACGATGCAAAGTGGATGAG
CTTACTATATTTCACAATGGGACAGCAGGGTTCATGGCTGCCTTTTGGTC
TTCTATAGTTCTTTGTCCAACAGAGCTTGTAAAATGTAAGCTTCAGACTA
TGAGGGAAGTCTCATCATTGAAGGGCCTCCCTCCACCAAACCTGGGACCT
TTCTTAATGACTAAACATATTTTAAAACAAAATGGAGTACCTGGATTATT
TGTAGGATTGACAGCCACATTTATGAGAGAAATGCCGGGATACTTTGCCT
TTTTTTACTCTTACGAACTCTCTAGAGAAATGATGCGGCCATTAGGTAAG
ACTAAAGAGGAAATCGGTTCTGCAAAGACCATCTTAGCTGGTGGAATTGC
TGGAATGACTCTCTGGATTTTAGTATTTCCTGTGGATGTGATTAAAAGTC
GACTTCAGATATCTGGTTTCAACACTTCTATGTATCGAATGATGGCAGAT
ATAGCAAGGAACGAGGGAATATTTGCT
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