EMLSAT00000006940, EMLSAT00000006940-702787 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006940
Unique NameEMLSAT00000006940-702787
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s393supercontigLSalAtl2s393:593053..595744 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006940 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006940EMLSAG00000006940-689706Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030495EMLSAE00000030495-739423Lepeophtheirus salmonisexon
EMLSAE00000030496EMLSAE00000030496-739424Lepeophtheirus salmonisexon
EMLSAE00000030497EMLSAE00000030497-739425Lepeophtheirus salmonisexon
EMLSAE00000030498EMLSAE00000030498-739426Lepeophtheirus salmonisexon
EMLSAE00000030499EMLSAE00000030499-739427Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778782auto778782Lepeophtheirus salmonispolypeptide
EMLSAP00000006940EMLSAP00000006940Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006940

>EMLSAP00000006940 ID=EMLSAP00000006940|Name=EMLSAP00000006940|organism=Lepeophtheirus salmonis|type=polypeptide|length=261bp
MLMNGMNSTMTTSPPLYSNGNEDIPNDPGKMFIGGLSWQTTPEXIREYFS
QFGDLAEVMVMKDPATRRSRGFGFITFCEPEAVDKVLGLSLIVHTLGPLI
PLLFFQDVVDKICEIHFHDINGKMVESKKALPKEPRPNFYGGYGHHPFSN
PYIHHPQRPGTIPHQGTNYFNRFSMYRPYNGNGGNPSTSDPFLYDNSPRY
SDQGGLPRNYNNNHMNGNNGGGGGNGGGSNGEVEYLHHYTNLVSLNEKGV
IRRVLVMILNM
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mRNA from alignment at LSalAtl2s393:593053..595744-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006940-702787 ID=EMLSAT00000006940-702787|Name=EMLSAT00000006940|organism=Lepeophtheirus salmonis|type=mRNA|length=2692bp|location=Sequence derived from alignment at LSalAtl2s393:593053..595744- (Lepeophtheirus salmonis)
ATGCTCATGAATGGAATGAATAGTACGATGACAACGAGTCCGCCCCTCTA
TTCCAATGGGAATGAGGATATTCCCAATGACCCAGGCAAGATGTTCATCG
GAGGCTTGAGTTGGCAAACGACGCCAGAGKCCATCCGAGAATACTTTTCT
CAGTTTGGGGATCTAGCAGAGGTCATGGTTATGAAGGAYCCTGCCACAAG
GAGGAGCAGAGGCTTTGGATTCATTACTTTTTGTGAACCAGAGGCTGTGG
ATAAAGTTTTAGGTCTTTCGTTAATTGTCCATACTCTGGGGCCACTCATT
CCACTCCTCTTTTTCCAGGTGTCTCACATACTTTGGACGGAAAAGTTGTG
GAGCCCAAAATTGCTGTTCCCAGAAAGTCGAATCCCAAGTTTGTCATGAG
GACCAAGAAGATCTTTGTTGGAGGCCTGAGTGCCTCTACAAGCCTGGAAG
ATATTAAGGCTTATTTTGAGCAATTTTGCACAGTCAAGGATGCCATGCTG
GCATTTGATAAGGTTACACMCCGCCACAGAGGCTTTGGATTCGTTACTTT
