EMLSAT00000006881, EMLSAT00000006881-702728 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006881
Unique NameEMLSAT00000006881-702728
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s389supercontigLSalAtl2s389:580695..584330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006881 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006881EMLSAG00000006881-689647Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030223EMLSAE00000030223-739151Lepeophtheirus salmonisexon
EMLSAE00000030224EMLSAE00000030224-739152Lepeophtheirus salmonisexon
EMLSAE00000030225EMLSAE00000030225-739153Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778736auto778736Lepeophtheirus salmonispolypeptide
EMLSAP00000006881EMLSAP00000006881Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006881

>EMLSAP00000006881 ID=EMLSAP00000006881|Name=EMLSAP00000006881|organism=Lepeophtheirus salmonis|type=polypeptide|length=202bp
MGVIRSLVNVFVATIGVFIYFTAHTIYQVEVATPGAPSLDDWPVSFNKDK
IDGIVKSRQPLIAALKEFDSKSNWKSIITDDIVFEAPVLSITGANDFILF
VEKFTQYKSEFTVVESLGEYHNAQEILLDWNIKWGIEGLRNFNQHIRFRV
FIESPNKIFKIVEEWNGNPLLNEKTTNGFLGKFHSKFRMYTGQMLVMLMK
IK
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mRNA from alignment at LSalAtl2s389:580695..584330+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006881-702728 ID=EMLSAT00000006881-702728|Name=EMLSAT00000006881|organism=Lepeophtheirus salmonis|type=mRNA|length=3636bp|location=Sequence derived from alignment at LSalAtl2s389:580695..584330+ (Lepeophtheirus salmonis)
GCAAAATTAACCTCATTTTTTTGTCGTATATCAGATTATATGCCTGGTTT
GCTGCATACTTTTTCCATAATCGGAACTTGTTCTCTCTCAGTTCTCGGAT
GACATCATAATAGTAAAAGTAAATATCTTTGGTATTTATTGAATACTTAC
ATATAATGGGGGATGTGATAGAATGACCTTACTCATTATATTTGGATTAA
ATTATACATTGTTAAATTTTTAGAACGACTTACTCAATAACTAGGTACAT
ATTTTAAGATTGCTTCTAGAACAGAGGTAATTTTAATTAAAACTAAGATC
TAAAAGTTTTGTGTACATACATTTTACAGAGACCTAATTCAGAAAACTAA
AAGTTGATTTCAGGAAAAACTTATAGCATAACAAATTAACTATTTTTTTA
AATTATATAATGAAACATTGAAACGGGTAATATAAAGTTATATATTGTAT
TTTTTATCGTCTTTTATGTAAATTAACCTTATGTAGAAAAGCATAATTAC
TCTAGCATTAACTCTGCATAAATATCACTTTTAACATATATTCGAATTAC
CTAATATATTATTAAAAAAGTTTAAAACAAAAACTTTTTAAATATTTTTA
ACAAACAAGAATTAATAATATAAGATCAAAAATACCGGCTCTTTTTCTAT
TTATATTTTAGTTACTATAAGATACAACATGCAATTGAGTTATTAATTAT
CATCAATTTAGTTTTATGTTGTGAAAAATAAAAAACCCGTTGTTTATAGT
ATTAATTATTCGTTTGAAATTGATCAACCTTGCCTAATCCATTACTTCTG
TGCCTCTCATACTTTTTTTTTCTTCTATTCTCTTGGCCAATTAATAAAAT
AAGTAACAAAAAACACCCAGGACCGGGTTTAAGGCACTGGTACAGGTGCT
ACATGTCAGACTAAAATCTTGTTGTCAAATTGGTTTTGTCAAAAAATATG
AAAATATTGTAAAAATTTGGTCACAATTTGAAATTAATAATATTCATTGT
TGTCATTTTTTATTTTTTTTTTAATTTTTCTTTGAATGGTCAAAAAAAGC
TTTAAAAAAACATTCTGTCAAAAAGTGCCCCTTTTTTTTAAAGGACCTAA
