|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s398 | supercontig | LSalAtl2s398:298493..302406 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000007004 >EMLSAP00000007004 ID=EMLSAP00000007004|Name=EMLSAP00000007004|organism=Lepeophtheirus salmonis|type=polypeptide|length=500bp
MNDTYELQLNPRNWTDPPLDIYFLIDATKSMEKYKQSISEQIGILNSTLG
NLTTNCHFGFGEFGEKPLSPYISTIPSKLNKPCAGCEASFGFKNHLSLSR
NISVLRDLITDSPLIGNIDHPEATLDGIMQALVCTEEMGWRKNSIKLLII
ITDAGFHIAGDGKLGGIVGPNDGKCHLNSQGEYTSSTKQDYPSIGHVNYE
AYNRSIQLLFQVSSDQIDFYNSLKDVFNGSKVVLLEEAPSKAAAFVFEQI
HDIISSTEFSDNSTDLFSISYSSASNLTVDIIAPSCPKDLWARNHVIQIT
SKGIQESWLIVVELVCECDCENPGHSSYVESAEHCHFNGDLICGDCQCNL
VMGHGEHCETVCRDYEREDLLDQCRSSENSPVCSNRGVCECGSCFCRPRE
NRNERVYGQYCECDNFSCDRYNGILCSGNGVCECGRCKCRREWRVPGYDA
CECKASLSTFMNPFRKYEGEICSGNGNCVCGECKCEEGYSVFLNFIIYIK back to topmRNA from alignment at LSalAtl2s398:298493..302406+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000007004-702851 ID=EMLSAT00000007004-702851|Name=EMLSAT00000007004|organism=Lepeophtheirus salmonis|type=mRNA|length=3914bp|location=Sequence derived from alignment at LSalAtl2s398:298493..302406+ (Lepeophtheirus salmonis)
CCGTAACCTTTGTTCAAGACTGTGTTTGTGTTGACACACACCCCATTATA
TATAAATCATTAAATAATTATAATTTTAGGACTATACTGCTCCTCAAAGA
AACTTTTCAAAGCTTTCTAGATGTGATTTTTTTGAGCACCACAATTCCTG
TCAAGATGAATTTCTTTTCAATCCAAGGAACAAAGAAGTTTTGCGAGCGA
ATGTCTCAAATGAAGACGCAATTTCATCAAGCATTCAATATATAAAATTG
AGAATGAGTAAGTCTTCATTTGTGAAGAAGTCTATTTTGTACACAGTACT
AACAAANNNNNNNNNNNNNNATTTCCATCCTTTAAGATGATACATATGAG
CTACAACTCAATCCTCGAAACTGGACGGATCCTCCCCTAGATATTTACTT
CCTTATTGATGCAACAAAGTCCATGGAGAAGTATAAACAGAGTATCAGTG
AGCAAATAGGGATTCTAAATTCGACTCTTGGTAATTTAACTACAAATTGT
CACTTTGGCTTTGGAGAATTTGGAGAAAAGCCTCTGTCTCCATATATATC
CACCATTCCATCCAAGTAAACAAATGGATTTATGAGCAAAAGTACAATTT
ATCTTCTGAAAATATATATTTTAGGCTAAATAAACCTTGTGCTGGTTGTG
AGGCTTCCTTTGGATTTAAAAATCATCTTAGTCTTTCAAGAAACATTTCT
GTTTTGAGAGTATATACTTTTATTTAAGATATAAATAAATGTCTGCGTAC
GTCTTTACTTCCAGGATTTGATCACAGATTCACCCTTGATTGGTAATATT
GACCACCCTGAAGCAACTTTGGACGGAATCATGCAAGCTCTGGTTTGTAC
TGAGGAAATGGGATGGAGAAAAAATTCAATAAAACTATTAATCATTATCA
CAGATGCAGGATTTCATATTGCTGGAGATGGGAAATTGGGTGGGATTGTA
GGGCCCAATGATGGAAAGTGTCACTTAAATTCTCAAGTTAATACAATGCC
TTGTTTATTAATAACTATTATTAATTTCGTTTATTTTATACAAATTTACA
GCTTACAAAACAATTATTTATTTAAATGACTTCCTCAATTTCAGGGAGAA
TATACAAGCTCGACAAAGCAGGATTATCCATCGATTGGCCATGTGAACTA
CGAAGCTTATAATAGATCCATTCAACTTTTGTTTCAAGTCAGCTCAGACC
AAATAGACTTTTACAATTCTCTAAAAGACGTGTTTAATGGAAGTAAGGTT
GTCCTTCTGGAGGAAGCACCTTCAAAGGCTGCTGCCTTTGTATTTGAACA
AATCCACGTATAAATTTATCACTTCAAATATACAAATGTTTTTCATTTTG
AAAGTATTTATATTGTTAGGATATAATATCATCAACAGAATTTAGTGACA
