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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s390 | supercontig | LSalAtl2s390:414906..420715 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006900 >EMLSAP00000006900 ID=EMLSAP00000006900|Name=EMLSAP00000006900|organism=Lepeophtheirus salmonis|type=polypeptide|length=736bp
MKKNSIEEYXKLEDENRTIKEDFELFKDKAELRIEDFQITLQNAMDTSEA
LLAKNKELKSKISLLESEVSVLGSLSSPCGKERQKDILPDMSVLETKEFE
NVEHKIITEELDNVRKVLEEKDTIIKTNNKSLSERDKEIEKVHARISELK
CGLHKSDKEISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYEK
KENERSSIDEKLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRK
EKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTD
VANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKN
QLNSKEREENMIEILKEELDSKNLEKNKLLDKISQLESKVIDASQLSELQ
LKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKXEST
RIRDVIIRSSPTKNNVASSLKNELEKKGXTIKILEEQVQQSLDVNVETQE
NSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQI
GLTSNISDDSLQKSMLEADESLNVSVEISSKIKTKKKGRVRSARKKSRIS
ESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLSVRKPRR
KYVNMEDNFKETPRKGRSTLKNVGNSDISIDNSIPIPTPRRSTRKTLYNP
GKLEVFSPVQDLEESNSSPHTIVKRQLRARKKKLAS back to topmRNA from alignment at LSalAtl2s390:414906..420715+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006900-702747 ID=EMLSAT00000006900-702747|Name=EMLSAT00000006900|organism=Lepeophtheirus salmonis|type=mRNA|length=5810bp|location=Sequence derived from alignment at LSalAtl2s390:414906..420715+ (Lepeophtheirus salmonis)
AAGTGAATGAAAAGATTTGAATGAAAAAGGAGGGATTTGATTCGACTTGG
AGTTGCTACACAGTTCTTAGTTGAGAGTTGGTGGTTGTCGCTTGTGGGAG
TTCTCTTGGAGTGAGTGGATAAAGAGGAAAAAATATGGAGAAGGGATCGC
CKCCATCCATTTCTTCAGAGACTGGAGTGGAGAAGAAGCCGAGGGGCCTC
CGGGTCTACGCGCGCCTCAAACCCCGACTGGAAGAGGAGGAGGAAGAAGA
ATTCCGGAATGTGAAGACCCGTTTTACTTATATGAAGAATGAGATCTTGA
CGGATCCCCAAGGAGGAGTGGATTTCAGTCAACACTTTGAATTTACCCGG
ATTTTCGCTCCGAACGTGGACCAGTCCTCTTTTTTCCGTGAGATGGTCCT
TGAGAGACTGGAGGCCTTTTTGTCGGGGGAGAACCAGTTGATCTTCACGT
ATGGAGCCACGTCCMCGGGAAAGKCTTTCACTGTGCAAGGCKCTCCTGCC
AGTCCTGGGATTTTGCCGCGCTCTCTGGATCTCATCTTTAATTCCCTTGG
AGTAGAGCGCTTTCTGGATCGGAGTCCCCTTCTGCCCCACGGCTTCGACT
CCGTCCAGATTTCCGCGTGTCATGATAAGTTGGAGCGAGAGAAGAAGGAA
GTGCTGAGCCTGGGGCGGTTTCTGAATACTCAAGTGGAGGCGGAGYGMGA
ATCCGGGCTGAGTGAGTGCGACAGCATCTGTACGGACGTGAGMGCTCAGA
GTCTGGCCACCATGTTTCCGAGTCTTGGACATCGAGAAAGAGAAAATACT
AAAGTGAGTAAGGTGGATCGAGAAGGAGTCTACTATTCATTATGGGTTTC
CTTTGCGGAAATATATAACGAAAACATTTATGATCTTTTCCAAAAAATAC
CTTTGCCATCCAATAAAGAAAAGGTGAGAAGATTACCTCTAAAATTAGCT
