EMLSAP00000006788, EMLSAP00000006788 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000006788
Unique NameEMLSAP00000006788
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length259
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 205..258
e-value: 1.9E-8
score: 33.7
coord: 6..92
e-value: 1.2E-17
score: 63.2
coord: 100..195
e-value: 1.3E-15
score: 56.7
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 3..88
score: 16.399
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 205..259
score: 10.156
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 101..194
score: 17.75
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 3..258
e-value: 1.5E-58
score: 197.3
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 4..258
NoneNo IPR availablePANTHERPTHR24089:SF5SUBFAMILY NOT NAMEDcoord: 9..259
NoneNo IPR availablePANTHERPTHR24089FAMILY NOT NAMEDcoord: 9..259
NoneNo IPR availableTMHMMTMhelixcoord: 5..23
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 163..185

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000006788 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000006788EMLSAT00000006788-702635Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000006788 ID=EMLSAP00000006788|Name=EMLSAP00000006788|organism=Lepeophtheirus salmonis|type=polypeptide|length=259bp
MSKDSIVDFIAGSLGAIVGVYIGKPLDTLKVKMQAFPHLYPNLVTCCKET
WNKEGVVRGLYAGTVPSLVGNVAENSVLFAAYGICQNLVAKKVGRCKVDE
LTIFHNGTAGFMAAFWSSIVLCPTELVKCKLQTMREVSSLKGLPPPNLGP
FLMTKHILKQNGVPGLFVGLTATFMREMPGYFAFFYSYELSREMMRPLGK
TKEEIGSAKTILAGGIAGMTLWILVFPVDVIKSRLQISGFNTSMYRMMAD
IARNEGIFA
back to top
Add to Basket