ATTCAACGGATTTATTTAGTATATCGTATTCCTCTGCTTCTAACTTGACA
GGTAACTTTTCTTTAGTTCCATTTCACTACAATATAGACTCAATTACTTT
TAATCAAATGATTTTGTATAGTGGACATTATTGCTCCGTCATGCCCCAAA
GATTTATGGGCTAGGAATCATGTTATTCAAATCACCTCTAAGGGGATACA
GGAGTCCTGGTTAATTGTTGTGGAATTGGTTTGTGAATGTGACTGCGAAA
ATCCGGGACATTCAGTTATATTGCGATTTTCTTATAAGATTAAATTTATA
TTTATTTAAATTATAAAATGTGTAGAGTTATGTTGAAAGTGCTGAACATT
GTCACTTCAATGGTGATTTAATTTGTGGAGATTGCCAATGTAATCTTGTC
ATGGGCCATGGAGAACATTGCGAGACTGTATGTAGGGATTATGAAAGGGA
GGATCTTCTAGACCAATGTCGTTCATCCGAAAATTCTCCTGTTTGTAGCA
ATCGTGGAGTTTGTGAATGTGGAAGTTGCTTTTGTAGACCCAGAGAGAAT
CGTAATGAGGTAAGTCTGCATTCTTAAACAAATCGTAATTCAATCAAATC
AATGGGTCTCTTCAGAGAGTTTATGGACAATACTGTGAGTGTGATAATTT
TAGTTGTGACCGTTACAATGGTATTTTATGCTCGGGAAATGGAGTCTGTG
AATGTGGTCGATGCAAGTGTCGACGTGAATGGAGAGTTCCAGGTAAGTCC
TTTGTAAGATTCGTAAATGTTAAATTGATACAACATAGATTTATTGATAG
GTTATGATGCATGCGAGTGCAAAGCTTCGCTATCAACGTTTATGAACCCT
TTTAGAAAATATGAAGGAGAAATTTGCTCTGGGAATGGAAATTGTGTTTG
TGGCGAATGTAAATGTGAAGAAGGCTACTCTGTTTTTTTAAATTTCATCA
TTTATATTAAATAAAATATGAAAACCCTTCTGTTTTACCCACAAGAAATT
TTTGACAAGGCGAATTTTCTACAAGACGAGTTTTCCAGGAGCAAAATTTC
TGAATCCACAAATTTTCAAAGGCGAGTTTTCCTTACATAAAGAGTAAAAT
AATAGTTAATCCAATTTAAAAAAAATGTCTTAAAAATGCTTTAAATAATA
AATGTATATGAGTTAAAATATAATTACAATATTTCCCTGCACTAATGCTA
TTTAAATGTAAATGGTTCTCTCCTTTATAGCAGTTTTTCATGCCCCCTCC
ACCCCCCCCCCTTAAATTCTATAATCATATATGCAGCTGATATTTACAAG
GGCCTTAATTCAGTAGTTCCCATATTTATCATCTTTCCCAACTTCTCCAC
GCAATCTTTTTTCCATACAAAAATGTCAACTCTACTCATATTACATGTTA
TGTACTATTTTTCATCTAAATCTACAAATTAGTCGTAATTCAAAACTTGA
CCCATGATATATATTTCCAGACATGTCCAAGTCAATGTGAATTGCTAAAG
CCTTGCGTAAACTGCTACAATMCCAACGAAGCCGCATTCAATCAAGATGT
TGAAGTCTTCGGGGGAGACTGCAGGAAATGCTCTATGAATAAAGTATCTC
ATATAGAAAAAATGGATGATTTTGTTATTGGTCCAGGGGAACTCATTGTA
ATTTTTATGATGATAATTCATGTATTGTAGCTTTTGGCTATAAAAACATA
GATGGAGGAGATGATTTGAAGATATGGATTTGAAAGGGAAAATATTTGTC
CTTCGGGAGGGTGGATAAGTGCTCCAGAAGATTAAAAGGGTGGCAAATTA
GTTGAATAAATCAAAAATACTTGTAGCTAAATAGATATATACATAGTGTC
TTGACAAGTAATACGTTTATCAAAATGAATTATTGATTATTTATTTTTCA
CTAAAATTACATTACATTGTTGGAATTCCTCGTCTTTGTCTGAATCTATG
TCTCGACTACTAAAAAAATATTTAAATTTGTTAAATCTGAAACAATTTAT
ACCAGTGTAGGTTTGCCCGCTGTTGTCCGTGCATGAAGAAATAAATTAAG
GCAGAACTCCTTTGCTTAAAACAGAATAAAAAATAAAGGCTATAAAAATT
TTTTAATTATTCTCGTGTTGGTTTTATGAGTATGAGTTTACATATTCTTT
CCCGACATGAGGAATTAATTGATTTATTCTGGGTGAGATACCAAACTGCA
GTCTCCCAACCACTTCCCTGAGCATCAAGGAAACCTACCATTATCCCAAA
ATACACCCCAGCTCACAGATTGTCCAGGTAAAGAACTTGGTCTAAACTCT
ACGACTGTTCCGTTTCTAGGCACCAGAACCCTTCTAATATCCTATAATAC
ACCCCATTCCAAGGTTTGTGCAGATAAACTCCTAGGCCCGAGTCATGTTA
AATTTCTCTGCCACCACTTTCCTGAGCATCAAGAACCCCTCATAATATCT
CAAAATACTAGGGACACAGGAACCCTTCGAATATTCTATAGTATACCCCC
AACCGCGGGTTGTG back to top
|