GAAGATCGGAAGGGAAGTATATATATAAAAGGTCTGAAAGAAGTTCAAGT
CTCCTCTGCGGACGAGGCCTACCAACTTCTCTTAATTGGTAGAAAGAATC
TGCAATTTGCTGCCACGAAACTCAATCATAACTCCTCAAGAAGTCATTGT
ATTTTTACCATTAAAATGATGAAATTTTGTGATAGCAATGAACCAAAATA
TGGTCGTGTTAGTATTTTATCTTTTTGTGACTTGGCAGGSTCTGAGCGTA
WTTAAAAAAACTCAAAATGATTTAAAAAGACAGAAAGAAACTGGGAACAT
AAATACTTCACTTCTCGTGTTGGGACGTGTCATGAAGGCGTTGAGAGATA
ATCAATACATAAAGGATTTGAAAAAACATTCTGTCGTTCCCTTTCGAGAC
TCAAAGCTTACTCGTTTACTACAGGTTTTCTTCAAAGGACTGGGACAGGC
ATCTATGATAGTGAACATAAGTCAAGCTCCATATCTATTTGATGAAACTC
TTCAGGCTCTTAAATTCGCTGCGATTACCAGTAAAATTAAGTATGTTAGA
GAATTTAAAACACCGAAGTCTAAGAGAAGGTCAACATTTTCTTCCATTTT
ATTTGAGCATAAGAGAACATCTAATTTATTTGGAAGAGGCTCTATTGCTT
GGGAAAATCCTATAATAAGTTCAACAATACAACATCCACAGATATTAAAT
GAAGAAACAGAAGAACATGAACAAGAGGATGAATCATCCCTGATAAGCAA
TTCTTGCCCAGATCAGTTTGAAGCACTTACTGATCTAGTCACTCAGCTAA
GGCAAAGACTAAATGAAGAGATGGATAAAAATATGACTCTAGAGACTGAA
ATTCGATCTGAATTATGTAGTAAATTTGATACAATGATGCTTCAAAATGA
ACAACAATGGCAAAAACGTCTCCAAGAATCAACGGATCGTATTGAAAATC
TTAGCTCATGGAGAATTACTCAGTTAGAGAATGCCTACAATGAGTGTCGC
AAACGTAAAAGGTATGAACAAACGGATGAAGATAATTCAAATCGTATTGC
CACATTAGAAACTGCACTTGATGTTAAAATTACTGAACTTGGAGAAAGTG
ATAAACAGTTTAAGGCAATGAAAGAAACGTATAATTCTCTACTTAGCGTA
AAACAAAAACTTCAAGAAGACCTTACGTTTTTTAAATTTGAAAATCAAAG
CTTCAAAACGAGAATACAGCGTTTAGAAGATAAAAATATTGCACTTTCTC
AAGAGAATAAGAGTAAAGACTTAGCAATTGAGTCTATGTCCACGAAACCC
ATACTAATTGATTTGAGAAACCAGTTAAGTGATACTAAAAATAAACTCTC
AAAAAAGAATGAGGAGGTGTCTTACTTTAAAAAGCTTTTAGATGAAGCTG
GGGAAGAATTTATAGCTAAGGATGATGAATTGCAGAAGATGACTTTGGAT
ATAAGCTCGTTAAGGGTAATATTAATAAAAATTTCACTTGTAAATTTATT
ATATTTGTTTTATTTTTAGACTGAATGCACTAAGTTAACACTGGCATTAA
GAGACGCACAGCACGAATACTCTATTCTTATTTCTGAGTCTAATCATCGT
CAAGAAGAGAAAGAAAATTTAGAAGAACAAGTGATAAACTTTCGTACGGA
GGTTACGGAGTTACTTGCTGAAAAATCTAACTTGATTTTGGAGCTAAGTA
ATCTTAAAAAAGAAAAATTAACTAGTGGTCAGAAACTTGAACGTAATGTG
ATATTAAAAGATTCTGAAGAGAATGAAAAAGAACTCAATCGAAGAATATT
GNAAACTTGAGGATGAAAATCGTACTATCAAAGAGGATTTTGAACTTTTC
AAAGATAAAGCAGAATTGAGAATTGAAGATTTTCAAATAACGTTACAAAA
CGCTATGGACACTTCAGAAGCTCTTCTAGCAAAGAACAARGAATTGAAGT
CCAAAATTAGTCTACTGGAGTCTGAAGTTAGTGTCTTGGGTTCACTCTCC
TCTCCTTGTGGCAAAGAGAGACAAAAAGATATTTTACCGGACATGTCTGT
TCTTGAAACTAAAGAATTTGAGAATGTTGAACACAAGATAATAACTGAGG
AACTCGACAATGTTAGAAAAGTACTTGAAGAGAAGGATACAATAATTAAG
ACAAATAATAAATCTTTATCTGAAAGAGATAAAGAAATTGAAAAGGTACA
TGCAAGAATTTCTGAATTAAAATGTGGTCTGCATAAATCAGATAAGGAAA
TTAGCTCATTAAATAATAAAGTGGAAGAAAATGCATCGTATATTCAACAA
TTAGAAAATATAATCGTAGACAAGGACTATGAAATAACTTTAGCTGAAGA
AAAAATCGCAAACTACGAGAAAAAAGAAAATGAGAGGAGTAGCATCGATG
AAAAACTGTCTTCTACATCGGAAGAACTGAAGAAAACTATCAAAGAGCTT