TGATAATGAGGATGTTGTGGACAAGATCTGCGAAATTCATTTTCATGATA
TCAATGGTAATCCTCGAACTAAATAGACCACCTCTATTATTATCTATAAT
TATCATTTGTTTATACAGGCAAAATGGTAGAGAGCAAAAAAGCCCTACCC
AAGGAACCTCGTCCTAATTTCTATGGGGGATACGGTCATCATCCCTTCAG
CAATCCCTATATCCATCACCCACAGCGACCCGGCACCATTCCTCATCAAG
GGACTAATTATTTCAATCGTTTCTCAATGTATCGTCCCTACAATGGAAAT
GGGGGAAATCCCTCCACATCAGATCCCTTCCTCTATGATAACTCTCCTCG
CTACTCGGATCAAGGAGGACTCCCTCGCAATTACAACAATAATCATATGA
ATGGGAATAACGGAGGCGGGGGKGGAAATGGGGGAGGAAGCAATGGAGAA
GTGGAGTATTTACATCACTACACCAATCTCGGTAATACCCGAAATGTTCC
TTCMCGCTCCAKGGATGCCGCTGCTGCTSCTGCCATATATGCTCAAAACA
GCTACAGAGTATCCCCATTAAATAATAATGGCATCATTGCTGCAGCAGCT
GCTGCTGCGAGGTCGTCAAATAACAACCATAATAATAACTTGAATAATCA
AATCCATGTCCGAAACAACAACTATTATCTTAGTCTTGATAATTATATTC
ACAACAATCAAGAAAACGGAGAGAGTTATGAAGAAGATTTTCCAGAGTTG
ACCTCAAAGTTCTCTNGTTTAGATTCGACGGTCAGGATGAGTCCAATAGT
TCCTCTTCTCCCAACACCTCTGCTATTACCACCATTAACAACAGCAACAG
CAATAATGTCAATAACGCCAACCACTACGGATTTTAAAATCCTCAATCCC
CAATTTAAAAATTCTAAAAAATTATTATTTGATTCTTTCATTTGCTTACA
AACATACATCATTGAAATTTGTCTTTTTTTTTTCTTCCTGTTATTTTTTT
TTTTTTTTTCTTTCTTTCTTCCTTTTCCCTTCCTTTTTCTTCATAGTTTC
TACAATAGTAAAACAAGTCAACTTTTCTTCAACAATTTTTTTTTTTTTTA
CATTCATGCGTACAGTGTAGTGTTGTAGTAAGACTCATTAGTTTAGAAAA
AGGTTTCAATCTTTATATAGGATATTATTTATTATTATCAAAATCTGTAT
AATTATTATTTTGTGCTTTGAGAAAAAAAGGAAAAAAAAATCACTTGTAA
AGACGAAACGGCTTCAATGTCCGTGTACCTGATCTTTATTTATATATAAA
TACATACTTTTTTTTTAAAGTTTCATTAAATGAAAAAGGTGTAATTAGAA
GAGTAGTAAGAAATAATTTTTTTAGAGACAATCATATCCCGGCCATTTCA
CTTTTGTTTTGTTTTGCTTTTCTCTCTCCTTTACCAAAATAGAATTTCAT
AGCTTCTATATAATGTTATAAGTAAAATCACAAAAAATCCTTTCATTTTT
AAAACTAATTTTGCATGGTGTAATGTGAAACGCGAACAAAGTTATTTAGT
TAGTACACAAATCAAAGATTAATATATATAGAAAGCATCTTGCGCAGAAA
TAAATATACTCTTGCATGTAAAATTTTGTGCCTTTTTCTCGCATTGTCTT
ATTAATTATAATTGTCTATTATATTAATATTCGAAATGATCACACGATTT
CTAAAATGAAACGTAACCATATTAAATGTATGCGTATTTAATTAATTAAT
TTTATTATAATTGTAATGTCTCGCTATGAAGATGATAATTTGTGATAATT
TCATGTCGCTTTTTTTTCTTTTTTTTCTGTTTAAAAAAAATATCCTACTA
AAGTAACTAAAACTTTTTGCACAAGAAGAACTTGTGCAGTCCTTTCGCTC
TTATGGTATGAATTGTTTGGTATAAGGCTGTTCATTGTGTTACTTACTTC
TGTAAATCTATACACTTTATTATATATGATAATTGTATGTCTCTCAACCC
GCCAAAGAACGTATATATAATTATCAGAGAACAATCGATTATTAATGACT
TTCCCTTTAGAAAAAGGGTGTAGAAATGTTTAGGGAAGTTATTTTAATAA
TTACTAATATTATTTTAGTTAGTTATGATCCTTAATATGTAG
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