AAAAATAGAGATAATTTTTTTAATATGTAAAATTTATAACACATATTTTT
ACTTACGCTAAAACGGCTCCTGAGCAAACCGTTGTACACATTTTTTGGGT
CTTATTTACCTATAAATAACATAAATGTTGGAACGCAATCAGTTATTCTC
CTTAGTGCACAGGTTGAGAAATAATGGACCAGCACTACATACTCCTAAAG
AAACTAAATTTCTTCAGTACGAGTTGTACGACATTTTTGATCAATTATTA
TCTTTAGAGAATATTAATTTACATATAATTATTAATAAGTGATTTAAATT
ATGATTCTAATAATAATTTCAGTTTTTATTTGTATTATTGTGCATTTAAT
CAAAATCTTGAAATTGGCTTAATTGTGTGAGCTACCCAACTTTTACTGTC
GGTTTTTAATTTGTTTCTAGATGCAGTTTTAGCATTCAAAGAACCACTAA
ATAAGGACTTGACTGATATATTAGGAAGTCGATTAATTCGACCAATTACA
GGTAGCTTTCAGTATTTAAACATTGGTTACCAAAATTATTTATTACCCAT
ATTTTAGTTCCATATATTTCGAGATCCACTTTTTAATAATTGAATAAGCT
AAATCAAGAGTTTTTTTTTGCAAAAACAACAACAACAACAAATTATTTTT
TTAAATTATTTAATCATTGAAATCACAAATATGGTTGGTATATCCATTTT
TGAAAGTTCTGTCAACCTTGGTATATATTTTTTACTTTGACAATCAATTT
AATCTAGGATCAACTATTGTTATTTTTACGATTTTTTTCAAAATGAATCG
TCTTTATTTGCCAAAGAAACAACAACTAAAGACTGCACAAAATTCTATGT
TTTGCCTTAAATAAAATAAAACTGAATCATCAATTCAAAAATGATCATAA
GTTAAGTTCTAGGATGATCAAAATATTGGCAGATAATGCCAGTCTTGAGT
AAAATTATGCACTTGCCGATGTGGGCATGATTGGAGTTTAATTCAATTAT
GTTTAATAGGATCTCAATTTTTTTTGAAATCTTGAATAGTAAATATTGGT
CCATAAAATTCGATATGGATCGCACCCTAATTCTAACATCTCCAATTTAT
CTATTAATTATAGATAACACTTTGGTGCAAGATAAATAACAGAATTGGGG
AAAATTGCTTATACTGTAAGTCGTCCAAATCAAGTCTCGAGTCCAAGAAG
TTCCGTCTTCTGATAAATAGGCTAGATATATCAATACATATATATTATTT
AATGACATAAATCATAATAGAGCATATTTAAACCAATTAAAAATAAGATG
CAATGTGGCTTMAATACCAATTATCTCCAGATAATCCATTTTTGTATGAA
TATAATATTATTCTCCAATGTATGTATTTAATATATATTACAGTTACTTT
GTTTATCTTTAATTATAATAAAATAAGTTTGTATTTGAATTCATTTTAAT
AAATAAATCCATGGCACTATGTGTTTTTTTTTAGAAAGTTGCGCAACTGA
ATTCAGTGAGTAATAAAGGAAGAGAGAAAATTAAAACTTATCTCCGTCCG
TATGATGTCAAAATAGTATTGATATTATGTGTACATAGAGACAGTTGATC
GGATATTATGTTTTCCATATTACATATTCCATGTTATCAGCTGAAAAATA
CAAGAGAGAAGTTGAAGTTGAAAGAGAGAGTTTCCTGTTGGTTTCCTGCT
ACATCGGCTTCTGAATAAATATTATTATTGTAATAATTATTTCATTATTT
CATATTTATCAAGCTAATACAATATTATCAAATCATGGGAGTTATAAGGT
CATTAGTTAATGTTTTTGTTGCAACTATCGGTGTCTTCATATACTTCACT
GCTCATACCATTTATCAAGTTGAAGTAGCTACTCCKGGAGCTCCTTCGTT
GGATGATTGGCCCGTAAGCTTTAATAAAGATAAAATAGACGGTATTGTAA
AGAGTCGGCAACCCTTAATAGCAGCTCTCAAGGTAATCTTTCAAATTATA
TCAAAACATTGCATTTGTTTTATCTATTATTCATATTTTAGGAGTTCGAT
TCAAAGTCAAACTGGAAATCTATTATTACTGATGATATTGTTTTCGAAGC
TCCAGTGTTAAGCATTACAGGAGCAAATGATTTTATTCTATTTGTTGAAA
AATTTACGCAATATAAAAGTGAATTTACTGTTGTTGAATCACTAGGAGAG
TATCACAACGCACAAGAAATTTTACTTGACTGGAACATCAAATGGGGGAT
TGAAGGACTTAGAAATTTTAATCAACACATTCGATTCCGTGTATTTATTG
AATCTCCCAATAAAATATTTAAAATTGTTGAGGAGTGGAATGGTAACCCT
TTGTTGAATGAAAAAACGACTAATGGGTTCTTAGGAAAATTTCATTCCAA
GTTTCGTATGTATACTGGTCAGATGCTTGTTATGTTGATGAAAATTAAAT
GAGATTATAGAAGTACATTTTCGATTATTTTAAATTAATTATTCTCTATT
ATATATATCTTTGTAGAATAAAATATATTTTTGTAT
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