GATAAATACAAAATAGTTAATGAGGAGCTCGAAAAAAGTTTAAAGAAGAT
ACATGATGAAAGAGACAGGAAAGAAAAGGATTTAAATGATGAAATCGAGA
GTTTAAGGCAATCCAAAGTTAAAATCAAAGCCTCAGATGATGAAAAAACT
AAGCTTTTGTCTGATAAAGAACTTGAAATTAGTAGCCTTCAAAAAGAAGT
TAAGCATTTAATTCAAACAGATGTGGCAAACCGTCAAATGATAGACAATC
AAAATTCAGAACTCAAAGTACTAGAAGTTCAAATTAAAAAGTTGAATGAA
GAAACAAAAGACTGTAAGGTTCTTGGTAAAAAAATTGGAGAGCAACAAAA
TCAAATCGACTCTCTCAAGAATCAGGTAATTTATTAATTTAGGTATTGAC
ATATAAATTGACTGGTCCATATTTTATTTATTTCGCAGCTAAATTCAAAA
GAAAGAGAAGAAAATATGATTGAGATCTTAAAAGAAGAGTTGGATTCCAA
AAACTTGGAGAAGAACAAGTTATTAGATAAAATATCCCAATTAGAAAGTA
AAGTCATTGATGCATCTCAGTTGTCTGAATTGCAATTGAAAATATCGCAC
CTTGAGGAAGAAATCCACTCAAAAAATGAAGAAATACGTCAAGCACGTAA
TCAAAGGGAGGCTACTATGTTCACTTACTCAAAGGCATTTAAAACCAAAG
AAGAAGAAATATCTAGATTAAAGKAAGAATCTACTAGGATACGAGACGTT
ATTATTAGATCCTCTCCCACAAAAAATAATGTGGCTTCATCATTGAAAAA
TGAATTGGAGAAAAAAGGGGMAACCATTAAGATATTGGAAGAGCAAGTCC
AGCAATCATTGTAAGATCGCTTTTGTGCTTGATTACTATTTTTCTCATCG
AATTATTCATTGATCCTTCTTTTCTCTCTTTCTTTTTTAAGGGATGTCAA
TGTAGAAACTCAGGAAAATTCTCTAAAAAGTGAGATTGACAGTCTTAAGT
GTCAGATTTCAAGAGCCAACAATAAGCATTCACGTGAAATTGAAAAGATA
AAAAGAACAAATGGTAAAGTTATTCAAGAGTATAAGGATGCCAATCGCGA
ACTACAGAAGCAAATAGGATTAACATCTAACATATCCGATGATTCATTGC
AAAAGAGCATGCTTGAAGCTGACGAGTCACTAAATGTTTCAGTTGAAATA
TCGAGTAAAATCAAAACGAAAAAAAAAGGTCGAGTTCGTAGTGCTCGTAA
AAAATCAAGGATTAGTGAATCATCAACCCTTTCTCCAATATCTTCTACTT
CGGCGAAGGGCAATTTTGATAATAATACTGAGGAGGGCACTGAAGGAGAT
GAAAATATTCCTTACAACACGCGCAATTCTAGTCAAATTACTCTGTCAGT
TCGGAAACCTAGAAGAAAGTACGTTAATATGGAGGACAATTTTAAGGAGA
CGCCACGTAAAGGACGAAGTACTTTGAAAAATGTTGGTAATTCTGACATA
AGTATAGACAATTCCATTCCTATTCCTACACCGCGCAGATCAACTCGAAA
GACGCTTTATAACCCTGGAAAACTAGAGGTACCTTTTTATTCTTTTAAAT
GTTATTTTATGAAGTAGGAATTACTATTCTCTATTTTAGGTTTTTAGTCC
TGTCCAGGATTTAGAAGAAAGTAATTCATCTCCTCACACGATAGTTAAAC
GTCAGTTAAGAGCACGAAAAAAGAAGTTAGCTAGTTAAATATTTATTCCT
GTTTGCCATACTTACATCAAATAAAAATGTACAAATATAAGTCAACGGAC
ACGTCCACACAACGGGGTAATTGTGCTACTACAGCAGATTCTTAAACCTA
GTTTACATTAAAATTTTGTTCAATGATATTTTACATTTCATAAATTTTAA
AATACGAATTTGTTCGTTTTCCTCATTCATGGCTTAATGTCTCTCGTAAG
ATAGGGTGGAGCNNTCCTGTTTGCCATACTTACATCAAATAAAAATGTAC
AAATATAAGTCAACGGACACGTCCACACAACGGGGTAATTGTGCTACTAC
AGCAGATTCTTAAACCTAGTTTACATTAAAATTTTGTTCAATGATATTTT
ACATTTCATAAATTTTAAAATACGAATTTGTTCGTTTTCCTCATTCATGG
CTTAATGTCTCTCGTAAGATAGGGTGGAGCATCTATTGATAAGATGGTCT
GCACTTTGCAATTCTACCATACACACATTGGACGTTGAGCTTATGTACTT
CAACTTGCTTGGGCGGGCTTGAAAAGGGCCATGCCCAGTGTATGCTTGAA
CAATGAGTCCCAATTTTTCTCTTCCAAGCTTCATACACTTCCACTTAGGC
TTATTAAGTATAGTATGTGTATGTTTCATACTTTGATATTTTCTATATCT
GTCACACCAA back to top
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